sp|P0C2F6|RNHX1_ARATH ----> Putative ribonuclease H protein At1g65750

Intron 1 GTAAATATTA ... GGTCTTACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	-1	0	0	1
A2	62.5	6	10	1
A3	100	0	2	2
A4	50	4	4	0
A5	0	2	0	0
A6	66.67	2	4	1
A7	64.29	5	9	1
A8	75	1	3	1
A9	61.54	5	8	4
A10	44.44	5	4	0

>TRINITY_DN96191_c0_g1_i1 from sample A2 / Example spliced isoform

GTAGCATACGTTGTTCCGTCCAGATACATGCAACCCTCGCCGAACGCCACGCCTCAGGCTTCTCCAGGGAGGAGAGCTCTTCAACCTTCGCCTGTTGGCAGGTGGACCTTCGATATCTCTTGGAAGAAGGCCTTCTGCTGGTAAATTGTCTCCGGCTATCAGGATTGCGGTAAGAAGAAAATGGTGGTCAGCCGATCGAA
GGCGATGGACCAGCCTGAGAATGCTACGGCCTTGCGAAAGAGCTGGAAAGAGCCCACTTTGCCATTGATGGGAGGAGCCAGCCCACTTTGCCATTGAAGGAGCAGAAGGAGAAGTGTTCCGCCCAGAACAAGGTGGACCTTAAGTTAGCCTTGCGTGCTTAGGTATGAAAGTCAGTATGCAAAAATCAAGTTTCTATCAT
AACAAGCTTGAAGACAATGTTTTGGTTCATCTCTATTGGTGGAAGACTTAAGCTTATTAAGGCGGTGCTTATTGGTATTCCAGTCTATTGGTGTTCCCTTTCACAAGTTCCTATCTCAATTAGTAACTCTTTGAGAAAGTATATTTTCAATTTCCTGTGGTCGGATGGGATTGACAGG

>TRINITY_DN96191_c0_g1_i2 from sample A2 / Example unspliced isoform:

GTAGCATACGTTGTTCCGTCCAGATACATGCAACCCTCGCCGAACGCCACGCCTCAGGCTTCTCCAGGGAGGAGAGCTCTTCAACCTTCGCCTGTTGGCAGGTGGACCTTCGATATCTCTTGGAAGAAGGCCTTCTGCTGGTAAATTGTCTCCGGCTATCAGGATTGCGGTAAGAAGAAAATGGTGGTCAGCCGATCGAA
GGCGATGGACCAGCCTGAGAATGCTACGGCCTTGCGAAAGAGCTGGAAAGAGCCCACTTTGCCATTGATGGGAGGAGCCAGCCCACTTTGCCATTGAAGGAGCAGAAGGAGAAGTGTTCCGCCCAGAACAAGGTGGACCTTAAGTTAGCCTTGCGTGCTTAGGTATGAAAGTCAGTATGCAAAAATCAAGTTTCTATCAT
AACAAGCTTGAAGACAATGTTTTGgtaaatattacatttgtgctcccttttaaagcatttaacctagacgaaggttttaagtacctggggtactttctaatatctaatggctacataattcaggattggttttcactggtttcaaaatttgaaaaaaggataaagcattggtcttacagGTTCATCTCTATTGGTGA