NA ----> NA

Intron 1 GTGAGTGTTA ... TGTTTAGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	60.82	19	18	41
A2	60	13	8	31
A3	65.96	16	21	41
A4	51.16	21	15	29
A5	45.45	12	9	11
A6	25.31	90	19	42
A7	19.87	127	11	52
A8	18.18	180	15	65
A9	17.05	107	15	29
A10	11.96	92	8	17

>TRINITY_DN49043_c1_g1_i2 from sample A7 / Example spliced isoform

GAGAAAGAGATTTTTTCTTCTTTTAATTTATGTTCAACAATATGGTTGCAATGTTCTAATGAAATTGTCTTATACAGGGATTTATACAAAACACTGTTATGCCATCAAGACTATTAAAAAGGGTAGATCAGTGGAGTGTTTTTTAAAGCAGAGTAAGACATGTGATGTAAAGGATGATGAAGAATATGCTTTAACAAAAA
GATTATGTGAAAAAAAAGATGAATTGTACTTTGTATAAAATTATGAGAATGCATTCTCATATTTTAAACTTTAAATTTTATTATTTGTATGTAATACTGAAACCCTACATATTAATGAAATTATTACTCTTTTTTAGGGAAAGGGCAAAGCCCTTTCTCAAAACTCTCAAAGGATAGCTATGGCTAAAGCTACCATTGAG
AATGTCTACTCTTTGACTGCCCTTTCTCAAAAAC

>TRINITY_DN49043_c1_g1_i3 from sample A7 / Example unspliced isoform:

GAGAAAGAGATTTTTTCTTCTTTTAATTTATGTTCAACAATATGGTTGCAATGTTCTAATGAAATTGTCTTATACAGGGATTTATACAAAACACTGTTATGCCATCAAGACTATTAAAAAGGgtgagtgttatttttacctagcatatattattttttaacaacaatagtactttattaatcaataatttgttttgttta
gcagGTAGATCAGTGGAGTGTTTTTTAAAGCAGAGTAAGACATGTGATGTAAAGGATGATGAAGAATATGCTTTAACAAAAAGATTATGTGAAAAAAAAGATGAATTGTACTTTGTATAAAATTATGAGAATGCATTCTCATATTTTAAACTTTAAATTTTATTATTTGTATGTAATACTGAAACCCTACATATTAATGA
AATTATTACTCTTTTTTAGGGAAAGGGCAAAGCCCTTTCTCAAAACTCTCAAAGGATAGCTATGGCTAAAGCTACCATTGAGAATGTCTACTCTTTGACTGCCCTTTCTCAAAAAC