sp|Q9XIF2|MTR4_ARATH ----> DExH-box ATP-dependent RNA helicase DExH9


Intron 1 GTATCGGCCC ... GGTTGCAAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A173.86234783
A271.75255275
A371.74263696
A474.5194170
A568.63162446
A668.4261016
A782.46102668
A8763136
A977.27101751
A1081.51112671



>TRINITY_DN119073_c0_g1_i2 from sample A2 / Example spliced isoform
ATAAAAATAGACCAACCCCACAAAAATAGGAATAAAAAGGCGGTTTAATGTTTAGGGCAAAAATTGGCACACAAGCGTATGTAACATGAGAGCCTTTCCAGGACCGTAAATGCCCCGGAATAATATTATTTTTCTTCGCCAGAACTGGTAAATTTGGCCGTGAGAGGCATGACGGCTGTGAAGAGGAAAGCCGAGGACGA
AGTCCTTCACAGTCCTGGTAACGGTGGGGGTGCGGCCCCTCCCTTCCATAAACTCCCGAGGGCTGAAGAAGATGAACAAAAGCAGCTTGACAACGACAACAACAATACATATGGATCGCAGGAAGGGACGGTTACATGCCTCCACGACGTGTCCTACCCGGAGGAAGGGGGAGGGTACGCCCCCCCTAAATCCAAGAGAG
ACGAAGGGGCGACCGCTACTAAGAAGGCTGCGAAGGAGTATCCCTTCAAGCTCGACCCTTTTCAGGATGAAGCCATCCGATGTCTGGAGCGCGGCGAGTCTGTTTTGGTACACCAGCAGCCTTGTCACATTATTTATACGGATTATCGACCCACACCCTTGCAGCACTATCTCTTCCCTTCTGGGGGAGATGGCTTGTTC
TTGGTGGTAGATGAGAAAGGCACTTTTCGGGAAGACAGTTTTCAGAAAGCAGTGAATGCTGTTGGAGCTGCTTCTGATAATGGAAACAAGAGAAATGGAAAGTGGCAAAAGGGACTACAGGCGGGTAAATCTGGTGAAGAAAGTGACATTTTCAAGATTGCTAAAATGATAATGCAACGGCAATATGACCCGGTTATTGT
TTTCAGTTTCAGCAAGAGAGATTGTGAAATTCTGGCTATGCAGATGGCAAAGTTGGATTTGAATGTGGAAGATGAGAAAAAACTTGTTGATACCATCTTCTGGAGTGCCATGGATTCACTTTCTGATGATGACAAGAAGCTACCACAGGTTTCTCATATTTTACCCTTACTTCAACGAGGCATAGGTGTGCATCATTCTG
GTCTGCTTCCTATTCTTAAGGAAGTAATAGAGATACTCTTTCAAGAAGGATTAATCAAGTGTTTATTTGCAACAGAAACATTCAGCATAGGTCTGAACATGCCTGCAAAGACGGTTGTGTTTACAAATGTCCGCAAATTTGATGGTGACAAGTTCCGCTGGATATCTAGTGGAGAGTATATTCAGATGAGTGGACGTGCT
GGAAGGCGAGGCCTTGATGCACGTGGCATTTGCATTTTGATGGTTGATGAAAAGATGGAGCCATCCACTGCAAAATTAATGGTCAAAGGCAGTGCTGATCCTTTGAATAGTGCCTTCCATCTGAGCTACAATATGCTATTGAATCAGATGCGTTGCGAGGATGGTGATCCAGAGACTCTGCTGAGACAATCTTTCTACCA
GTTCCAGTCTGATCGTGCACTTCCCAGTCTTCAG


>TRINITY_DN119073_c0_g1_i1 from sample A2 / Example unspliced isoform:
ATAAAAATAGACCAACCCCACAAAAATAGGAATAAAAAGGCGGTTTAATGTTTAGGGCAAAAATTGGCACACAAGCGTATGTAACATGAGAGCCTTTCCAGGACCGTAAATGCCCCGGAATAATATTATTTTTCTTCGCCAGAACTGGTAAATTTGGCCGTGAGAGGCATGACGGCTGTGAAGAGGAAAGCCGAGGACGA
AGTCCTTCACAGTCCTGGTAACGGTGGGGGTGCGGCCCCTCCCTTCCATAAACTCCCGAGGGCTGAAGAAGATGAACAAAAGCAGCTTGACAACGACAACAACAATACATATGGATCGCAGGAAGGGACGGTTACATGCCTCCACGACGTGTCCTACCCGGAGGAAGGGGGAGGGTACGCCCCCCCTAAATCCAAGAGAG
ACGAAGGGGCGACCGCTACTAAGAAGGCTGCGAAGGAGTATCCCTTCAAGCTCGACCCTTTTCAGGATGAAGCCATCCGATGTCTGGAGCGCGGCGAGTCTGTTTTGgtatcggcccatacatcagctggaaaaactgttgttgctttatatgccattgccatgtcattacgagataagcaacgggttatttacacttct
ccaatcaaggcacttagcaatcaaaaatttagagaatttagcgaggagttctcagatgttggtctgatgactggtgatgtcacaattgcgccaaatgcatcttgcttggtgatgacaactgaaattttacgaagcatgcaatacaagggttctgaggttatgcgagaagtggcttggataatctttgatgaagtacatta
catgcgtgatagagaaaggggtgtggtctgggaagagagcattgtaatggctccaaaaaattctcgattcgtatttctctcagcaactgtgccaaatgcaagagagtttgctgattgggttgcaaagGTACACCAGCAGCCTTGTCACATTATTTATACGGATTATCGACCCACACCCTTGCAGCACTATCTCTTCCCTT
CTGGGGGAGATGGCTTGTTCTTGGTGGTAGATGAGAAAGGCACTTTTCGGGAAGACAGTTTTCAGAAAGCAGTGAATGCTGTTGGAGCTGCTTCTGATAATGGAAACAAGAGAAATGGAAAGTGGCAAAAGGGACTACAGGCGGGTAAATCTGGTGAAGAAAGTGACATTTTCAAGATTGCTAAAATGATAATGCAACGG
CAATATGACCCGGTTATTGTTTTCAGTTTCAGCAAGAGAGATTGTGAAATTCTGGCTATGCAGATGGCAAAGTTGGATTTGAATGTGGAAGATGAGAAAAAACTTGTTGATACCATCTTCTGGAGTGCCATGGATTCACTTTCTGATGATGACAAGAAGCTACCACAGGTTTCTCATATTTTACCCTTACTTCAACGAGG
CATAGGTGTGCATCATTCTGGTCTGCTTCCTATTCTTAAGGAAGTAATAGAGATACTCTTTCAAGAAGGATTAATCAAGTGTTTATTTGCAACAGAAACATTCAGCATAGGTCTGAACATGCCTGCAAAGACGGTTGTGTTTACAAATGTCCGCAAATTTGATGGTGACAAGTTCCGCTGGATATCTAGTGGAGAGTATA
TTCAGATGAGTGGACGTGCTGGAAGGCGAGGCCTTGATGCACGTGGCATTTGCATTTTGATGGTTGATGAAAAGATGGAGCCATCCACTGCAAAATTAATGGTCAAAGGCAGTGCTGATCCTTTGAATAGTGCCTTCCATCTGAGCTACAATATGCTATTGAATCAGATGCGTTGCGAGGATGGTGATCCAGAGACTCTG
CTGAGACAATCTTTCTACCAGTTCCAGTCTGATCGTGCACTTCCCAGTCTTCAGGTTCATTCCATACATTGCAACTAAATACTGAATATTATTTGTGCAGACTGGATTATCTTGATGCAATTTCATTACAAAGCTTACTCCCAATCTTTATCATTTTTTACCTGTCCTATGAGAAGCTCTGATTATAGTGGAGTGCTGCT
GGCAGTATGCAAGGGCTCGTCTTTGAATCTCATTGTGTTATAAAAGTTTAAATCATGTGTTTGTACGAGCTAAATTGGAGTGC



Intron 2 GTTTCTCATA ... ATTAATCAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A171.79227240
A274.19205659
A365.41327744
A460.54295633
A576.8182825
A669.234108
A764.6204429
A851.61152012
A957.58284828
A1057.97295525



>TRINITY_DN107468_c0_g1_i2 from sample A4 / Example spliced isoform
GTATGTAACATGAGAGCCTTTCCAGGACCGTAAATGCCCCGGAATAATATTATTTTTCTTCGCCAGAACTGGTAAATTTGGCCGTGAGAGGCATGACGGCTGTGAAGAGGAAAGCCGAGGACGAAGTCCTTCACAGTCCTGGTAACGGTGGGGGTGCGGCCCCTCCCTTCCATAAACTCCCGAGGGCTGAAGAAGATGAA
CAAAAGCAGCTTGACAACGACAACAACAATACATATGGATCGCAGGAAGGGACGGTTACATGCCTCCACGACGTGTCCTACCCGGAGGAAGGGGGAGGGTACGCCCCCCCTAAATCCAAGAGAGACGAAGGGGCGACCGCTACTAAGAAGGCTGCGAAGGAGTATCCCTTCAAGCTCGACCCTTTTCAGGATGAAGCCAT
CCGATGTCTGGAGCGCGGCGAGTCTGTTTTGGTATCGGCCCATACATCAGCTGGAAAAACTGTTGTTGCTTTATATGCCATTGCCATGTCATTACGAGATAAGCAACGGGTTATTTACACTTCTCCAATCAAGGCACTTAGCAATCAAAAATTTAGAGAATTTAGCGAGGAGTTCTCAGATGTTGGTCTGATGACTGGTG
ATGTCACAATTGCGCCAAATGCATCTTGCTTGGTGATGACAACTGAAATTTTACGAAGCATGCAATACAAGGGTTCTGAGGTTATGCGAGAAGTGGCTTGGATAATCTTTGATGAAGTACATTACATGCGTGATAGAGAAAGGGGTGTGGTCTGGGAAGAGAGCATTGTAATGGCTCCAAAAAATTCTCGATTCGTATTT
CTCTCAGCAACTGTGCCAAATGCAAGAGAGTTTGCTGATTGGGTTGCAAAGGTACACCAGCAGCCTTGTCACATTATTTATACGGATTATCGGCCCACACCCTTGCAGCACTATCTCTTCCCTTCTGGGGGAGATGGCTTGTTCTTGGTGGTAGATGAGAAAGGCACTTTTCGGGAAGACAGTTTTCAGAAAGCAGTGAA
TGCTGTTGGAGCTGCTTCTGATAATGGAAACAAGAGAAATGGAAAGTGGCAAAAGGGACTACAGGCGGGTAAATCTGGTGAAGAAAGTGACATTTTCAAGATTGCTAAAATGATAATGCAACGGCAATATGACCCGGTTATTGTTTTCAGTTTCAGCAAGAGAGATTGTGAAATTCTGGCTATGCAGATGGCAAAGTTGG
ATTTGAATGTGGAAGATGAGAAAAAACTTGTTGATACCATCTTCTGGAGTGCCATGGATTCACTTTCTGATGATGACAAGAAGCTACCACAGTGTTTATTTGCAACAGAAACATTCAGCATAGGTCTGAACATGCCTGCAAAGACGGTTGTGTTTACAAATGTCCGCAAATTTGATGGTGACAAGTTCCGCTGGATATCT
AGTGGAGAGTATATTCAGATGAGTGGACGTGCTGGAAGGCGAGGCCTTGATGCACGTGGCATTTGCATTTTGATGGTTGATGAAAAGATGGAGCCATCCACTGCAAAATCAATGGTCAAAGGCAGTGCTGATCCTTTGAATAGTGCCTTCCATCTGAGCTACAATATGCTATTGAATCAGATGCGTTGCGAGGATGGTGA
TCCAGAGACTCTGCTGAGACAATCTTTCTACCAGTTCCAGTCTGATCGGGCACTTCCCAGTCTTCAGAAACGTGTGAAGGATCTGGAGGAACAGAGAGACTCGATTGTGATTGAGGAAGAAGATAAATTAAAAGACTACTACTCTCTGCTGGAACAGTTCCGTAGCTTCAAGGGTGACATGCGTAGTATTGTATTTTCAC
CAAGACATTGTTTGCCATTTCTTCAGCCTGGAAGGCTTATCCGCATTCTAAGCACTAGTGGAGAGAAAGACAAACTGTCTTTCTCACAGGATGAGCAACTAACTTGGGGTGTAATCGTTAACTTTGAGAGAGTGAAAAACACATCAAAAGATGATACAAATGTAAGGCCAGAAGATGCACAGTATACTATCGATATTCTA
ACAAAATGTCGTGCAAATAAAGATTATAGCCGGGGAAAGATTGTGCAGACTGTTCCATGGACAGAACCTGGCGAGCCACTTGTTGTTGCTGTACCACTTTCTCAGATTGACAGCTTGAGTGCTATCCGCATTTATATACCCAAGGACTTACTATCTGTTGAAGCTCGTGAAAATACACTGAAAAAAGTCCAGGAGGTGTT
GAACCGCTTTCCAGATGGTGTGCAACTTTTAGATCCAGAAGATGATATGCAGGTACAAAGCAGCTCATATAAGAAGGCTGTTCGTCGTATAGAAACTCTAGAAGGCTTACTTGCTAAACATGTTGTTTCCAAGTCTCCCATTCTCCAGAAGCGCCTACAAGTACTAAGAAAAAAGGAAGAGTTAACAGCAATGGTTCGTG
CTGCCCGGAGGGAGGTCCGTGCTTCGACATCATTGGCCTTTAAAGATGAGTTGAAGGCTCGAAGGCGTGTGCTTCGGAGATTAGGGTATGCAACAAGTGATGACGTTGTGGAACTCAAAGGGAAGGTTGCCTGCGAAATAAGCAGTGCTGATGAATTAGCTCTGACAGAATTAATGTTCAGTGGTGTGTTCAAGGATGCC
ACAGTTGAACAATTGGTTGCTCTTTTGTCATGTTTTGTCTGGCAAGAGAAATTGAAAGACAGGCCAAAACTAAGGGAGGATCTTGAAACTCTCTTGTCTCAGTTACATGACATTGCGCGAAGGATAGGCAAAGTACAGCTTGAATGCAAGGTGCAAATTGATGTGGAAGCCTATGTGAACTCTTTCCGTCCAGACGTTAT
GGAGGCAGTTTATGCTTGGGCAAAAGGGGCAAAGTTCTATGAAATAATGCAGATTACAGAGGTCTTCGAGGGTAGTTTAATTCGTGCCATTCGAAGACTGGAAGAAGTTCTTCAACAGCTAGTACTAGCATCAAGATCTATAGGAGAGGTTCAGCTAGAGTTAAAATTTCAGGAGGCTATTACAAGAATTAAAAGAGACA
TTGTTTTTGCTGCATCATTGTACTTGTAGACGAATATTATTCATAAAATTCGGAAAGCGGTTTAGTAATATAGTTCTTTTTCTAATTGTTATGGGGACCGATCATGTTTAAATAATAAGACTGTCTATGGTTTTGACGAAGCTAAAGATTTGTTTAGCGCCTTACAATAGAAAACAAAGGCATTTCCATGGTTATGGTAT
TAAATAACCTTATTTGTGCAGTTATGGCTAATGCAAATATTAACGTGTTGTGTATGTATCGACAGTTATGACAGTCGGCTACACTTAATCTAGGTGCACTTAATTTACGGGTACAATATATTATCCTGGCAGCTGGGAACTAAGCCAGACTATAGATT


>TRINITY_DN107468_c0_g1_i1 from sample A4 / Example unspliced isoform:
GTATGTAACATGAGAGCCTTTCCAGGACCGTAAATGCCCCGGAATAATATTATTTTTCTTCGCCAGAACTGGTAAATTTGGCCGTGAGAGGCATGACGGCTGTGAAGAGGAAAGCCGAGGACGAAGTCCTTCACAGTCCTGGTAACGGTGGGGGTGCGGCCCCTCCCTTCCATAAACTCCCGAGGGCTGAAGAAGATGAA
CAAAAGCAGCTTGACAACGACAACAACAATACATATGGATCGCAGGAAGGGACGGTTACATGCCTCCACGACGTGTCCTACCCGGAGGAAGGGGGAGGGTACGCCCCCCCTAAATCCAAGAGAGACGAAGGGGCGACCGCTACTAAGAAGGCTGCGAAGGAGTATCCCTTCAAGCTCGACCCTTTTCAGGATGAAGCCAT
CCGATGTCTGGAGCGCGGCGAGTCTGTTTTGGTATCGGCCCATACATCAGCTGGAAAAACTGTTGTTGCTTTATATGCCATTGCCATGTCATTACGAGATAAGCAACGGGTTATTTACACTTCTCCAATCAAGGCACTTAGCAATCAAAAATTTAGAGAATTTAGCGAGGAGTTCTCAGATGTTGGTCTGATGACTGGTG
ATGTCACAATTGCGCCAAATGCATCTTGCTTGGTGATGACAACTGAAATTTTACGAAGCATGCAATACAAGGGTTCTGAGGTTATGCGAGAAGTGGCTTGGATAATCTTTGATGAAGTACATTACATGCGTGATAGAGAAAGGGGTGTGGTCTGGGAAGAGAGCATTGTAATGGCTCCAAAAAATTCTCGATTCGTATTT
CTCTCAGCAACTGTGCCAAATGCAAGAGAGTTTGCTGATTGGGTTGCAAAGGTACACCAGCAGCCTTGTCACATTATTTATACGGATTATCGGCCCACACCCTTGCAGCACTATCTCTTCCCTTCTGGGGGAGATGGCTTGTTCTTGGTGGTAGATGAGAAAGGCACTTTTCGGGAAGACAGTTTTCAGAAAGCAGTGAA
TGCTGTTGGAGCTGCTTCTGATAATGGAAACAAGAGAAATGGAAAGTGGCAAAAGGGACTACAGGCGGGTAAATCTGGTGAAGAAAGTGACATTTTCAAGATTGCTAAAATGATAATGCAACGGCAATATGACCCGGTTATTGTTTTCAGTTTCAGCAAGAGAGATTGTGAAATTCTGGCTATGCAGATGGCAAAGTTGG
ATTTGAATGTGGAAGATGAGAAAAAACTTGTTGATACCATCTTCTGGAGTGCCATGGATTCACTTTCTGATGATGACAAGAAGCTACCACAGgtttctcatattttacccttacttcaacgaggcataggtgtgcatcattctggtctgcttcctattcttaaggaagtaatagagatactctttcaagaaggattaatc
aagTGTTTATTTGCAACAGAAACATTCAGCATAGGTCTGAACATGCCTGCAAAGACGGTTGTGTTTACAAATGTCCGCAAATTTGATGGTGACAAGTTCCGCTGGATATCTAGTGGAGAGTATATTCAGATGAGTGGACGTGCTGGAAGGCGAGGCCTTGATGCACGTGGCATTTGCATTTTGATGGTTGATGAAAAGAT
GGAGCCATCCACTGCAAAATCAATGGTCAAAGGCAGTGCTGATCCTTTGAATAGTGCCTTCCATCTGAGCTACAATATGCTATTGAATCAGATGCGTTGCGAGGATGGTGATCCAGAGACTCTGCTGAGACAATCTTTCTACCAGTTCCAGTCTGATCGGGCACTTCCCAGTCTTCAGAAACGTGTGAAGGATCTGGAGG
AACAGAGAGACTCGATTGTGATTGAGGAAGAAGATAAATTAAAAGACTACTACTCTCTGCTGGAACAGTTCCGTAGCTTCAAGGGTGACATGCGTAGTATTGTATTTTCACCAAGACATTGTTTGCCATTTCTTCAGCCTGGAAGGCTTATCCGCATTCTAAGCACTAGTGGAGAGAAAGACAAACTGTCTTTCTCACAG
GATGAGCAACTAACTTGGGGTGTAATCGTTAACTTTGAGAGAGTGAAAAACACATCAAAAGATGATACAAATGTAAGGCCAGAAGATGCACAGTATACTATCGATATTCTAACAAAATGTCGTGCAAATAAAGATTATAGCCGGGGAAAGATTGTGCAGACTGTTCCATGGACAGAACCTGGCGAGCCACTTGTTGTTGC
TGTACCACTTTCTCAGATTGACAGCTTGAGTGCTATCCGCATTTATATACCCAAGGACTTACTATCTGTTGAAGCTCGTGAAAATACACTGAAAAAAGTCCAGGAGGTGTTGAACCGCTTTCCAGATGGTGTGCAACTTTTAGATCCAGAAGATGATATGCAGGTACAAAGCAGCTCATATAAGAAGGCTGTTCGTCGTA
TAGAAACTCTAGAAGGCTTACTTGCTAAACATGTTGTTTCCAAGTCTCCCATTCTCCAGAAGCGCCTACAAGTACTAAGAAAAAAGGAAGAGTTAACAGCAATGGTTCGTGCTGCCCGGAGGGAGGTCCGTGCTTCGACATCATTGGCCTTTAAAGATGAGTTGAAGGCTCGAAGGCGTGTGCTTCGGAGATTAGGGTAT
GCAACAAGTGATGACGTTGTGGAACTCAAAGGGAAGGTTGCCTGCGAAATAAGCAGTGCTGATGAATTAGCTCTGACAGAATTAATGTTCAGTGGTGTGTTCAAGGATGCCACAGTTGAACAATTGGTTGCTCTTTTGTCATGTTTTGTCTGGCAAGAGAAATTGAAAGACAGGCCAAAACTAAGGGAGGATCTTGAAAC
TCTCTTGTCTCAGTTACATGACATTGCGCGAAGGATAGGCAAAGTACAGCTTGAATGCAAGGTGCAAATTGATGTGGAAGCCTATGTGAACTCTTTCCGTCCAGACGTTATGGAGGCAGTTTATGCTTGGGCAAAAGGGGCAAAGTTCTATGAAATAATGCAGATTACAGAGGTCTTCGAGGGTAGTTTAATTCGTGCCA
TTCGAAGACTGGAAGAAGTTCTTCAACAGCTAGTACTAGCATCAAGATCTATAGGAGAGGTTCAGCTAGAGTTAAAATTTCAGGAGGCTATTACAAGAATTAAAAGAGACATTGTTTTTGCTGCATCATTGTACTTGTAGACGAATATTATTCATAAAATTCGGAAAGCGGTTTAGTAATATAGTTCTTTTTCTAATTGT
TATGGGGACCGATCATGTTTAAATAATAAGACTGTCTATGGTTTTGACGAAGCTAAAGATTTGTTTAGCGCCTTACAATAGAAAACAAAGGCATTTCCATGGTTATGGTATTAAATAACCTTATTTGTGCAGTTATGGCTAATGCAAATATTAACGTGTTGTGTATGTATCGACAGTTATGACAGTCGGCTACACTTAAT
CTAGGTGCACTTAATTTACGGGTACAATATATTATCCTGGCAGCTGGGAACTAAGCCAGACTATAGATT