sp|Q8GXR9|NDC1_ARATH ----> Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial
Intron 1 GTAAGCAATC ... TGGCTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.81 | 22 | 4 | 9 |
| A2 | 38.46 | 24 | 15 | 15 |
| A3 | 21.95 | 32 | 11 | 7 |
| A4 | 42.86 | 20 | 12 | 18 |
| A5 | 23.08 | 20 | 1 | 11 |
| A6 | 7.32 | 19 | 0 | 3 |
| A7 | 16.5 | 43 | 7 | 10 |
| A8 | 3.7 | 13 | 0 | 1 |
| A9 | 19.08 | 53 | 14 | 11 |
| A10 | 11.48 | 27 | 2 | 5 |
>TRINITY_DN118738_c0_g1_i2 from sample A1 / Example spliced isoformGTATTTTGTAGACAATGTGGCGCGACAGCATCCACACAACTAACGGCACAACCGAGTTAAGTTCGAAGGGCGCATCGCACTATTCTCAAACCACCACTCTAGGTTAATCGGTTCAGCAGCTGTAAAAATGCCGTGTATGATGGTTTCTCTGCAAACGCCGCCCATAAATGGAAAATATTTGAGAGATCGAGAATGCTTGC
ATGGATTGCATTCCTCATCGCGCGTTGAGTCCAGGATAATCTGCAGAAGCTTTGTTCATCTAAACGCTTCAAGGATACTTATATCTGGTTGGAAGTTTCTGACCAAGGAGAGGAAAACTAAAGGCAAAAGTGATAGACAACTTATTTCTGAGTCCTTTTCAGGACACTTGCATACAATTGCATCTATGGGAGAGAGTAGT
GTTGGAGAGCCTGCTCAATCATATGAAGAAGATTCCCCAATGAGATTTTTTACATGGCCTGATTCAAAGGTGAGATCGCATGCCAGATTGTAACCTGACATGAATTTGGTATCACTTAGAGGCAGGAGCAATCTTTTTGTTTGTTTGTTTTGTAAGTGCTGTATATGATACTTCAAAAGTCAAATCAGTACATCAGGGCA
CAGAAAAATTACATCACTCAAATAACAGGGGTCCCGTGAGTAATCTTGAATATAGGAGTAAGCACAATTCTTGCTGGAAATATTTTTTGCTTACAAGTTTCACTGTATAAAGCTTTTATCCATTTTGTAGTTTAATGCTTTCCAACCAGTGCACTCTGTTCATCAAATATACAATGCTTTTCGGATAGACAGCTATTTTT
CGTGCATAATTCTCGGGCATCTCAGCTTTAGACTAGATATCGTTATAAGGATAATCTTAGTTTTTGTGCTTCGGGTTTGATTGTGACAAATTAACATGGAGGGTTTCTTTCTTTTATCCTATTATCCTGACCCAATGTTTTAAAACTCAGACTCGGTCTCAGAATCCGTTGATGGTCAACTCAGACTCCTATTTAGATTG
GTTTGAATTTTAT
>TRINITY_DN118738_c0_g1_i1 from sample A1 / Example unspliced isoform:GTATTTTGTAGACAATGTGGCGCGACAGCATCCACACAACTAACGGCACAACCGAGTTAAGTTCGAAGGGCGCATCGCACTATTCTCAAACCACCACTCTAGGTTAATCGGTTCAGCAGCTGTAAAAATGCCGTGTATGATGGTTTCTCTGCAAACGCCGCCCATAAgtaagcaatcatttacttactttcaaatttcct
agtacattcccgaccattcaaatatttcttttccgttggcttgcagATGGAAAATATTTGAGAGATCGAGAATGCTTGCATGGATTGCATTCCTCATCGCGCGTTGAGTCCAGGATAATCTGCAGAAGCTTTGTTCATCTAAACGCTTCAAGGATACTTATATCTGGTTGGAAGTTTCTGACCAAGGAGAGGAAAACTAA
AGGCAAAAGTGATAGACAACTTATTTCTGAGTCCTTTTCAGGACACTTGCATACAATTGCATCTATGGGAGAGAGTAGTGTTGGAGAGCCTGCTCAATCATATGAAGAAGATTCCCCAATGAGATTTTTTACATGGCCTGATTCAAAGGTGAGATCGCATGCCAGATTGTAACCTGACATGAATTTGGTATCACTTAGAG
GCAGGAGCAATCTTTTTGTTTGTTTGTTTTGTAAGTGCTGTATATGATACTTCAAAAGTCAAATCAGTACATCAGGGCACAGAAAAATTACATCACTCAAATAACAGGGGTCCCGTGAGTAATCTTGAATATAGGAGTAAGCACAATTCTTGCTGGAAATATTTTTTGCTTACAAGTTTCACTGTATAAAGCTTTTATCC
ATTTTGTAGTTTAATGCTTTCCAACCAGTGCACTCTGTTCATCAAATATACAATGCTTTTCGGATAGACAGCTATTTTTCGTGCATAATTCTCGGGCATCTCAGCTTTAGACTAGATATCGTTATAAGGATAATCTTAGTTTTTGTGCTTCGGGTTTGATTGTGACAAATTAACATGGAGGGTTTCTTTCTTTTATCCTA
TTATCCTGACCCAATGTTTTAAAACTCAGACTCGGTCTCAGAATCCGTTGATGGTCAACTCAGACTCCTATTTAGATTGGTTTGAATTTTAT