sp|Q9MUV9|FTSIH_MESVI ----> Peptidoglycan D,D-transpeptidase FtsI homolog
Intron 1 GTACGAAAAG ... TTCAATTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 57.14 | 3 | 3 | 4 |
| A2 | 30.95 | 9 | 0 | 4 |
| A3 | 44.91 | 13.5 | 0 | 11 |
| A4 | 57.14 | 6 | 6 | 8 |
| A5 | -1 | 0 | 2 | 0 |
| A6 | 21.21 | 6 | 0 | 1 |
| A7 | 27.88 | 10.5 | 1 | 4 |
| A8 | 0 | 2 | 0 | 0 |
| A9 | 26.5 | 20 | 0 | 7 |
| A10 | 30 | 9.5 | 0 | 4 |
>TRINITY_DN106543_c2_g2_i5 from sample A4 / Example spliced isoformGCTGTGGCAGCTGCTTCAGAAAAGATTCATTTAAATGTCATGAAGATATATTCGGCCGCAGAGAAATATTTACAAGGAATTGTTACCAGCTTTGAAGTAGAGTTAAACGAAGGAGCTCAATCCAGGCTGGAAGGTTCAGTAGTTGCTATAGAACCTTTAAATGGAGCTGTTCGAATACTTGTTGGAGGGAGGGACTATTA
TGAGAGTAGTTTCAATCGTGCTACACTGGCTTTCAGACCTCCAGCATCAACTTTTAAGCCCATTGTTTATTTGGCTGCTTTAGCTGAAGGCATGACCCGAAGTCATATTCTTGTAGATGAACAATACACACTTGGTGGTTTTACTCCAGAAAACTATGACCGGAAATTCAGAGGACGTGTAACCCTTGAAGAAGCCCTGG
TAAAGTCTCTAAATGTCCCAACTGTAAAGTTATGCGCTGAAATTGGAGTTGATAAGGTTTGTGACATGGCTAGAGCTTTGGGTATCAAGACTCCACTTCCGTATGAACTATCGTTGTCACTTGGAGGTTGTGAGGTTACTCCTTTGCAACTGGCAACTATTTATTCAACAATAGCTGCAGGGGGTTATTATCACAAACCT
TATATTATCAGCCGCATAGAAACTGGTGATGGTCGTGTCTTGGAGGAGGTGGAGTCAAATGATGGAAATGAAAATACTGTTGTCGATGAACATGCCATTTCGGAAATACGGCAGTTGTTACAGGCTGTTGTTGAACGAGGGACAGGTCGTGCAGCAAGACTAGGCAGGCCCTGTGCAGGAAAAACAGGAACATCTGATGA
GTATAGAGACGTATGGTTTGCTGGATTCACACCTGAGTTCTCTTGTGTGGTA
>TRINITY_DN106543_c2_g2_i3 from sample A4 / Example unspliced isoform:GCTAGAAATTGAGTAGCAGGAATGGATGTATCAGGAAGAAAGGTGCAAGTGCAAGAAAAGATGTTTGAAAAGGTTGGAGAAGGCATTGTCCGACATCTATTACTAACTAGTCGGTGCCTAGGCTGTCAGAAATCATCATACATGAGAGAAATATTTACAAGGAATTGTTACCAGCTTTGAAGTAGAGTTAAACGAAGGAG
CTCAATCCAGgtacgaaaagatttattgggttggtttatataatggcagttacatattaactatgcaaggatcataaactaagaactgagttgatgttgcactggatgtttctgaaagtaaactttagtgttcatttatgtttgccttggtttatgctagatgttatgcagtttattactttcttttagttatattcaat
tcagGCTGGAAGGTTCAGTAGTTGCTATAGAACCTTTAAATGGAGCTGTTCGAATACTTGTTGGAGGGAGGGACTATTATGAGAGTAGTTTCAATCGTGCTACACTGGCTTTCAGACCTCCAGCATCAACTTTTAAGCCCATTGTTTATTTGGCTGCTTTAGCTGAAGGCATGACCCGAAGTCATATTCTTGTAGATGAA
CAATACACACTTGGTGGTTTTACTCCAGAAAACTATGACCGGAAATTCAGAGGACGTGTAACCCTTGAAGAAGCCCTGGTAAAGTCTCTAAATGTCCCAACTGTAAAGTTATGCGCTGAAATTGGAGTTGATAAGGTTTGTGACATGGCTAGAGCTTTGGGTATCAAGACTCCACTTCCGTATGAACTATCGTTGTCACT
TGGAGGTTGTGAGGTTACTCCTTTGCAACTGGCAACTATTTATTCAACAATAGCTGCAGGGGGTTATTATCACAAACCTTATATTATCAGCCGCATAGAAACTGGTGATGGTCGTGTCTTGGAGGAGGTGGAGTCAAATGATGGAAATGAAAATACTGTTGTCGATGAACATGCCATTTCGGAAATACGGCAGTTGTTAC
AGGCTGTTGTTGAACGAGGGACAGGTCGTGCAGCAAGACTAGGCAGGCCCTGTGCAGGAAAAACAGGAACATCTGATGAGTATAGAGACGTATGGTTTGCTGGATTCACACCTGAGTTCTCTTGTGTGGTA
Intron 2 GTGAGTTTAG ... TGTGTTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 34.38 | 21 | 7 | 15 |
| A2 | 28.57 | 20 | 6 | 10 |
| A3 | 30.43 | 16 | 8 | 6 |
| A4 | 23.08 | 15 | 7 | 2 |
| A5 | 55.56 | 2 | 2 | 3 |
| A6 | 41.94 | 9 | 3 | 10 |
| A7 | 4.35 | 11 | 0 | 1 |
| A8 | 33.33 | 3 | 2 | 1 |
| A9 | 12.5 | 14 | 2 | 2 |
| A10 | 5.88 | 16 | 0 | 2 |
>TRINITY_DN115268_c4_g5_i1 from sample A1 / Example spliced isoformGTTTATACTTTAACAAGTAAGTCGTGGATCCATGCTTGTTTTCCGTGGAAGGTTTCTTTAGGAAATTAGTCATCAACACTTGGGTTTATTCAAATTTGATCAAACTTACTTTGAAATTGCTGTTTTTGTTTTGGATCAGCTAACTCTCCTTTTGTGATTTGCTGGTGCATTAATAGAGTGCTTGTATTGTATTTCTAGTT
CATAGTTTCTCTCAAACAAAATTTATGCTTATGCGATTTGATTTCTTTTTTTCTTTATTTTGATTTGCAGAGAGAAATATTTACAAGGAATTGTTACCAGCTTTGAAGTAGAGTTAAACGAAGGAGCTCAATCCAGGTACGAAAAGATTTATTGGGTTGGTTTATATAATGGCAGTTACATATTAACTATGCAAGGATCA
TAAACTAAGAACTGAGTTGATGTTGCACTGGATGTTTCTGAAAGTAAACTTTAGTGTTCATTTATGTTTGCCTTGGTTTATGCTAGATGTTATGCAGTTTATTACTTTCTTTTAGTTATATTCAATTCAGGCTGGAAGGTTCAGTAGTTGCTATAGAACCTTTAAATGGAGCTGTTCGAATACTTGTTGGAGGGAGGGAC
TATTATGAGAGTAGTTTCAATCGTGCTACACTGGCTTTCAGACCTCCAGCATCAACTTTTAAGCCCATTGTTTATTTGGCTGCTTTAGCTGAAGGCATGACCCGAAGTCATATTCTTGTAGATGAACAATACACACTTGGTGGTTTTACTCCAGAAAACTATGACCGGAAATTCAGAGGACGTGTAACCCTTGAAGAAGC
CCTGGTAAAGTCTCTAAATGTCCCAACTGTAAAGTTATGCGCTGAAATTGGAGTTGATAAGGTTTGTGACATGGCTAGAG
>TRINITY_DN115268_c4_g5_i4 from sample A1 / Example unspliced isoform:GTTTATACTTTAACAAGTAAGTCGTGGATCCATGCTTGTTTTCCGTGGAAGGTTTCTTTAGGAAATTAGTCATCAACACTTGGGTTTATTCAAATTTGATCAAACTTACTTTGAAATTGCTGTTTTTGTTTTGGATCAGCTAACTCTCCTTTTGTGATTTGCTGGTGCATTAATAGAGTGCTTGTATTGTATTTCTAGTT
CATAGTTTCTCTCAAACAAAATTTATGCTTATGCGATTTGATTTCTTTTTTTCTTTATTTTGATTTGCAGAGAGAAATATTTACAAGGAATTGTTACCAGCTTTGAAGTAGAGTTAAACGAAGGAGCTCAATCCAGGTACGAAAAGATTTATTGGGTTGGTTTATATAATGGCAGTTACATATTAACTATGCAAGGATCA
TAAACTAAGAACTGAGTTGATGTTGCACTGGATGTTTCTGAAAGTAAACTTTAGTGTTCATTTATGTTTGCCTTGGTTTATGCTAGATGTTATGCAGTTTATTACTTTCTTTTAGTTATATTCAATTCAGGCTGGAAGGTTCAGTAGTTGCTATAGAACCTTTAAATGGAGCTGTTCGAATACTTGTTGGAGGGAGGGAC
TATTATGAGAGTAGTTTCAATCGTGCTACACTGgtgagtttagttttcttgtgggttcataagtttttctctggtttattttgtctgcaatttagaacgatcatttgtgttgcagGCTTTCAGACCTCCAGCATCAACTTTTAAGCCCATTGTTTATTTGGCTGCTTTAGCTGAAGGCATGACCCGAAGTCATATTCTTG
TAGATGAACAATACACACTTGGTGGTTTTACTCCAGAAAACTATGACCGGAAATTCAGAGGACGTGTAACCCTTGAAGAAGCCCTGGTAAAGTCTCTAAATGTCCCAACTGTAAAGTTATGCGCTGAAATTGGAGTTGATAAGGTTTGTGACATGGCTAGAG