sp|Q94AI4|METL1_ARATH ----> N6-adenosine-methyltransferase non-catalytic subunit MTB

Intron 1 GTAAGAACCT ... CTTAGTACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	22.56	115	36	31
A2	26.26	73	25	27
A3	18.23	74	11	22
A4	25.53	70	17	31
A5	18.37	40	3	15
A6	24.95	182	62	59
A7	24.23	208	67	66
A8	27.06	217	73	88
A9	20.31	208	38	68
A10	31.28	134	64	58

>TRINITY_DN43416_c0_g1_i8 from sample A8 / Example spliced isoform

CTTGAAATGTGATCTGCGTGACACAGTGCTTTCGGGACCAAATTCGATGCGATTCTTATAGATCCACCCATGGAGGAGTATGTCCGTAGAGCTCCCGGGGTTCTGGATCCGGAGGACTACTGGACTTGGGAACAAATCAAGAACCTCCGAATCGAGGTATTGTCACACGAGTAACTTGGAACAGGTAGCCATTCCTTTGT
TTTTCTTTCGGCTGCCGTTGTTTCAAGAAGTGGGGATTTCTTGACTTAGTACAGTGGGGATTTCGAAGAGTTGAATATATTTGTTGGCTAAAGACAAACCATGAAAATCTAGCTGCGTCTGCGTCTGTTAATAATGACAGAGGAGCTTTATTCAAGCGCACCAAAG

>TRINITY_DN43416_c0_g1_i6 from sample A8 / Example unspliced isoform:

CTTGAAATGTGATCTGCGTGACACAGTGCTTTCGGGACCAAATTCGATGCGATTCTTATAGATCCACCCATGGAGGAGTATGTCCGTAGAGCTCCCGGGGTTCTGGATCCGGAGGACTACTGGACTTGGGAACAAATCAAGAACCTCCGAATCGAGGTATTGTCACACGAGGTATTGTCACAAAAACATTGCTTCTAGAG
TTCCCATTGGCTGTAAAGTATTTTGTATATGTAGGTATGGTGCGCTACAAATTTAGGGCTCCCACCTGTAAAGTACTTAAATCGTTGAGGAATTGATTGTTTTTTACGTTTTTTCATATGAATTTGGAATTTTCTTTTTTAGTAACTTGGAACAGGTAGCCATTCCTTTGTTTTTCTTTCGGCTGCCGTTGTTTCAAGAA
GgtaagaacctctacctggatcgctgattactgttcgttgtctcagttcaatcttgtaattttttaaataattttgttgtggtgccgaaggtcttaaagagggccgtcgttgtttcaagaagtaatcttttaaataaattaatttgtggaatctcatagatttctttacttagtacagTGGGGATTTCTTGACTTAGTAC
AGTGGGGATTTCGAAGAGTTGAATATATTTGTTGGCTAAAGACAAACCATGAAAATCTAGCTGCGTCTGCGTCTGTTAATAATGACAGAGGAGCTTTATTCAAGCGCACCAAAG

Intron 2 GTATTGTCAC ... TCTTTTTTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	30.08	141	84.7	36.7
A2	30.04	115.7	73	26.3
A3	23.76	129.3	66.3	14.3
A4	35.49	86.3	75	20
A5	30.79	63.7	51	5.7
A6	30.72	227	149	52.3
A7	33.15	320.7	243	75
A8	34.22	248.7	182	76.7
A9	23.7	312.7	149	45.3
A10	37.66	161.3	133	62

>TRINITY_DN43416_c0_g1_i7 from sample A8 / Example spliced isoform

CTTGAAATGTGATCTGCGTGACACAGTGCTTTCGGGACCAAATTCGATGCGATTCTTATAGATCCACCCATGGAGGAGTATGTCCGTAGAGCTCCCGGGGTTCTGGATCCGGAGGACTACTGGACTTGGGAACAAATCAAGAACCTCCGAATCGAGGTATTGTCACACGAGTAACTTGGAACAGGTAGCCATTCCTTTGT
TTTTCTTTCGGCTGCCGTTGTTTCAAGAAGTGGGGATTTCGAAGAGTTGAATATATTTGTTGGCTAAAGACAAACCATGAAAATCTAGCTGCGTCTGCGTCTGTTAATAATGACAGAGGAGCTTTATTCAAGCGCACCAAAG

>TRINITY_DN43416_c0_g1_i15 from sample A8 / Example unspliced isoform:

CTTGAAATGTGATCTGCGTGACACAGTGCTTTCGGGACCAAATTCGATGCGATTCTTATAGATCCACCCATGGAGGAGTATGTCCGTAGAGCTCCCGGGGTTCTGGATCCGGAGGACTACTGGACTTGGGAACAAATCAAGAACCTCCGAATCGAGGTATTGTCACACGAGgtattgtcacaaaaacattgcttctagag
ttcccattggctgtaaagtattttgtatatgtaggtatggtgcgctacaaatttagggctcccacctgtaaagtacttaaatcgttgaggaattgattgttttttacgttttttcatatgaatttggaattttcttttttagTAACTTGGAACAGGTAGCCATTCCTTTGTTTTTCTTTCGGCTGCCGTTGTTTCAAGAA
GTGGGGATTTCGAAGAGTTGAATATATTTGTTGGCTAAAGACAAACCATGAAAATCTAGCTGCGTCTGCGTCTGTTAATAATGACAGAGGAGCTTTATTCAAGCGCACCAAAG

Intron 3 GTAAGAACCT ... CTTAGTACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	23	265.5	36	79
A2	22.14	215	25	61
A3	23.91	246.5	11	77
A4	26.49	195	17	70
A5	24.91	145	3	48
A6	22.95	599.5	62	178
A7	22.7	748.5	67	219
A8	22.83	637	73	188
A9	23.39	894	38	272
A10	25.77	524.5	64	182

>TRINITY_DN43416_c0_g1_i15 from sample A8 / Example spliced isoform

CTTGAAATGTGATCTGCGTGACACAGTGCTTTCGGGACCAAATTCGATGCGATTCTTATAGATCCACCCATGGAGGAGTATGTCCGTAGAGCTCCCGGGGTTCTGGATCCGGAGGACTACTGGACTTGGGAACAAATCAAGAACCTCCGAATCGAGGTATTGTCACACGAGGTATTGTCACAAAAACATTGCTTCTAGAG
TTCCCATTGGCTGTAAAGTATTTTGTATATGTAGGTATGGTGCGCTACAAATTTAGGGCTCCCACCTGTAAAGTACTTAAATCGTTGAGGAATTGATTGTTTTTTACGTTTTTTCATATGAATTTGGAATTTTCTTTTTTAGTAACTTGGAACAGGTAGCCATTCCTTTGTTTTTCTTTCGGCTGCCGTTGTTTCAAGAA
GTGGGGATTTCGAAGAGTTGAATATATTTGTTGGCTAAAGACAAACCATGAAAATCTAGCTGCGTCTGCGTCTGTTAATAATGACAGAGGAGCTTTATTCAAGCGCACCAAAG

>TRINITY_DN43416_c0_g1_i6 from sample A8 / Example unspliced isoform:

CTTGAAATGTGATCTGCGTGACACAGTGCTTTCGGGACCAAATTCGATGCGATTCTTATAGATCCACCCATGGAGGAGTATGTCCGTAGAGCTCCCGGGGTTCTGGATCCGGAGGACTACTGGACTTGGGAACAAATCAAGAACCTCCGAATCGAGGTATTGTCACACGAGGTATTGTCACAAAAACATTGCTTCTAGAG
TTCCCATTGGCTGTAAAGTATTTTGTATATGTAGGTATGGTGCGCTACAAATTTAGGGCTCCCACCTGTAAAGTACTTAAATCGTTGAGGAATTGATTGTTTTTTACGTTTTTTCATATGAATTTGGAATTTTCTTTTTTAGTAACTTGGAACAGGTAGCCATTCCTTTGTTTTTCTTTCGGCTGCCGTTGTTTCAAGAA
Ggtaagaacctctacctggatcgctgattactgttcgttgtctcagttcaatcttgtaattttttaaataattttgttgtggtgccgaaggtcttaaagagggccgtcgttgtttcaagaagtaatcttttaaataaattaatttgtggaatctcatagatttctttacttagtacagtggggatttcttgacttagtac
agTGGGGATTTCGAAGAGTTGAATATATTTGTTGGCTAAAGACAAACCATGAAAATCTAGCTGCGTCTGCGTCTGTTAATAATGACAGAGGAGCTTTATTCAAGCGCACCAAAG