sp|Q9FJ98|RPD6A_ARATH ----> DNA-directed RNA polymerases II, IV and V subunit 6A

Intron 1 GTACATTTAT ... GTGATTGAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	4.29	491	22	22
A2	2.58	490	9	17
A3	2.05	501	13	8
A4	3.14	416	12	15
A5	3.3	249	9	8
A6	0.03	3549	0	2
A7	0.38	2991	6	17
A8	0.39	2817	12	10
A9	0.16	3426	6	5
A10	0.26	2454	8	5

>TRINITY_DN47372_c0_g3_i5 from sample A7 / Example spliced isoform

CCGAACTTGAAATTGAGGAAGAGGTAGGTGCAGAGGACGAGGAACATGAAGAAGTTCCCATTGAACTTGAAGGGGCTGATAAAGAAACTGCAGAACAGGAACAACCAAGCGATAAGCCTCGAAAAACCTCGAAGTTCATGTCGGAATATGAGCGTGCTAGAATACTAGGCACTCGAGCATTGCAAATTAGCATGAATGCA
CCTGTGATGGTTGAACTTGAAGGCGCGACTGATCCATTGGAGATTGCAATGAAAGAACTGAGAGAACGGAAGATTCCTTTTACGATTTGCCGCTATTTGCCTGATGGAAGGTGAGATAATTGTTTATTGCTTTAGTTGCATGGGATTGTAATATCTCCCAGATGCCCTTATAGTTGCATGGGATTGTAATATCTCCCAGA
TGCCCTTATTGGCCATCCAACACT

>TRINITY_DN47372_c0_g3_i4 from sample A7 / Example unspliced isoform:

AGAGCATTGCAAATCAGGTATGTGTCAATAAGTTACTTAGGTCGGTGAATATCGAATTTGATGTCTTTCATTGTGAGGTCAACTTCTTGTATTAGTAACTGGGGATTTTTCTTATTGATGAGTATGTTTACAAGACACTTGACTAGGAGACCTCTTCATTCCCTTCTTGATTTTATATTAGTACATTACTCATCAATTTT
ATACATATAATACATATCCTGGGAGAAGTAACATGGGTTCATGTTTCTTATTGCCAGAAACCCCCTAGCCCTGTTTCTTGCACTGGTTCTTGTTTCTGGTAAAATATCGAAGTGTAGGGTCAAATACAAGTCGGGATTCAATTAGAGAACTCTATTTTCAGAAAGCTCAGGTTACATTTTAGTTCAAGCATAATAAATTC
TGTCCATCAACTTGACATTTGCCTGTGGCAGCATGAATGCACCTGTCATGGTTGAACTTGAAGGCGAGACTGATCCATTGGAGgtacatttatttttgacagccctcttttattccttttctgttttccattttgaacgaatttgtagttatgcattggatttcattattgtaaattgcaaattgcgttaagagtatttg
gtaggacttaaaagtatcatttatttcgttttttcgacaattttatgatgcagtagttatttgaaaaacatttgtaatatcttgcctttttctgggtgattgaagATTGCAATGAAAGAACTGAGAGAACGGAAGATTCCTTTTACGATTTGCCGCTATTTGCCTGATGGAAGGTGAGATAATTGTTTATTGCTTTAGTT
GCATGGGATTGTAATATCTCCCAGATGCCCTTATAGTTGCATGGGATTGTAATATCTCCCAGATGCCCTTATTGGCCATCCAACACT