sp|F4JP48|MSH4_ARATH ----> DNA mismatch repair protein MSH4
Intron 1 GTATGCATAC ... GAACTGTAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 35.38 | 21 | 16 | 7 |
| A2 | 47.83 | 6 | 2 | 9 |
| A3 | 46.67 | 4 | 6 | 1 |
| A4 | 26.32 | 7 | 1 | 4 |
| A5 | 33.33 | 1 | 1 | 0 |
| A6 | 26.32 | 7 | 3 | 2 |
| A7 | 41.18 | 5 | 1 | 6 |
| A8 | 38.78 | 15 | 11 | 8 |
| A9 | 25 | 6 | 2 | 2 |
| A10 | 28.57 | 5 | 2 | 2 |
>TRINITY_DN109259_c4_g2_i2 from sample A2 / Example spliced isoformTTAGATAGGGTTCTTTGCCACTTTTGCTTCAAACCAAATAGAGTTTCAGTTGAAAGTTCAACCTTTTCAAGAGCAAAGGGGAGCCAAATTATTGTGGCAAGCATTATTCTTCTAAAAGAAGCTCTAGAGGCATTGCCTTCACTCTCAGAGGTTTTGAGGAATGCAAAAAGCTTCCTTCTTTCCAAGATCTACAGTTCAAT
TTGTGAAAACAAAATTTATGGCCTCATAAAAACAAGGATTGAGGAGGTTATTGATGAAGATATCCTGCATGCAAGGGCACCCTTTGTTGTTCGCACCCAACACTGCTTTGCTGTCAAGCCTAAATTAGATGGATTTCTTGATGTTGCAAGAAAATCATTCTGTGATACAACTGAAGCCATACATGTTCTCGCAAAGAAAT
ATCGTGAAGATATGGAACTGCCAAACTTGAAGATGCCCTTTAACAATAGGCAAGGTTTCTATATCACCATACCACAGAAGGATTTACCTGAGGGAGGTTTGCCTGAGATATTTATTCAGGTCCTTAAACAAGGGAAAAACATACATTGTTCCACTCAAGAATTGATTTCTCTAAATTGTAGGAACAAGTCAGCTGCTGAA
GAATGCTACCTAAGAACAAAACATTGTCTGGAAGGACTAATTGATTCTGTACAACAGGATATCTCTCTCCTTACTCTTCTTTCAGAATCTTTGTGCCTCTTAGACATGATTGTAAATTCTTTTGCGCATACAATATTAAGTAAACCTGTTGACAGTTACACCCGACCTGAATTCACTGAAAATGGTCCCATAGCAATAGA
GGCGGGGAGGCACCCTATTCTTGAATGCATTCGTCCTGAAGAATTTGTTGCAAACAATACCTTCCTGTCAGAAGCATCCAATATGGTTATTGTCATGGGACCAAATATGAGTGGGAAGAGTACTTACCTTAGACAAGTATGTCTTATGACAGTCTTTGCTCAAATTGGTTGCTATGTTCCTGCCCATTTCGCTTCCTTTA
GAGTTGTGGACTGTTTGTTTACACGAATTGGAACTGGAGACAGTTTGGAGTCCAACTCTAGCACTTTTATGACGGAGATGAAGGAAACTGCATTTATTATGCAAAATATCTCACCTCGGAGCCTAATCGTAATTGATGAACTCGGACGATCTACTTCTTCATTAGATGGCCTTGCAATGGCATGGAGTTGTTGCGAATAT
TTGTTGTCACTTCAAGTGTATACAATATTCGCAACACATATGGAGCGCCTTTCCGAACTAGCAAGTATTTATCCAAATGTCAAAGTTTGTCATTTTCAAGTCATTGTTAGAGATAACAGAATGGAT
>TRINITY_DN109259_c4_g2_i1 from sample A2 / Example unspliced isoform:TTAGATAGGGTTCTTTGCCACTTTTGCTTCAAACCAAATAGAGTTTCAGTTGAAAGTTCAACCTTTTCAAGAGCAAAGGGGAGCCAAATTATTGTGGCAAGCATTATTCTTCTAAAAGAAGCTCTAGAGGCATTGCCTTCACTCTCAGAGGTTTTGAGGAATGCAAAAAGCTTCCTTCTTTCCAAGATCTACAGTTCAAT
TTGTGAAAACAAAATTTATGGCCTCATAAAAACAAGGATTGAGGAGGTTATTGATGAAGATATCCTGCATGCAAGGGCACCCTTTGTTGTTCGCACCCAACACTGCTTTGCTGTCAAGCCTAAATTAGATGGATTTCTTGATGTTGCAAGAAAATCATTCTGTGATACAACTGAAGCCATACATGTTCTCGCAAAGAAAT
ATCGTGAAGATATGGAACTGCCAAACTTGAAGATGCCCTTTAACAATAGGCAAGGTTTCTATATCACCATACCACAGAAGGATTTACCTGAGGGAGGTTTGCCTGAGATATTTATTCAGGTCCTTAAACAAGGGAAAAACATACATTGTTCCACTCAAGAATTGATTTCTCTAAATTGTAGGAACAAGTCAGCTGCTGAA
GAATGCTACCTAAGAACAAAACATTGTCTGGAAGGACTAATTGATTCTGTACAACAGGATATCTCTCTCCTTACTCTTCTTTCAGAATCTTTGTGCCTCTTAGACATGATTGTAAATTCTTTTGCGCATACAATATTAAGTAAACCTGTTGACAGTTACACCCGACCTGAATTCACTGgtatgcatacatatgaatctct
acataatcatgttttgaggcaagttattaactggataaaattattactattgtgttttgatactgttggaactgtaagAAAATGGTCCCATAGCAATAGAGGCGGGGAGGCACCCTATTCTTGAATGCATTCGTCCTGAAGAATTTGTTGCAAACAATACCTTCCTGTCAGAAGCATCCAATATGGTTATTGTCATGGGA
CCAAATATGAGTGGGAAGAGTACTTACCTTAGACAAGTATGTCTTATGACAGTCTTTGCTCAAATTGGTTGCTATGTTCCTGCCCATTTCGCTTCCTTTAGAGTTGTGGACTGTTTGTTTACACGAATTGGAACTGGAGACAGTTTGGAGTCCAACTCTAGCACTTTTATGACGGAGATGAAGGAAACTGCATTTATTAT
GCAAAATATCTCACCTCGGAGCCTAATCGTAATTGATGAACTCGGACGATCTACTTCTTCATTAGATGGCCTTGCAATGGCATGGAGTTGTTGCGAATATTTGTTGTCACTTCAAGTGTATACAATATTCGCAACACATATGGAGCGCCTTTCCGAACTAGCAAGTATTTATCCAAATGTCAAAGTTTGTCATTTTCAAG
TCATTGTTAGAGATAACAGAATGGAT