NA ----> NA
Intron 1 GTTAGTTATT ... GACTGTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 46.15 | 21 | 4 | 18 |
| A2 | 36 | 16 | 9 | 9 |
| A3 | 41.03 | 23 | 3 | 16 |
| A4 | 34.48 | 19 | 4 | 10 |
| A5 | 42.86 | 4 | 2 | 3 |
| A6 | 42.11 | 11 | 6 | 8 |
| A7 | 48.62 | 112 | 29 | 106 |
| A8 | 44.63 | 67 | 18 | 54 |
| A9 | 48.81 | 193 | 38 | 184 |
| A10 | 44.87 | 172 | 50 | 140 |
>TRINITY_DN48321_c0_g2_i1 from sample A7 / Example spliced isoformGGAACAACCTACGGAAATGATGAAGACAAGCACGACCTCCGGCTTGCTGAACTTGAAAATCACACATATATAAATCTTGATAATCCTTAGCTCCTTGCTTTATGGATCTTGGCCTGCAACATCCTCTTGAATAACCTCCGGTCAGTCAGATCTCAGCAGGCCTTCACCCCTTGTTTTGCTACCAGATGGAACCTAGTTCT
TTATATTCTTCGTTTCATTACTAGTGCTCATTAATTCTCGGCTGGCGGTTGTTCTCTCTTCTCATGCTCTCGGGAACGTATTCCGCGAAGGAGAGAAAAAACATCATCCGTAGCCTGCTGGCTGATTGGGGTCTGGTAGACCGAATTTTACTCGCACCTTGAAATCGGAAGCACAGCGACACAGCCTATCAATCCCAAAA
TAGAGAATGTTGAGGCGATTAAAACAATGTTTCAGGATGCGAGCACAAGGGAATGATAACTCAAACACAGATCAGCAAAGTGGGCTTACTGCACAGGCAGAGGAGACTGATAATGCAAGCAAAGATGAGAACAGTGAAGAGATTAATGGCGTAAGCAGATATATTGGGCAACGTTGGTCTTCTCCACGAGGAGAGGATCA
GATTCGTAATGCAAGGCTGAAGCCGCAAGAGATCCCTATGGAATGGGTCCCTTATGTTTCCCGTCCTCGCACTCTGGACAAACCCAATGAGAAAGATATTGATGGCTCAGTGTTACCCCGTCGCCTTAACCGTTCTACGGACAAGAAGAAGCTTCAAAGCGGGTTGTTCGGTAAAGACAATGAGACTGAAACCACATATT
ATGAAATTGGGTCTACTCAACGGCTTTCAAGTAACGAAATTAGTCATTCGGAGCAAACAATTCGTGAAGAAGAATGGCTGGA
>TRINITY_DN48321_c0_g2_i4 from sample A7 / Example unspliced isoform:GGAACAACCTACGGAAATGATGAAGACAAGCACGACCTCCGGCTTGCTGAACTTGAAAATCACACATATATAAATCTTGATAATCCTTAGCTCCTTGCTTTATGGATCTTGGCCTGCAACATCCTCTTGAATAACCTCCGGTCAGTCAGATCTCAGCAGGCCTTCACCCCTTGTTTTGCTACCAGATGGAACCTAGTTCT
TTATATTCTTCGTTTCATTACTAGTGCTCATTAATTCTCGGCTGGCGGTTGTTCTCTCTTCTCATGCTCTCGGGAACGTATTCCGCGAAGGAGAGAAAAAACATCATCCGTAGCCTGCTGGCTGATTGGGGTCTGgttagttatttaattatatctgctaatttgtgcattctttttcttattattggtgtccgcttatt
atttgtcctatctgattgggctgattaggattgttctcgtacagatacatattattttgcgttttacctttgtccagataattggggttgttcccgtacggattacagattattggcccatatccggtctaaactaagttgggttatccttggctccttgctttatggaccttggactgtgtagGTAGACCGAATTTTAC
TCGCACCTTGAAATCGGAAGCACAGCGACACAGCCTATCAATCCCAAAATAGAGAATGTTGAGGCGATTAAAACAATGTTTCAGGATGCGAGCACAAGGGAATGATAACTCAAACACAGATCAGCAAAGTGGGCTTACTGCACAGGCAGAGGAGACTGATAATGCAAGCAAAGATGAGAACAGTGAAGAGATTAATGGCG
TAAGCAGATATATTGGGCAACGTTGGTCTTCTCCACGAGGAGAGGATCAGATTCGTAATGCAAGGCTGAAGCCGCAAGAGATCCCTATGGAATGGGTCCCTTATGTTTCCCGTCCTCGCACTCTGGACAAACCCAATGAGAAAGATATTGATGGCTCAGTGTTACCCCGTCGCCTTAACCGTTCTACGGACAAGAAGAAG
CTTCAAAGCGGGTTGTTCGGTAAAGACAATGAGACTGAAACCACATATTATGAAATTGGGTCTACTCAACGGCTTTCAAGTAACGAAATTAGTCATTCGGAGCAAACAATTCGTGAAGAAGAATGGCTGGA