sp|Q8VYU7|PPA4_ARATH ----> Purple acid phosphatase 4
Intron 1 GTAAGTTGCT ... TCATGGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 0 | 3 | 0 | 0 |
| A2 | 5.88 | 16 | 1 | 0 |
| A3 | 22.22 | 7 | 2 | 0 |
| A4 | 11.11 | 8 | 1 | 1 |
| A5 | 50 | 3 | 3 | 2 |
| A6 | 13.56 | 51 | 8 | 0 |
| A7 | 22.22 | 42 | 12 | 3 |
| A8 | 19.32 | 71 | 17 | 7 |
| A9 | 24 | 57 | 18 | 6 |
| A10 | 19.23 | 42 | 10 | 0 |
>TRINITY_DN39810_c0_g1_i5 from sample A9 / Example spliced isoformTAAATATTCACATGTCATTTTCTCTGATGTCGCTCGCTTTGGACGATCAGGGAAATGGCTAATAAATTATATCTGCCATCGCCTTGTATTTTGCATTTTATCGTGACCAGAAACTGAAATCTTCAGGTTCACGCGAAATAAAAAAACAGTTATAACACAAAAATACTGTGCCATTGGATTCACATCACGTCCCGCTGCCA
TGCTATGCGTTCAAGATTAGAATCTGGGTTTCATGTCCTCTGATATAAATCTCAATTCCGTGACTTGGGCGTCGGCAGGATTGCAAGTACGATTGATTGTGTAAGCGCTTCACAAAATGACTTACTCTTGGCGAGTAACAGTCTTCACACAGACCATTATCAGCCTTGCTCTGTTCATGGTCGTGTTTGAGTTTCTTTCT
CCTGCCAGAATTCAGAGATATCATAGGAGATCCGAGCCTCTGGATTTATATTTCATCAGTGTAGGAGATGGGAAGAACACATTGGCAGACAAGAGGGCCATTGCTGAACAGATGAAGAAAACTGCGAAGGAATATGGGGTGCAATTTGTTGTTAGCATCGGTGATCGCGGGATCGGTGATAGTTTATTCAAGATTGTACA
TGAGGAAGTTCATTTGTTCCCATCATTGCAAGTTCCCTGGTACTCTGCCATAGGAGCTCATCAAGGACTGGGTGGGCCTAGATACTTCCAGAAGGAGATCTCAATTCCATTTCAGCATACTATGGATATTATCAGCATTGATACCACTGGGTTGGAGGATGCCATTAACAATGATTTCTTTCGAAGGGGTGGTCAGGATC
AGGTGGAATGGCTCAAGAAAGCATTAGCAGGCAGAACTGGAGATTGGTGCATAGTCATTGGACGTCATCCTTTGAAGAACTGTCAAGATGAAAGAATTGTAAAAAACAATAAACAAAACCTCCATGATTTGCTTTTACCTATATTTATGAAATATGGAGTGCATGTCTATTTGCATGGTCAAGAACATTTCAGTCAATAT
GTGCAAGACAATGGTATTGCTTACATTGGAAATCCAGATGGTAGCTTTGCAAACGACAGCAATGTCCTTCAAAATGAAACATGTTCTTGGGCCAAGGACTTGCAAAATGGATTCATTCTTTACCGAGTCAGCCCCATGGAAATGGAATTTTATTTCATGGATTCGAAGGGGAATACTTTACATAGAACAACTTTGCACCA
AAATGGAAGAGCAGTTCAGTAATATATCAGTGAAAGATCTATGTGAAATATCCTCTGTTTGACTTTAATGTTTATTTTGTATATGAATATTTTATCTGCTATTTGATTGTTTTTGGGTAATTTAAGCTGATTGTACAATTACGAGAAAATGTCTATCATGAGCTCTGATGCTGTGCAAAATATCAGAACCCATAAGAAGC
CAATACTCCCTGTTGAGTGCGGAAGTGCTCTTAATTACAGCGGCAAATACAAAGCGTCACTTCCAATAAAATAAATGATATATTGCTTTTCAAAATGGTGTGAAATTTCTAATGAATATATAAGCAAGCACTAGGATGATACTGAC
>TRINITY_DN39810_c0_g1_i8 from sample A9 / Example unspliced isoform:TAAATATTCACATGTCATTTTCTCTGATGTCGCTCGCTTTGGACGATCAGGGAAATGGCTAATAAATTATATCTGCCATCGCCTTGTATTTTGCATTTTATCGTGACCAGAAACTGAAATCTTCAGATTCACGCGAAATAAAAAAATAGTCATAACACAAAAATACTATACTGCCATGCTATGCGTTCAAGATTAGAATC
TGGGTTTCATGTCCTCTGATATAAATCTCAATTCCGTGACTTGGGCGTCGGCAGGATTGCAAGTACGATTGATTGTGTAAGCGCTTCACAAAATGACTTACTCTTGGCGAGTAACAGTCTTCACACAGACCATTATCAGCCTTGCTCTGTTCATGGTCGTGTTTGAGTTTCTTTCTCCTGCCAGAATTCAGAGATATCAT
AGGAGATCCGAGCCTCTGGATTTATATTTCATCAGTGTAGGAGATGGGAAGAACACATTGGCAGACAAGAGGGCCATTGCTGAACAGATGAAGAAAACTGCGAAGGAATATGGGGTGCAATTTGTTGTTAGCATCGGTGATCGCGGGATCGGTGATAGTTTATTCAAGATTGTACATGAGGAAGTTCATTTGTTCCCATC
ATTGCAAGTTCCCTGGTACTCTGCCATAGGAGCTCATCAAGGACTGGGTGGGCCTAGATACTTCCAGAAGGAGATCTCAATTCCATTTCAGCATACTATGGATATTATCAGCATTGATACCACTGGGTTGGAGGATGCCATTAACAATGATTTCTTTCGAAGGGGTGGTCAGGATCAGGTGGAATGGCTCAAGAAAGCAT
TAGCAGGCAGAACTGGAGATTGGTGCATAGTCATTGGACGTCATCCTTTGAAGAACTGTCAAGATGAAAGAATTGTAAAAAACAATAAACAAAACCTCCATGATTTGCTTTTACCTATATTTATGAAATATGGAGTGCATGTCTATTTGCATGGTCAAGAACATTTCAGTCAATATGTGCAAGACAATGGTATTGCTTAC
ATTGGAAATCCAGATGGTAGCTTTGCAAACGACAGCAATGTCCTTCAAAATGAAACATGTTCTTGGGCCAAgtaagttgcttccaaagtatttatacctccagtatacgatttttcatatgtattttcaattccttcctatatccaagcaatgccttttttgtttggaaaaatgagaaaactttacaaaaaaaattatat
ggcattactatcatggacagGGACTTGCAAAATGGATTCATTCTTTACCGAGTCAGCCCCATGGAAATGGTATAATCTTGCATTCTTCGCTGACACGTTGTTCTTTCAATCTATCAATCATGGCAGAAACTTAGAAGCATTTTGTGCACAATCTTTTTCTTGTGGACTGCAGGAATTTTATTTCATGGATTCGAAGGGGA
ATACTTTACATAGAACAACTTTGCACCAAAATGGAAGAGCAGTTCAGTAATATATCAGTGAAAGATCTATGTGAAATATCCTCTGTTTGACTTTAATGTTTATTTTGTATATGAATATTTTATCTGCTATTTGATTGTTTTTGGGTAATTTAAGCTGATTGTACAATTACGAGAAAATGTCTATCATGAGCTCTGATGCT
GTGCAAAATATCAGAACCCATAAGAAGCCAATACTCCCTGTTGAGTGCGGAAGTGCTCTTAATTACAGCGGCAAATACAAAGCGTCACTTCCAATAAAATAAATGATATATTGCTTTTCAAAATGGTGTGAAATTTCTAATGAATATATAAGCAAGCACTAGGATGATACTGAC
Intron 2 GTAAGACATC ... CATATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 10 | 9 | 0 | 2 |
| A2 | 27.27 | 4 | 2 | 1 |
| A3 | 27.27 | 4 | 2 | 1 |
| A4 | 13.54 | 6.5 | 1 | 1 |
| A5 | 5.88 | 8 | 1 | 0 |
| A6 | 3.51 | 41.3 | 2 | 1 |
| A7 | 7.56 | 49 | 1 | 7 |
| A8 | 12.82 | 78.3 | 7 | 16 |
| A9 | 6.67 | 56 | 3 | 5 |
| A10 | 12.1 | 54.5 | 8 | 7 |
>TRINITY_DN43928_c3_g1_i10 from sample A8 / Example spliced isoformATTTGAAAAAGCCACTGACAATACATTTTGTTTCAAGGTGTTTCATCCCTATAGTGCATAGTCATTGGACGTCATCCTTTGAAGAACTGTCAAGATGAAAGAATTGTAAAAAACAATAAACAAAACCTCCATGATTTGCTTTTACCTATATTTATGAAATATGGAGTGCATGTCTATTTGCATGGTCAAGAACATTTCAG
TCAATATGTGCAAGACAATGGTATTGCTTACATTGGAAATCCAGATGGTAGCTTTGCAAACGACAGCAATGTCCTTCAAAATGAAACATGTTCTTGGGCCAAGGACTTGCAAAATGGATTCATTCTTTACCGAGTCAGCCCCATGGAAATGGAATTTTATTTCATGGATTCGAAGGGGAATACTTTACATAGAACAACTT
TGCACCAAAATGGAAGAGCAGTTCAGTAATATATCAGTGAAAGATCTATGTGAAATATCCTCTGTTTGACTTTAATGTTTATTTTGTATATGAATATTTTATCTGCTATTTGATTGTTTTTGGGTAATTTAAGCTGATTGTACAATTACGAGAAAATGTCTATCATGAGCTCTGATGCTGTGCAAAATATCAGAACCCAT
AAGAAGCCAATACTCCCGGTTGAGTGCGGAAGTTGTCTTAATTACAGTGGCAAATACAAAGCGTCACTTCC
>TRINITY_DN43928_c3_g1_i8 from sample A8 / Example unspliced isoform:CTACTATAACTTTTCAGAATCTCTTTTTGCTTTTTTTAAAATGATTTAATCGATTGTTAGTTGTCAATCCATAACTTCATAATAAGGTCAGGCCCTCCTTTTTCAAAGTTTGAGGAAATGTTCTTTAAGACCCTTACATTGAGTAATAGCAGCATCCTTTAAAGAAGTCGGTATTTTTCTTATCCATGGAGACATTTATC
TTGTACGTTTTGACGATTGGGCCTAATCAGGTCCTGGTTAACAATATCTGACATGTCAATACCTTGCAGGTCAGGGCCTAATAAGGTTATGATTAACAATATCTGACATGTCAATACCTTGCAGGTGCATAGTCATTGGACGTCATCCTTTGAAGAACTGTCAAGATGAAAGAATTGTAAAAAACAATAAACAAAACCTC
CATGATTTGCTTTTACCTATATTTATGAAATATGGAGTGgtaagacatccttgaaatgtttttcccgatctgtattgctcaaagtaaactcatgttaatttcttacctcaaaggggcaaaacaaggcatgcacttacaggagtaattttgcacatatttcagCATGTCTATTTGCATGGTCAAGAACATTTCAGTCAATA
TGTGCAAGACAATGGTATTGCTTACATTGGAAATCCAGATGGTAGCTTTGCAAACGACAGCAATGTCCTTCAAAATGAAACATGTTCTTGGGCCAAGGACTTGCAAAATGGATTCATTCTTTACCGAGTCAGCCCCATGGAAATGGAATTTTATTTCATGGATTCGAAGGGGAATACTTTACATAGAACAACTTTGCACC
AAAATGGAAGAGCAGTTCAGTAATATATCAGTGAAAGATCTATGTGAAATATCCTCTGTTTGACTTTAATGTTTATTTTGTATATGAATATTTTATCTGCTATTTGATTGTTTTTGGGTAATTTAAGCTGATTGTACAATTACGAGAAAATGTCTATCATGAGCTCTGATGCTGTGCAAAATATCAGAACCCATAAGAAG
CCAATACTCCCGGTTGAGTGCGGAAGTTGTCTTAATTACAGTGGCAAATACAAAGCGTCACTTCC
Intron 3 GTATAATCTT ... TGGACTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40 | 3 | 0.5 | 2 |
| A2 | 0 | 15 | 1.1 | 0 |
| A3 | 28.57 | 5 | 1 | 2 |
| A4 | 20 | 8 | 1 | 2 |
| A5 | 40 | 3 | 1 | 2 |
| A6 | 8.93 | 51 | 4.3 | 5 |
| A7 | 21.74 | 54 | 5.7 | 15 |
| A8 | 16.22 | 62 | 14.5 | 12 |
| A9 | 23.53 | 65 | 10.3 | 20 |
| A10 | 16.98 | 44 | 2.1 | 9 |
>TRINITY_DN42781_c0_g1_i6 from sample A7 / Example spliced isoformAAATATTCACATGTCATTTTCTCTGATGTCGCTCGCTTTGGACGATCAGGGAAATGGCTAATAAATTATATCTGCCATCGCCTTGTATTTTGCATTTTATCGTGACCAGAAACTGAAATCTTCAGATTCACGCGAAATAAAAAAATAGTCATAACACAAAAATACTATACTGCCATGCTATGCGTTCAAGATTAGAATCT
GGGTTTCATGTCCTCTGATATAAATCTCAATTCCGTGACTTGGGCGTCGGCAGGATTGCAAGTACGATTGATTGTGTAAGCGCTTCACAAAATGACTTACTCTTGGCGAGTAACAGTCTTCACACAGACCATTATCAGCCTTGCTCTGTTCATGGTCGTGTTTGAGTTTCTTTCTCCTGCCAGAATTCAGAGATATCATA
GGAGATCCGAGCCTCTGGATTTATATTTCATCAGTGTAGGAGATGGGAAGAACACATTGGCAGAAAAGAGGGCCATTGCTGAACAGATGAAGAAAACTGCGAAGGAATATGGGGTGCAATTTGTTGTTAGCATCGGTGATCGCGGGATCGGTGATAGTTTATTCAAGATTGTACATGAGGAAGTTCATTTGTTCCCATCA
TTGCAAGTTCCCTGGTACTCTGCCATAGGAGCTCATCAAGGACTGGGTGGGCCTAGATACTTCCAGAAGGAGATCTCAATTCCATTTCAGCATACTATGGATATTATCAGCATTGATACCACTGGGTTGGAGGATGCCATTAACAATGATTTCTTTCGAAGGGGTGGTCAGGATCAGGTGGAATGGCTCAAGAAAGCATT
AGCAGGCAGAACTGGAGATTGGTGCATAGTCATTGGACGTCATCCTTTGAAGAACTGTCAAGATGAAAGAATTGTAAAAAACAATAAACAAAACCTCCATGATTTGCTTTTACCTATATTTATGAAATATGGAGTGCATGTCTATTTGCATGGTCAAGAACATTTCAGTCAATATGTGCAAGACAATGGTATTGCTTACA
TTGGAAATCCAGATGGTAGCTTTGCAAACGACAGCAATGTCCTTCAAAATGAAACATGTTCTTGGGCCAAGGACTTGCAAAATGGATTCATTCTTTACCGAGTCAGCCCCATGGAAATGGAATTTTATTTCATGGATTCGAAGGGGAATACTTTACATAGAACAACTTTGCACCAAAATGGAAGAGCAGTTCAGTAATAT
ATCAGTGAAAGATCTATGTGAAATATCCTCTGTTTGACTTTAATGTTTATTTTGTATATGAATATTTTATCTGCTATTTGATTGTTTTTGGGTAATTTAAGCTGATTGTACAATTACGAGAAAATGTCTATCATGAGCTCTGATGCTGTGCAAAATATCAGAACCCATAAGAAGCCAATACTCCCTGTTGAGTGCGGAAG
TGCTCTTAATTACAGCGGCAAATACAAAGCGTCACTTCCAATAAAATAAATGATATATTGCTTTTCAAAATGGTGTGAAATTTCTAATGAATATAT
>TRINITY_DN42781_c0_g1_i2 from sample A7 / Example unspliced isoform:AAATATTCACATGTCATTTTCTCTGATGTCGCTCGCTTTGGACGATCAGGGAAATGGCTAATAAATTATATCTGCCATCGCCTTGTATTTTGCATTTTATCGTGACCAGAAACTGAAATCTTCAGATTCACGCGAAATAAAAAAATAGTCATAACACAAAAATACTATACTGCCATGCTATGCGTTCAAGATTAGAATCT
GGGTTTCATGTCCTCTGATATAAATCTCAATTCCGTGACTTGGGCGTCGGCAGGATTGCAAGTACGATTGATTGTGTAAGCGCTTCACAAAATGACTTACTCTTGGCGAGTAACAGTCTTCACACAGACCATTATCAGCCTTGCTCTGTTCATGGTCGTGTTTGAGTTTCTTTCTCCTGCCAGAATTCAGAGATATCATA
GGAGATCCGAGCCTCTGGATTTATATTTCATCAGTGTAGGAGATGGGAAGAACACATTGGCAGAAAAGAGGGCCATTGCTGAACAGATGAAGAAAACTGCGAAGGAATATGGGGTGCAATTTGTTGTTAGCATCGGTGATCGCGGGATCGGTGATAGTTTATTCAAGATTGTACATGAGGAAGTTCATTTGTTCCCATCA
TTGCAAGTTCCCTGGTACTCTGCCATAGGAGCTCATCAAGGACTGGGTGGGCCTAGATACTTCCAGAAGGAGATCTCAATTCCATTTCAGCATACTATGGATATTATCAGCATTGATACCACTGGGTTGGAGGATGCCATTAACAATGATTTCTTTCGAAGGGGTGGTCAGGATCAGGTGGAATGGCTCAAGAAAGCATT
AGCAGGCAGAACTGGAGATTGGTGCATAGTCATTGGACGTCATCCTTTGAAGAACTGTCAAGATGAAAGAATTGTAAAAAACAATAAACAAAACCTCCATGATTTGCTTTTACCTATATTTATGAAATATGGAGTGCATGTCTATTTGCATGGTCAAGAACATTTCAGTCAATATGTGCAAGACAATGGTATTGCTTACA
TTGGAAATCCAGATGGTAGCTTTGCAAACGACAGCAATGTCCTTCAAAATGAAACATGTTCTTGGGCCAAGGACTTGCAAAATGGATTCATTCTTTACCGAGTCAGCCCCATGGAAATGgtataatcttgcattcttcgctgacacgttgttctttcaatctatcaatcatggcagaaacttagaagcattttgtgcaca
atctttttcttgtggactgcagGAATTTTATTTCATGGATTCGAAGGGGAATACTTTACATAGAACAACTTTGCACCAAAATGGAAGAGCAGTTCAGTAATATATCAGTGAAAGATCTATGTGAAATATCCTCTGTTTGACTTTAATGTTTATTTTGTATATGAATATTTTATCTGCTATTTGATTGTTTTTGGGTAATT
TAAGCTGATTGTACAATTACGAGAAAATGTCTATCATGAGCTCTGATGCTGTGCAAAATATCAGAACCCATAAGAAGCCAATACTCCC
Intron 4 GTAAGTTGCT ... TCATGGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 0 | 2.8 | 0 | 0 |
| A2 | 0 | 14 | 0 | 0 |
| A3 | 0 | 6.3 | 0 | 0 |
| A4 | 14.81 | 7 | 0 | 1 |
| A5 | 41.67 | 2.8 | 2 | 2 |
| A6 | 0 | 45.8 | 0 | 0 |
| A7 | 7.64 | 38.5 | 0 | 3 |
| A8 | 9.72 | 66.7 | 2 | 7 |
| A9 | 10.64 | 52.7 | 2 | 6 |
| A10 | 0 | 37.7 | 0 | 0 |
>TRINITY_DN43928_c3_g1_i10 from sample A8 / Example spliced isoformATTTGAAAAAGCCACTGACAATACATTTTGTTTCAAGGTGTTTCATCCCTATAGTGCATAGTCATTGGACGTCATCCTTTGAAGAACTGTCAAGATGAAAGAATTGTAAAAAACAATAAACAAAACCTCCATGATTTGCTTTTACCTATATTTATGAAATATGGAGTGCATGTCTATTTGCATGGTCAAGAACATTTCAG
TCAATATGTGCAAGACAATGGTATTGCTTACATTGGAAATCCAGATGGTAGCTTTGCAAACGACAGCAATGTCCTTCAAAATGAAACATGTTCTTGGGCCAAGGACTTGCAAAATGGATTCATTCTTTACCGAGTCAGCCCCATGGAAATGGAATTTTATTTCATGGATTCGAAGGGGAATACTTTACATAGAACAACTT
TGCACCAAAATGGAAGAGCAGTTCAGTAATATATCAGTGAAAGATCTATGTGAAATATCCTCTGTTTGACTTTAATGTTTATTTTGTATATGAATATTTTATCTGCTATTTGATTGTTTTTGGGTAATTTAAGCTGATTGTACAATTACGAGAAAATGTCTATCATGAGCTCTGATGCTGTGCAAAATATCAGAACCCAT
AAGAAGCCAATACTCCCGGTTGAGTGCGGAAGTTGTCTTAATTACAGTGGCAAATACAAAGCGTCACTTCC
>TRINITY_DN43928_c3_g1_i16 from sample A8 / Example unspliced isoform:ATGAAACATGTTCTTGGGCCAAgtaagttgcttccaaagtatttatacctctagtatacgatttttcatatgtattttcaattccttcctatatccaagcaatgccttttttgtttggaaaaatgagaaaacattacaaaaaaattatatggcattactatcatggacagGGACTTGCAAAATGGATTCATTCTTTACCG
AGTCAGCCCCATGGAAATGGTATAATCTTGCATTCTTCGCTGACACGTTGTTCTTTCAATCTATCAATCATGGCAGAAACTTAGAAGCATTTTGTGCACAATCTTTTTCTTGTGGACTGCAGGAATTTTATTTCATGGATTCGAAGGGGAATACTTTACATAGAACAACTTTGCACCAAAATGGAAGAGCAGTTCAGTAA
TATATCAGTGAAAGATCTATGTGAAATATCCTCTGTTTGACTTTAATGTTTATTTTGTATATGAATATTTTATCTGCTATTTGATTGTTTTTGGGTAATTTAAGCTGATTGTACAATTACGAGAAAATGTCTATCATGAGCTCTGATGCTGTGCAAAATATCAGAACCCATAAGAAGCCAATACTCCCGGTTGAGTGCGG
AAGTTGTCTTAATTACAGTGGCAAATACAAAGCGTCACTTCC