sp|Q2QQX6|ARFX_ORYSJ ----> Auxin response factor 24
Intron 1 GTGAGTATTA ... TGTAAAATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | -1 | 0 | 0 | 0 |
| A2 | -1 | 0 | 0 | 0 |
| A3 | -1 | 0 | 0 | 0 |
| A4 | -1 | 0 | 0 | 0 |
| A5 | 100 | 0 | 2 | 0 |
| A6 | 14.29 | 18 | 0 | 6 |
| A7 | 22.22 | 21 | 0 | 12 |
| A8 | 15.38 | 22 | 5 | 3 |
| A9 | 15.79 | 8 | 2 | 1 |
| A10 | 0 | 8 | 0 | 0 |
>TRINITY_DN33845_c0_g1_i1 from sample A9 / Example spliced isoformATTTTTTTTAAAGATAGCATAATGTAGATTTTGAAAGTTCAACCCTGTATAAATTCTGGGCGCTGTGAATCCTTAGTGGCCACTGCTAAAATAATTAGCTTGATGGGCATTAGATTAAGTGTTTGCCAAGGAATTTGTCTGAGTAGATTTTACATCTGTTTGTGGGACAAGGCCTCTATGGATTTTACAGAAATGAATAG
ATTTCCCAGAGTCTCACAAGATCAAGAAGGTAAGGGTAGTAAAAAAAGATTGGTTTCAGAAATGTCCTCTTCCCAAGCCACTGGTGAATCCACAAATCTTAATCGTTGTATTCTGGAAGATGCCCAGCAAATTAGGGTTCCAAGAAAAGGGTTTCGGCACAACGAAGTGGATGAAGGAGAATCACCATACCAATCACAAT
TTTCTGGAGAAAATGATGGTGCAACTGTATTTGGCCGGAAATTGAATGCACCAAGAAACTTGGAAGCAACAACTGAGCAGCATCCTGTGCTGGAATCGTGCCTTTCCAAAACTATTGCACGTCCCGTTAACAGGGACTGCATGTTGTTTGGTATTAATCTGATAGACCGGCGCGATTCAAGGGATGAACAACAGCAGATA
AGCTGTGACAGATTATCACAAGAAAGCCACTGTAAAGCTCAGCGAAATCCTACTCGAAGCCGTACCAAGGTATATAAACAAGAAGACAATTCTATAATTGGGAGATCTGTAGATCTTACAAAGTTTGAAGGTTATCCAGAGCTTATTGGTAAGCTAGAGGTGCTCTTCAATCTTCAAGGACAACTGCAGGATTCTAGTAA
AGGTTGGCTGGTTGTTTATAAAGATGTTGAGGGAGATATGATGCTTCTTGGGGACGGGCCATGGCAAGAGTTTTGCATAGTAGTCACAAAGATTTTTATATATACACGTGAGGTGGTTGATAAAATGGCTACCAACGCTGACCGAATATGAAGCTGCTTCAAGTGATCAGAATTTCTTATATTATGAAAAGTGTTGGAAC
TTCTGTGTACCTCATATTCAGATGTAGGAGGGAAGATATACTAACACTAGCAACAGGGTTGAAGTTAGAGTATTCTTTCATTAAGACTGCGTTTTGCTTAGAATGTTTCAGAGACTACGTAGCGTTTTAAAACTATATTAATAGCTTGCATGGCACCTTGCATGTTGCGCCTTTAAGACTGTGTTTTTCTTAGAATATTT
CAGAGACTAGTGACTGGATGGTGGATGTTTTAATGTATTTTAGTGACGGGATGTTACAATGCAGTTTTGTTTATCCTTAGAATATTTCAGAGACGGGTGACTGGATTGTAGATGTTTTAATGTATTTTAGTGACAGTA
>TRINITY_DN33845_c0_g1_i2 from sample A9 / Example unspliced isoform:ATTTTTTTTAAAGATAGCATAATGTAGATTTTGAAAGTTCAACCCTGTATAAATTCTGGGCGCTGTGAATCCTTAGTGGCCACTGCTAAAATAATTAGCTTGATGGGCATTAGATTAAGTGTTTGCCAAGGAATTTGTCTGAGTAGATTTTACATCTGTTTGTGGGACAAGGCCTCTATGGATTTTACAGAAATGAATAG
ATTTCCCAGAGTCTCACAAGATCAAGAAGGTAAGGGTAGTAAAAAAAGATTGGTTTCAGAAATGTCCTCTTCCCAAGCCACTGGTGAATCCACAAATCTTAATCGTTGTATTCTGGAAGATGCCCAGCAAATTAGGGTTCCAAGAAAAGGGTTTCGGCACAACGAAGTGGATGAAGGAGAATCACCATACCAATCACAAT
TTTCTGGAGAAAATGATGGTGCAACTGTATTTGGCCGGAAATTGAATGCACCAAGAAACTTGGAAGCAACAACTGAGCAGCATCCTGTGCTGGAATCGTGCCTTTCCAAAACTATTGCACGTCCCGTTAACAGGGACTGCATGTTGTTTGGTATTAATCTGATAGACCGGCGCGATTCAAGGGATGAACAACAGCAGATA
AGCTGTGACAGATTATCACAAGAAAGCCACTGTAAAGCTCAGCGAAATCCTACTCGAAGCCGTACCAAGGTATATAAACAAGAAGACAATTCTATAATTGGGAGATCTGTAGATCTTACAAAGTTTGAAGGTTATCCAGAGCTTATTGGTAAGCTAGAGGTGCTCTTCAATCTTCAAGGACAACTGCAGGATTCTAGTAA
AGGTTGGCTGGTTGTTTATAAAGATGTTGAGGGAGATATGATGCTTCTTGGGGACGGGCCATGGCAgtgagtattaattaatgtatttcatatatgttctttgttaagtaaatccagcaccttaggattttgttcgtttgattgacttttttatatattatatttttataagttttttctatttgtttatttatttgacc
tgtttttgtttgttgtaaaatagAGAGTTTTGCATAGTAGTCACAAAGATTTTTATATATACACGTGAGGTGGTTGATAAAATGGCTACCAACGCTGACCGAATATGAAGCTGCTTCAAGTGATCAGAATTTCTTATATTATGAAAAGTGTTGGAACTTCTGTGTACCTCATATTCAGATGTAGGAGGGAAGATATACTA
ACACTAGCAACAGGGTTGAAGTTAGAGTATTCTTTCATTAAGACTGCGTTTTGCTTAGAATGTTTCAGAGACTACGTAGCGTTTTAAAACTATATTAATAGCTTGCATGGCACCTTGCATGTTGCGCCTTTAAGACTGTGTTTTTCTTAGAATATTTCAGAGACTAGTGACTGGATGGTGGATGTTTTAATGTATTTTAG
TGACGGGATGTTACAATGCAGTTTTGTTTATCCTTAGAATATTTCAGAGACGGGTGACTGGATTGTAGATGTTTTAATGTATTTTAGTGACAGTA