sp|Q9LD90|CBF5_ARATH ----> H/ACA ribonucleoprotein complex subunit 4

Intron 1 GTTGCGAGAG ... GTCTTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	13.64	25.3	3	4
A2	31.41	31	2	14
A3	46.97	5.7	4	5
A4	25	6	1	2
A5	6.39	14.7	0	1
A6	10.24	17.7	0	2
A7	12.65	27.7	1	4
A8	33.25	27	0	13
A9	9.39	19.3	0	2
A10	19.52	29	0	7

>TRINITY_DN116597_c7_g1_i7 from sample A3 / Example spliced isoform

GTTTCATATTTAAAGTCAATTTTCTTCAGTTTAACCCATATGAATCAAACAGATTCAAATTTTTTTATTTCCAAGCTATTTGATCATAGAAAAACCTTGATAAGTCAAAGCAATTAATTTTATTTTATAGGTCTGGTAGACTAGAGTTGGTCTCAGTGGATGGTGATCTTCATCATCATCGTTAATGTTTATGTGAACTT
ATTATGTGAAACCAACATGTGTGTAGGTTATTGAAAGACAACCATGGGAACACGTCAAAGATGATGACATTCAAAAAGCTGTGACATCATTTTATGGAGAAATATGGCAAGTCCCACCAATGTTTTCAGCTATCAAGGTGGGTGGAGAGAAGATGTATGATAAAGCGAGGAGAGGAGAAACAATAGATCTTCCGCCACGA
AGAGTTTTGATTTATGAATTTGATGTTCAAAGAAGTCTAGACGATCGACAAAATTTAATTTTCAAAGTCACTTGCTCAAAGGGGACATATGTGCGATCACTTTGTGCTGATTTTGGAAGGGCACTTGGCAGTTGTGCTCACCTTACGTCTTTACGACGAGATCAAATAGGTGGGTGGAGAGAAGATGTATGATAAAGCGA
GGAGAGGAGAAACAATAGATCTTCCGCCACGAAGAGTTTTGATTTATGAATTTGATGTTCAAAGAAGTCTAGACGATCG

>TRINITY_DN116597_c7_g1_i1 from sample A3 / Example unspliced isoform:

CAACAAATGACCAAAGGTAAGTCAATATGATTGCTCAATACATAAGTTGTGATATAAAGTTTGATTGCGAAGGCGAATCCTATAAAAGCAAGAATTGATGTTCCCCTAAATGATCTAAGCATGACTACCATAATGCCAAAAAGAAGAAATACAATGCTCTGGAGCCGAGTACAAGGGAAAGAGCCTCAATGTTCCAAAAG
CTCATTGTCGGACGAAGGAGAGAGGGGGTTCTCCTCTGAAGTTGAAAGGGAAGCTCTCCTACCATTCGAGGTTGAAGGAAAGAAATTCTGTATAGAAAACAGGCTGGAGGAATAATACAAAATCTGAAATAATATCATGAAGAAAATGAATATCAGAATGGGAAAATAGAGGTAAGCAATTTATCCGATCCTAGAAAAAT
TATTAAAATTAAAATTTCTTGACAATCAACATTGGCTTGCCTCCCTCTGTCTAATGCTTTTTGTCAGAATACAAATATATGAATATGGGGCAAACCGAAGATACAGAAAGTTAGTGTTCTTTTTGATATTCTTCTTTCATATTTGTTTTTGTTTTATCTGCTTGTCTGATAGTGTTTGAGGCCTAAAACATACTCTTACA
ATCTTTATTACTTTGACTTTCAAGTAGTTGACATTGCTCCTATGTTCTATGCCATTGGTAGGTGGGTGGAGAGAAGATGTATGATAAAGCGAGGAGAGGAGAAACAATAGATCTTCCGCCACGAAGAGTTTTGATTTATGAATTTGATGTTCAAAGAAGTCTAGACGATCGgttgcgagagatttaagtaaaaaattaaa
acgccctttcatattgtctttgcagACAAAATTTAATTTTCAAAGTCACTTGCTCAAAGGGGACATATGTGCGATCACTTTGTGCTGATTTTGGAAGGGCACTTGGCAGTTGTGCTCACCTTACGTCTTTACGACGAGATCAAATAGGTGACTACTCAGTTGCTGATGCGTGGAAGTTTTCAGAACTGGAAAATGAAATT
GCCAAGCATTATATTTAAGAGGGGCTGATGCAGGTGTTCAAGTGATGACTAAGGCAAAATATGGGCAACCCCAACATAACATATGATGATTTAATCTACTTGCTATTTATAGCCAGAGCCCATACTTGTCATAAAGGGGTTAAAGTGAACTTTAACTTTGTGACAGCCTAGTCACTTAAGATGTAGACCAACTTGTCATC
CCCACAACGCCACCAACTTTGTGTGGCTAAAGGCAAGTCGATCTAATTTTATTACAAGAGGTGCTATTCAATAAAGTGCACAAAAAGGAACACCCTAAAAGGCTAAACACCTATTGTAAATTACTTTTTTCAAGTCATTAGTTAAAGAAAGCAGTTGACACCCCCCTCCAGCAATAAAAGGGGGACAAGGAAAGCGGCGA
AAGGGAAAGAGATTTGTGTCAGCGGATTGTAATCACATAGGGAAATTTTGAGTAATAATAAAAGACATA