sp|Q84ZN6|CESA8_ORYSJ ----> Probable cellulose synthase A catalytic subunit 8 [UDP-forming]

Intron 1 GTTAAGATGA ... TGTTGTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	49.65	3	5	1
A2	40.16	13	13	4.5
A3	57.14	3	6	2
A4	63.64	2	2	5
A5	100	0	3	2
A6	66.67	1	4	0
A7	42.84	9	9	4.5
A8	33.33	2	2	0
A9	76.47	2	11	2
A10	53.33	7	9	7

>TRINITY_DN39053_c0_g1_i3 from sample A9 / Example spliced isoform

GCAAGCCGAAAATTCGGGGTTGCCGGCAATAGTAGGCTCGCAGGGAAGGATGGAGGAGACAGGAAGACGGCAGGAGAAGACTAATGGCGTGAGACAGAGGGGTAACGGAGGCCGAGGTGAGCCCTCAGACACGTCGATAGATGAAGGAATCTGCAATCGAGATAAGCTCGGCGCGACCAAGATGGGATCGAACACATCGT
TGAATGAATAGCAAGAGGTTTTAGGATTCTTCGATGGTTCCCAACTCTCTTTCCCTCCATTTAGAGATTTTGATTTTGAGGCTGCCCAGCCTTCCTGACAATGCAAGAAAGGATGAAAGTTACAATTCAAAGCTTTCCTTGAGTGAAATATATGAGCTCTAGTTGAAAAATTCTCTCCCAATTTTTCTAACATTTAGTTA
TGAGAATCGAGAACCCAATGAATATCAATCGTTCTCCTAATTTGTATGAAAAAACTGTAGTAAAGCCGAAACTATACCGAACTTATGCTTGCCTCCACTTGGTGCTTATGCTATCCTTTTTGTTGGGCTATCGTCTATCGAATCCCCTCGATGAAGC

>TRINITY_DN39053_c0_g1_i2 from sample A9 / Example unspliced isoform:

GCAAGCCGAAAATTCGGGGTTGCCGGCAATAGTAGGCTCGCAGGGAAGGATGGAGGAGACAGGAAGACGGCAGGAGAAGACTAATGGCGTGAGACAGAGGGGTAACGGAGGCCGAGGTGAGCCCTCAGACACGTCGATAGATGAAGGAATCTGCAATCGAGATAAGCTCGGCGCGACCAAGATGGGATCGAACACATCGT
TGAATGAATAGCAgttaagatgattcaggttttcgttggttaatggatttgaaatatcttggagtgaataacaatccaaatttggttttagtggtggactaagtcagggactgatgctttcagatctcaatgttgtgcagAGAGGTTTTAGGATTCTTCGATGGTTCCCAACTCTCTTTCCCTCCATTTAGAGATTTTGA
TTTTGAGGCTGCCCAGCCTTCCTGACAATGCAAGAAAGGATGAAAGTTACAATTCAAAGCTTTCCTTGAGTGAAATATATGAGCTCTAGTTGAAAAATTCTCTCCCAATTTTTCTAACATTTAGTTATGAGAATCGAGAACCCAATGAATATCAATCGTTCTCCTAATTTGTATGAAAAAACTGTAGTAAAGCCGAAACT
ATACCGAACTTATGCTTGCCTCCACTTGGTGCTTATGCTATCCTTTTTGTTGGGCTATCGTCTATCGAATCCCCTCGATGAAGC

Intron 2 GTTAAGATGA ... ATGCTTTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	60	2	5	1
A2	42.86	12	13	5
A3	57.14	3	6	2
A4	63.64	2	2	5
A5	100	0	3	2
A6	66.67	1	4	0
A7	41.18	10	9	5
A8	100	0	2	0
A9	76.47	2	11	2
A10	53.33	7	9	7

>TRINITY_DN34323_c0_g1_i3 from sample A7 / Example spliced isoform

GTCGGGGTAGTGGTGGTCTGAGGGGCAAGTGGGCGGGACGCAAGCCGAAAATTCGGGGTTGCCGGCAATAGTAGGCTCGCAGGGAAGGATGGAGGAGACAGGAAGACGGCAGGAGAAGACTAATGGCGTGAGACAGAGGGGTAACGGAGGCCGAGGTGAGCCCTCAGACACGTCGATAGATGAAGGAATCTGCAATCGAG
ATAAGCTCGGCGCGACCAAGATGGGATCGAACACATCGTTGAATGAATAGCAATCTCAATGTTGTGCAGAGAGGTTTTAGGATTCTTCGATGGTTCCCAACTCTCTTTCCCTCCATTTAGAGATTTTGATTTTGAGGCTGCCCAGCCTTCCTGACAATGCAAGAAAGGATGAAAGTTACAATTCAAAGCTTTCCTTGAGT
GAAATATATGAGCTCTAGTTGAAAAATTCTCTCCCAATTTTTCTAACATTTAGTTATGAGAATCGAGAACCCAATGAATATCAATCGTTCTCCTAATTTGTATGAAAAAACTGTAGTAAAGCCGAAACTATACCGAACTTATGCTTGCCTCCACTTGGTGCTTATGCTATCCTTTTTGTTGGGCTATCGTCTATCGAATC
CCCTCGATGAAGCTTATGGGGTTTGGATTCTAGCCTTTGCCTGCGAGCTTTGGTTTGCTTTCGAGTGGATTCTTGACTGCAACATGAGATGGCTGTGGGTTGATTACGCAACCTACCCAGAGAGACTTGCATGCAGATATAGTGGAGAATCTGCTTCAAAGCTTCCTTCCGTGGACATAATTGTCACTACAGCAGATCCT
TTCAAG

>TRINITY_DN34323_c0_g1_i2 from sample A7 / Example unspliced isoform:

GTCGGGGTAGTGGTGGTCTGAGGGGCAAGTGGGCGGGACGCAAGCCGAAAATTCGGGGTTGCCGGCAATAGTAGGCTCGCAGGGAAGGATGGAGGAGACAGGAAGACGGCAGGAGAAGACTAATGGCGTGAGACAGAGGGGTAACGGAGGCCGAGGTGAGCCCTCAGACACGTCGATAGATGAAGGAATCTGCAATCGAG
ATAAGCTCGGCGCGACCAAGATGGGATCGAACACATCGTTGAATGAATAGCAgttaagatgattcaggttttcgttggttaatggatttgaaatatcttggagtgaataacaatccaaatttggttttagtggtggactaagtcagggactgatgctttcagATCTCAATGTTGTGCAGAGAGGTTTTAGGATTCTTCGA
TGGTTCCCAACTCTCTTTCCCTCCATTTAGAGATTTTGATTTTGAGGCTGCCCAGCCTTCCTGACAATGCAAGAAAGGATGAAAGTTACAATTCAAAGCTTTCCTTGAGTGAAATATATGAGCTCTAGTTGAAAAATTCTCTCCCAATTTTTCTAACATTTAGTTATGAGAATCGAGAACCCAATGAATATCAATCGTTC
TCCTAATTTGTATGAAAAAACTGTAGTAAAGCCGAAACTATACCGAACTTATGCTTGCCTCCACTTGGTGCTTATGCTATCCTTTTTGTTGGGCTATCGTCTATCGAATCCCCTCGATGAAGCTTATGGGGTTTGGATTCTAGCCTTTGCCTGCGAGCTTTGGTTTGCTTTCGAGTGGATTCTTGACTGCAACATGAGAT
GGCTGTGGGTTGATTACGCAACCTACCCAGAGAGACTTGCATGCAGATATAGTGGAGAATCTGCTTCAAAGCTTCCTTCCGTGGACATAATTGTCACTACAGCAGATCCTTTCAAG