NA ----> NA
Intron 1 GTAGTTCTAA ... TGTTGGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 101 | 62 | 39 |
| A2 | 29.06 | 94 | 42 | 35 |
| A3 | 28.62 | 96 | 54 | 23 |
| A4 | 33.33 | 88 | 52 | 36 |
| A5 | 28.47 | 49 | 21 | 18 |
| A6 | 25.99 | 84 | 35 | 24 |
| A7 | 28.38 | 135 | 50 | 57 |
| A8 | 29.76 | 59 | 25 | 25 |
| A9 | 31.44 | 121 | 60 | 51 |
| A10 | 31.96 | 132 | 67 | 57 |
>TRINITY_DN107020_c12_g3_i4 from sample A3 / Example spliced isoformGGTGAATTTTCTGCCATCAATTTGGGCCATGGTACAAGGATTATAACTGCACTGAAACCTTAAGGTGGGAACCACGGGACACATTCCTTTTTCAGTGATGCAACTCAAAACAACCATTATGTAGTTTTTTCCAACTTGTTGGAAGTCGATATTTAGGATGGAAAGGGTTTTTCAGTCTCCTATGCAGATGGCGAGGAAAA
GTCACATTTGTGGAAACTGTGAGAATGTAAATCTCCCTTCTGCATGCTCAGCTTGTGTGAATGGCAGGCTAAATGAGATGTATAAACGTCTCAATGCATTGCAGTGTGATCGTGATTCATTACATAAAAGGTTGGATGCGAAGCTTATAGCCAAGATGTTGGCCAGCGTGAAGCAGATGAGCAGCGGCACTGGAGATTAA
TTCATGCTGAAAAGATTGCACAGTTAAAAGAAAGGCATCGTCTCAAGGAGAATCAACTTTCTCAAGGTTTCTTGTTTTGGAAAACTCATGCTTCCTTGGAATATGCCTTCTTGAAGATCTAGTGGGCAAGTCATTGGCTTGATCTGCTAGAGGACATGTATGCAATTTGCTTTGGTTGAGAGAAATTATGTATTTAAGAA
GTACATGTTGTCTGCTGCAGAAAAAGCTAAGCTTGAGGAGAAAACAAAGGATTTGAATATCAGAAAGAGCTTACTGGATCGAGCCTATATTGAGGTAGTAAGAAACTATACTTTTTCTACGTGCATTGCGTAAATTGTTGGATATTGTTTAATATGACTGTGGATTTGATTTTCATTTGAATCATGGATTTGCATGCTGT
ATTTTAAAAATAAGTAATTATCACGATGTTTGTTCTTGTCTAAGAAACAA
>TRINITY_DN107020_c12_g3_i5 from sample A3 / Example unspliced isoform:GGTGAATTTTCTGCCATCAATTTGGGCCATGGTACAAGGATTATAACTGCACTGAAACCTTAAGGTGGGAACCACGGGACACATTCCTTTTTCAGTGATGCAACTCAAAACAACCATTATGTAGTTTTTTCCAACTTGTTGGAAGTCGATATTTAGGATGGAAAGGGTTTTTCAGTCTCCTATGCAGgtagttctaagca
ttattgaaagaaacctattaacagaatgtttgatgctgggcatggatatctcaattctgtgcatttgttgggcagATGGCGAGGAAAAGTCACATTTGTGGAAACTGTGAGAATGTAAATCTCCCTTCTGCATGCTCAGCTTGTGTGAATGGCAGGCTAAATGAGATGTATAAACGTCTCAATGCATTGCAGTGTGATCG
TGATTCATTACATAAAAGGTTGGATGCGAAGCTTATAGCCAAGATGTTGGCCAGCGTGAAGCAGATGAGCAGCGGCACTGGAGATTAATTCATGCTGAAAAGATTGCACAGTTAAAAGAAAGGCATCGTCTCAAGGAGAATCAACTTTCTCAAGGTTTCTTGTTTTGGAAAACTCATGCTTCCTTGGAATATGCCTTCTT
GAAGATCTAGTGGGCAAGTCATTGGCTTGATCTGCTAGAGGACATGTATGCAATTTGCTTTGGTTGAGAGAAATTATGTATTTAAGAAGTACATGTTGTCTGCTGCAGAAAAAGCTAAGCTTGAGGAGAAAACAAAGGATTTGAATATCAGAAAGAGCTTACTGGATCGAGCCTATATTGAGGTAGTAAGAAACTATACT
TTTTCTACGTGCATTGCGTAAATTGTTGGATATTGTTTAATATGACTGTGGATTTGATTTTCATTTGAATCATGGATTTGCATGCTGTATTTTAAAAATAAGTAATTATCACGATGTTTGTTCTTGTCTAAGAAACAA