NA ----> NA

Intron 1 ATTACTGAGC ... AGTGTCTTAC

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	67.71	31	53	77
A2	72.13	17	40	48
A3	64.62	23	30	54
A4	69.77	13	24	36
A5	79.49	4	14	17
A6	75	1	3	3
A7	-1	0	0	0
A8	100	0	4	4
A9	-1	0	0	0
A10	-1	0	0	0

>TRINITY_DN118314_c7_g1_i2 from sample A2 / Example spliced isoform

CTCATAGCCACTGGTCATCATTTCATTATTGTCATCTATATATTGCTGCATACATCACTGAGCATATATATATAATCCTGTGTTCGTTACTGAGCATATCATATCATTACTGTGTCATACATATCATTGAGCATATCACTGTGCAAACTGATCATTACTGAGCATACATATCTTCACTGTTTATATCACTATGTATATCA
TCGTTGTGTAAACTCAGCATACATATCGTTACTGTGTAAACTGAGCATACATGTCATCACTCTGTGTATCATCACTATGTAAGCTGAGCATACTTTTCATCACTGAGCATATACACTACTGAACATCATCACATCAGTGAGTAATCACTGAGCATAGGTGTAGATATCATATTACATCATATTACTAGCACATCATATCA
CTGTCTAATGTCTGAGTGTAAGTATCATCATCATCATAAAATATGCATAATTGTCACTTCAGTGTGCACCGTGTATGCATCATCAACATCAAGTATACATCATAATGCATAGGAGAGCATCATCACACTATGGTTTGCATGTACATCATAT

>TRINITY_DN118314_c7_g1_i1 from sample A2 / Example unspliced isoform:

CTCATAGCCACTGGTCATCATTTCATTATTGTCATCTATATATTGCTGCATACATCACTGAGCATATATATATAATCCTGTGTTCattactgagcatattacatatcaccgagtgtcttacGTTACTGAGCATATCATATCATTACTGTGTCATACATATCATTGAGCATATCACTGTGCAAACTGATCATTACTGAGCA
TACATATCTTCACTGTTTATATCACTATGTATATCATCGTTGTGTAAACTCAGCATACATATCGTTACTGTGTAAACTGAGCATACATGTCATCACTCTGTGTATCATCACTATGTAAGCTGAGCATACTTTTCATCACTGAGCATATACACTACTGAACATCATCACATCAGTGAGTAATCACTGAGCATAGGTGTAGA
TATCATATTACATCATATTACTAGCACATCATATCACTGTCTAATGTCTGAGTGTAAGTATCATCATCATCATAAAATATGCATAATTGTCACTTCAGTGTGCACCGTGTATGCATCATCAACATCAAGTATACATCATAATGCATAGGAGAGCATCATCACACTATGGTTTGCATGTACATCATAT