sp|Q9AWM9|RPF2_ORYSJ ----> Ribosome production factor 2 homolog

Intron 1 GTATTTCATA ... TGCAGCTGAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	44.28	283.5	69	225
A2	45.09	304	66	249
A3	45.64	330.5	83	277
A4	44.66	251.5	63	202
A5	47.08	171	49	152
A6	43.92	614	137	480
A7	44.8	1124	241	910
A8	43.5	581	115	446
A9	45.03	1062	192	868
A10	45.22	1016.5	183	838

>TRINITY_DN99217_c0_g1_i5 from sample A4 / Example spliced isoform

CTAAAACAAAACAGTGATTCCAAACGAGCTCAATTACTGCGATGTAGTTGTAATACTTTTATGTCGAAGAGAGGTTTTAGTTCATTGAGGTTTAGGTTGTGCTGATGGCTGAAGTCTGAATATTACCTAGAAAACCTAGAATTTTCAATTTCTCTCGGTTTCCGGCAGCTCCAAGATCGGTTTGGTTAATTTTGACGATT
CAGTTCAGTTCGGTTGAGCCGAGTTGAGGGCCTGCCGCCGCTGTTGCAGAGGATTGGATTCGTTTCAAATGCAAATGCAGCTTAGTTAAGAGTTGCCAGTTTCAATATTTGCTGAAAACATGCTGAAAGTTGTAAATCCTAAGACAAAGTCTGCAAAGAGGGCTCTTGAAAAGCGTGCTCCGAAGCTTGTTGAAAATGTA
AAGAAAATGCTAATTTTGCATGGCACAAAGACTAGCAAGGTATTGAATACAGTCTTGACAGACATATTTCATCTCAAGAGAGCTGGGGGAAATGCTATCAAGTACACCAGAAAGAATGATAAGATCCGGCCATTTGAAAGTGGGGGTGAAACTACTTTGGAGTTCCTTTCTCTGAAGACTGATTGCAGTCTTTTTGCATT
TGCCTCCCATTCGAAGAAGAGGCCAAACAATCTTGTTTTAGGGAGAACATATGATCATCACATATATGATCTGATTGAGGTTGGTGTGGAAAATTTCAGTTCAATGGAGTCTTTTGGTTATGGCAAGAAATTATCCCCACAAGTAGGCTCAAAGCCCTTTTTTGCCTTCATTGGGGAAGGTTTTGAGACCAAGGAGCAAC
TTAAACATCTGAAAGAGGTTTTGCTTGATATGTTCAGGGGGGAGGTTGTGGAAACAATAAATCTTGCGGGTCTAGATCGCGTATTTGTATGTACAGCAGTGGGTGATGACAAGGTTCGTTTCATGCATTGTGCAATACGTCTGAAAAAATCGGGCACAATGGTTCCACGTATTGAACTAGTTGAAATTGGACCTTCAATG
GACCTTGTAAACAGACGCCATCGACTTCCAAATGAGGATGTTAGAAAAGATGCCATGAAATCTTCTGATGTGAAACCCAGAAAGAAGGTGAAGAATGTTGGTAAGGACCTTATATCTGGAAAAGTTGGAAAGATTTATGTTCCCAAGCAAGAGGTAGGAGATATGGCACTAGCTAAAATGAAAGGTTTGAAGAGGGAGCG
CAGAGAAGCCGCAGCTGCCCATGCAGAAAATAAGACTACCATAAACAAGAAGCAGAAGACAGGCTAGAAAATATCTGTCACAATTTTGGTAAACGGGGAACAATATTTCACTCTTCTTCAGTAGGCAGGGCTCCTCTAGTTTCACCATTTGTTTTAACCTGCAGTACTGGCTCTTGCCTGCTAGTTGTAGTTTCAATTTT
TATATATTCTCATTGAGGTGGAATATACCATTAGGAGAATGGGTAGAATAGTGACCGTGTTTAATGCTTTTCCTTCTCTATGTAATGTTTTAACTTCTTTTATTTGCTTCATGCAATTATTGAGTCAGCAATTTCAAGATTTGCTCTGAATGCTCTTATTTTGGTTACCCACACTGCTGCTCTGATCTGTTAGCAATTAA
TATTAGAGCAAGTGCTTCAGGC

>TRINITY_DN99217_c0_g1_i3 from sample A4 / Example unspliced isoform:

CTAAAACAAAACAGTGATTCCAAACGAGCTCAATTACTGCGATGTAGTTGTAATACTTTTATGTCGAAGAGAGGTTTTAGTTCATTGAGGTTTAGGTTGTGCTGATGGCTGAAGTCTGAATATTACCTAGAAAACCTAGAATTTTCAATTTCTCTCGGTTTCCGGCAGCTCCAAGATCGGTTTGGTTAATTTTGACGATT
CAGTTCAGTTCGGTTGAGCCGAGTTGAGGGCCTGCCGCCGCTGTTGCAGAGGATTGGATTCGTTTCAAATGCAAATGCAGCTTAGTTAAGAGgtatttcatactaatttattcagtcatagttgaaatctgaatattaccgcgaatacctagaatttgcaatttctctcggtttccggcagtcccatagtattggtttgg
tttattacttcgtacctctccccttggtcttcgctcctgctcgaccaataatttttttttaatcacacggatgggcgcgcagccctcaagtgatggaaaatcacaaataaggtcatgaaagctaaaggtagaaaagcacggattaggtttacacgagaacacacggcatcaatgtcaaaatagggagttggcgataggat
tggtttggttatttttgacgattcagttcagttaggttgagccgagttgaggccctgccgccgctgttgcagaggattggattcgtttcaaatgcaaatgcagctgagTTGCCAGTTTCAATATTTGCTGAAAACATGCTGAAAGTTGTAAATCCTAAGACAAAGTCTGCAAAGAGGGCTCTTGAAAAGCGTGCTCCGAA
GCTTGT

Intron 2 GTTTGCTAGT ... TTTGATGTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	31.98	285	6	134
A2	31.38	293	4	134
A3	26.88	302	3	111
A4	33.9	193	1	99
A5	29.05	127	2	52
A6	28.34	1168	0	462
A7	25.91	1561	12	546
A8	28.95	1536	7	626
A9	27.62	1591	6	607
A10	27.85	1487	2	574

>TRINITY_DN45643_c0_g1_i8 from sample A7 / Example spliced isoform

TTAATTTCTAAAACAAAACAGTGATTCCAAACGAGCTCAATTACTGCGATGTAGTTGTAATACTTTTATGTCGAAGAGAGGTTTTAGTTCATTGAGGTTTAGGTTGTGCTGATGGCTGAAGTCTGAATATTACCTAGAAAACCTAGAATTTTCAATTTCTCTCGGTTTCCGGCAGCTCCAAGATCGGTTTGGTTAATTTT
GACGATTCAGTTCAGTTCGGTTGAGCCGAGTTGAGGGCCTGCCGCCGCTGTTGCAGAGGATTGGATTCGTTTCAAATGCAAATGCAGCTTAGTTAAGAGTTGCCAGTTTCAATATTTGCTGAAAACATGCTGAAAGTTGTAAATCCTAAGACAAAGTCTGCAAAGAGGGCTCTTGAAAAGCGTGCTCCGAAGCTTGTTGA
AAATGTAAAGAAAATGCTAATTTTGCATGGCACAAAGACTAGCAAGGTATTGAATACAGTCTTGACAGACATATTTCATCTCAAGAGAGCTGGGGGAAATGCTATCAAGTACACCAGAAAGAATGATAAGATCCGGCCATTTGAAAGTGGGGGTGAAACTACTTTGGAGTTCCTTTCTCTGAAGACTGATTGCAGTCTTT
TTGCATTTGCCTCCCATTCGAAGAAGAGGCCAAACAATCTTGTTTTAGGGAGAACATATGATCATCACATATATGATCTGATTGAGGTTGGTGTGGAAAATTTCAGTTCAATGGAGTCTTTTGGTTATGGCAAGAAATTATCCCCACAAGTAGGCTCAAAGCCCTTTTTTGCCTTCATTGGGGAAGGTTTTGAGACCAAG
GAGCAACTTAAACATCTGAAAGAGGTTTTGCTTGATATGTTCAGGGGGGAGGTTGTGGAAACAATAAATCTTGCGGGTCTAGATCGCGTATTTGTATGTACAGCAGTGGGTGATGACAAGGTTCGTTTCATGCATTGTGCAATACGTCTGAAAAAATCGGGCACAATGGTTCCACGTATTGAACTAGTTGAAATTGGACC
TTCAATGGACCTTGTAAACAGACGCCATCGACTTCCAAATGAGGATGTTAGAAAAGATGCCATGAAATCTTCTGATGTGAAACCCAGAAAGAAGGTGAAGAATGTTGGTAAGGACCTTATATCTGGAAAAGTTGGAAAGATTTATGTTCCCAAGCAAGAGGTAGGAGATATGGCACTAGCTAAAATGAAAGGTTTGAAGA
GGGAGCGCAGAGAAGCCGCAGCTGCCCATGCAGAAAATAAGACTACCATAAACAAGAAGCAGAAGACAGGCTAGAAAATATCTGTCACAATTTTGGTTGTGGAGTATGCCAAGCAATGTGACGTTTGGCAAAGGGTTGGAAGCTTTGTGACGGATTAGATGCAATTGCAACCAATTGTGGTTGAAGGGCATTTTGATTGA
TGAGCAATTGATTTTATTGGGCGTATTTATCTACTTGCGAGGTTTTATGGGGCAGAGTACATTATTATGACCATTGACTACTTGACATAATTCAATAAGGTCTCTGTGCAACCATTGTAGTGTTGACAATGTTGTGAAGTTTTGGTTTTGAAAATATTGTTATTTGTGGACCCTGACTAGTCATCAGAGAAGCACTTTGT
GAATGAAACAATTGCAGTGCTTTAGTTCCTTAGCGCTCCATGCTCGGGGCTCTAAG

>TRINITY_DN45643_c0_g1_i6 from sample A7 / Example unspliced isoform:

TTAATTTCTAAAACAAAACAGTGATTCCAAACGAGCTCAATTACTGCGATGTAGTTGTAATACTTTTATGTCGAAGAGAGGTTTTAGTTCATTGAGGTTTAGGTTGTGCTGATGGCTGAAGTCTGAATATTACCTAGAAAACCTAGAATTTTCAATTTCTCTCGGTTTCCGGCAGCTCCAAGATCGGTTTGGTTAATTTT
GACGATTCAGTTCAGTTCGGTTGAGCCGAGTTGAGGGCCTGCCGCCGCTGTTGCAGAGGATTGGATTCGTTTCAAATGCAAATGCAGCTTAGTTAAGAGTTGCCAGTTTCAATATTTGCTGAAAACATGCTGAAAGTTGTAAATCCTAAGACAAAGTCTGCAAAGAGGGCTCTTGAAAAGCGTGCTCCGAAGCTTGTTGA
AAATGTAAAGAAAATGCTAATTTTGCATGGCACAAAGACTAGCAAGGTATTGAATACAGTCTTGACAGACATATTTCATCTCAAGAGAGCTGGGGGAAATGCTATCAAGTACACCAGAAAGAATGATAAGATCCGGCCATTTGAAAGTGGGGGTGAAACTACTTTGGAGTTCCTTTCTCTGAAGACTGATTGCAGTCTTT
TTGCATTTGCCTCCCATTCGAAGAAGAGGCCAAACAATCTTGTTTTAGGGAGAACATATGATCATCACATATATGATCTGATTGAGGTTGGTGTGGAAAATTTCAGTTCAATGGAGTCTTTTGGTTATGGCAAGAAATTATCCCCACAAGTAGGCTCAAAGCCCTTTTTTGCCTTCATTGGGGAAGGTTTTGAGACCAAG
GAGCAACTTAAACATCTGAAAGAGGTTTTGCTTGATATGTTCAGGGGGGAGGTACGATTCTCCTTTCCTCAGTTATTTCTTGGAATATTAATGTTGTAATTGACTGTTCTGTTATAATAATTTTATTGATGGAAATACGATGATAAATATTTTCTTGTAAGTATTACACACATAAATACAATAACGCATGGCTGGTCAGG
TTGTGGAAACAATAAATCTTGCGGGTCTAGATCGCGTATTTGTATGTACAGCAGTGGGTGATGACAAGgtttgctagtcttcctgctttcaaatttcttattatagttctaatttaagtgctccagggcattggattttcgttgtatgcattccaaggacagaaattgtcggtggacttttgatttagaaagttgcaggg
gtgacacaagtctttatttctcaattggggatttaatagtctgcccttcagagcttctgagaatctcttccttttttggtttacaagtatcgtgggtttgattttgatgtagGTTCGTTTCATGCATTGTGCAATACGTCTGAAAAAATCGGGCACAATGGTTCCACGTATTGAACTAGTTGAAATTGGACCTTCAATGG
ACCTTGTAAACAGACGCCATCGACTTCCAAATGAGGATGTTAGAAAAGATGCCATGAAATCTTCTGATGTGAAACCCAGAAAGAAGGTGAAGAATGTTGGTAAGGACCTTATATCTGGAAAAGTTGGAAAGATTTATGTTCCCAAGCAAGAGGTAGGAGATATGGCACTAGCTAAAATGAAAGGTTTGAAGAGGGAGCGC
AGAGAAGCCGCAGCTGCCCATGCAGAAAATAAGACTACCATAAACAAGAAGCAGAAGACAGGCTAGAAAATATCTGTCACAATTTTGGTAAACGGGGAACAATATTTCACTCTTCTTCAGTAGGCAGGGCTCCTCTAGTTTCACCATTTGTTTTAACCTGCAGTACTGGCTCTTGCCTGCTAGTTGTAGTTTCAATTTTT
ATATATTCTCATTGAGGTGGAATATACCATTAGGAGAATGGGTAGAATAGTGACCGTGTTTAATGCTTTTCCTTCTCTATGTAATGTTTTAACTTCTTTTATTTGCTTCATGCAATTATTGAGTCAGCAATTTCAAGATTTGCTCTGAATGCTCTTATTTTGGTTACCCACACTGCTGCTCTGATCTGTTAGCAATTAAT
ATTAGAGCAAGTGCTTCAGGCCTCTTGATATTTGAGTGTTAGGATATATGTGGTCATTTTTTTATTCTCTCTAAATAAATTGAGATAACTTTCATTAATAA

Intron 3 GTATTTTCTA ... CTTTGTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	17.45	246	45	59
A2	21.12	183	50	48
A3	18.6	210	40	56
A4	18.5	130	23	36
A5	21.85	93	29	23
A6	20.77	994	182	339
A7	21.85	1173	226	430
A8	20.09	1440	247	477
A9	20.33	1440	275	460
A10	21.1	1006	233	305

>TRINITY_DN101350_c0_g2_i2 from sample A5 / Example spliced isoform

TACTTTTATGTCGAAGAGAGGTTTTAGTTCATTGAGGTTTAGGTTGTGCTGATGGCTGAAGTCTGAATATTACCTAGAAAACCTAGAATTTTCAATTTCTCTCGGTTTCCGGCAGCTCCAAGATCGGTTTGGTTAATTTTGACGATTCAGTTCAGTTCGGTTGAGCCGAGTTGAGGGCCTGCCGCCGCTGTTGCAGAGGA
TTGGATTCGTTTCAAATGCAAATGCAGCTTAGTTAAGAGTTGCCAGTTTCAATATTTGCTGAAAACATGCTGAAAGTTGTAAATCCTAAGACAAAGTCTGCAAAGAGGGCTCTTGAAAAGCGTGCTCCGAAGCTTGTTGAAAATGTAAAGAAAATGCTAATTTTGCATGGCACAAAGACTAGCAAGGTATTGAATACAGT
CTTGACAGACATATTTCATCTCAAGAGAGCTGGGGGAAATGCTATCAAGTACACCAGAAAGAATGATAAGATCCGGCCATTTGAAAGTGGGGGTGAAACTACTTTGGAGTTCCTTTCTCTGAAGACTGATTGCAGTCTTTTTGCATTTGCCTCCCATTCGAAGAAGAGGCCAAACAATCTTGTTTTAGGGAGAACATATG
ATCATCACATATATGATCTGATTGAGGTTGGTGTAGAAAATTTCAGTTCAATGGAGTCTTTTGGTTATGGCAAGAAATTATCCCCACAAGTAGGCTCAAAGCCCTTTTTTGCCTTCATTGGGGAAGGTTTTGAGACCAAGGAGCAACTTAAACATCTGAAAGAGGTTTTGCTTGATATGTTCAGGGGGGAGGTTGTGGAA
ACAATAAATCTTGCGGGTCTAGATCGCGTATTTGTATGTACAGCAGTGGGTGATGACAAGGTTCGTTTCATGCATTGTGCAATACGTCTGAAAAAATCGGGCACAATGGTTCCACGTATTGAACTAGTTGAAATTGGACCTTCAATGGACCTTGTAAACAGACGCCATCGACTTCCAAATGAGGATGTTAGAAAAGATGC
CATGAAATCTTCTGATGTGAAACCCAGAAAGAAGGTGAAGAATGTTGGTAAGGACCTTATATCTGGAAAAGTTGGAAAGATTTATGTTCCCAAGCAAGAGGTAGGAGATATGGCACTAGCTAAAATGAAAGGTTTGAAGAGGGAGCGCAGAGAAGCCGCAGCTGCCCATGCAGAAAATAAGACTACCATAAACAAGAAGC
AGAAGACAGGCTAGAAAATATCTGTCACAATTTTGGTAAACGGGGAACAATATTTCACTCTTCTTCAGTAGGCAGGGCTCCTCTAGTTTCACCATTTGTTTTAACCTGCAGTACTGGCTCTTGCCTGCTAGTTGTAGTTTCAATTTTTATATATTCTCATTGAGGTGGAATATACCATTAGGAGAATGGGTAGAATAGTG
ACCGTGTTTAATGCTTTTCCTTCTCTATGTAATGTTTTAACTTCTTTTATTTGCTTCATGCAATTATTGAGTCAGCAATTTCAAGATTTGCTCTGAATGCTCTTATTTTGGTTACCCACACTGCTGCTCTGATCTGTTAGCAATTAATATTAGAGCAAGTGCTTCAGGCCTCTTGATAAAAA

>TRINITY_DN101350_c0_g2_i1 from sample A5 / Example unspliced isoform:

TACTTTTATGTCGAAGAGAGGTTTTAGTTCATTGAGGTTTAGGTTGTGCTGATGGCTGAAGTCTGAATATTACCTAGAAAACCTAGAATTTTCAATTTCTCTCGGTTTCCGGCAGCTCCAAGATCGGTTTGGTTAATTTTGACGATTCAGTTCAGTTCGGTTGAGCCGAGTTGAGGGCCTGCCGCCGCTGTTGCAGAGGA
TTGGATTCGTTTCAAATGCAAATGCAGCTTAGTTAAGAGTTGCCAGTTTCAATATTTGCTGAAAACATGCTGAAAGTTGTAAATCCTAAGACAAAGTCTGCAAAGAGGGCTCTTGAAAAGCGTGCTCCGAAGCTTGTTGAAAATGTAAAGAAAATGCTAATTTTGCATGGCACAAAGACTAGCAAGGTATTGAATACAGT
CTTGACAGACATATTTCATCTCAAGAGAGCTGGGGGAAATGCTATCAAGTACACCAGAAAGAATGATAAGATCCGGCCATTTGAAAGTGGGGGTGAAACTACTTTGGAGTTCCTTTCTCTGAAGACTGATTGCAGTCTTTTTGCATTTGCCTCCCATTCGAAGAAGAGGCCAAACAATCTTGTTTTAGGGAGAACATATG
ATCATCACATATATGATCTGATTGAGGTTGGTGTAGAAAATTTCAGTTCAATGGAGTCTTTTGGTTATGGCAAGAAATTATCCCCACAAGTAGGCTCAAAGCCCTTTTTTGCCTTCATTGGGGAAGGTTTTGAGACCAAGGAGCAACTTAAACATCTGAAAGAGGTTTTGCTTGATATGTTCAGGGGGGAGGTTGTGGAA
ACAATAAATCTTGCGGGTCTAGATCGCGTATTTGTATGTACAGCAGTGGGTGATGACAAGGTTCGTTTCATGCATTGTGCAATACGTCTGAAAAAATCGGGCACAATGGTTCCACGTATTGAACTAGTTGAAATTGGACCTTCAATGGACCTTGTAAACAGACGCCATCGACTTCCAAATGAGGATGTTAGAAAAGATGC
CATGAAATCTTCTGATGTGAAACCCAGAAAGAAGGTGAAGAATGTTGGTAAGGACCTTATATCTGGAAAAGTTGGAAAGATTTATGTTCCCAAGCAAGAGgtattttctattgcactgctttcaagtatgtttctaacaccatgttttgtgaacaagggcctcttctcttgtttattttctattgctccactttcaagta
tatttctggtatacaccatgtttcgtgaacaagggattcttcctttgtttcttatgtgagcctacttgtgctctctttgtgcagGTAGGAGATATGGCACTAGCTAAAATGAAAGGTTTGAAGAGGGAGCGCAGAGAAGCCGCAGCTGCCCATGCAGAAAATAAGACTACCATAAACAAGAAGCAGAAGACAGGCTAGAA
AATATCTGTCACAATTTTGGTAAACGGGGAACAATATTTCACTCTTCTTCAGTAGGCAGGGCTCCTCTAGTTTCACCATTTGTTTTAACCTGCAGTACTGGCTCTTGCCTGCTAGTTGTAGTTTCAATTTTTATATATTCTCATTGAGGTGGAATATACCATTAGGAGAATGGGTAGAATAGTGACCGTGTTTAATGCTT
TTCCTTCTCTATGTAATGTTTTAACTTCTTTTATTTGCTTCATGCAATTATTGAGTCAGCAATTTCAAGATTTGCTCTGAATGCTCTTATTTTGGTTACCCACACTGCTGCTCTGATCTGTTAGCAATTAATATTAGAGCAAGTGCTTCAGGCCTCTTGATAAAAA

Intron 4 GTATTTCATA ... GGGCGCGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	10.31	59.5	5	9
A2	3.1	61.5	1	3
A3	3.25	74	4	1
A4	7.36	59.5	4.5	5
A5	5.69	50.5	1	5
A6	3.6	126.5	4.5	5
A7	4.12	225	12.5	7
A8	2.01	109.5	0	4.5
A9	3.08	188	6.5	5.5
A10	4.88	173.5	6	12

>TRINITY_DN42402_c0_g1_i2 from sample A6 / Example spliced isoform

TGGGTTTTAGGCTCTGCCGCCGCTGTTGTAGATGATTGGTTAATTTCAAACTCGCTTTGTTTTGTATACGGCAGCTCCAGAGGATTGGTTTGGTTAATTTTGACGATTCAGTTCAGTTCGGTTGAGCCGAGTTGAGGGCCTGCCGCCGCTGTTGCAGAGGATTGGATTCGTTTCAAATGCAAATGCAGCTTAGTTAAGAG


CCCTCAAGTGATGGAAAATCACAAATAAGGTCATGAAAGCTAAAGGTAGAAAAGCACGGATTAGGTTTACACGAGAACACACGGCATCAATGTCAAAATAGGGAGTTGGCGAT

>TRINITY_DN42402_c0_g1_i7 from sample A6 / Example unspliced isoform:

TGCAAATGCAGCTTAGTTAAGAGgtatttcatactaatttattcagtcatagttgaaatctgaatattaccgcgaatacctagaatttgcaatttctctcggtttccggcagtcccatagtattggtttggtttattacttcgtacctctccccttggtcttcgctcctgctcgaccaataatttttttttaatcacacg
gatgggcgcgcagCCCTCAAGTGATGGAAAATCACAAATAAGGTCATGAAAGCTAAAGGTAGAAAAGCACGGATTAGGTTTACACGAGAACACACGGCATCAATGTCAAAATAGGGAGTTGGCGAT

Intron 5 GTACGATTCT ... GGCTGGTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	17.11	159.9	33	9.5
A2	16.76	158.9	32	5.2
A3	20	172	43	5.5
A4	17.12	92	19	5.4
A5	14.63	70	12	7.1
A6	15.55	545.9	100.5	17.9
A7	16.38	829.8	162.5	39
A8	15.94	733	139	26.8
A9	17.54	841.8	179.1	30.7
A10	14.5	684	116	24.2

>TRINITY_DN119262_c0_g2_i5 from sample A1 / Example spliced isoform

TGTAGTTGTAATACTTTTATGTCGAAGAGAGGTTTTAGTTCATTGAGGTTTAGGTTGTGCTGATGGCTGAAGTCTGAATATTACCTAGAAAACCTAGAATTTTCAATTTCTCTCGGTTTCCGGCAGCTCCAAGATCGGTTTGGTTAATTTTGACGATTCAGTTCAGTTCGGTTGAGCCGAGTTGAGGGCCTGCCGCCGCT
GTTGCAGAGGATTGGATTCGTTTCAAATGCAAATGCAGCTTAGTTAAGAGTTGCCAGTTTCAATATTTGCTGAAAACATGCTGAAAGTTGTAAATCCTAAGACAAAGTCTGCAAAGAGGGCTCTTGAAAAGCGTGCTCCGAAGCTTGTTGAAAATGTAAAGAAAATGCTAATTTTGCATGGCACAAAGACTAGCAAGGTA
TTGAATACAGTCTTGACAGACATATTTCATCTCAAGAGAGCTGGGGGAAATGCTATCAAGTACACCAGAAAGAATGATAAGATCCGGCCATTTGAAAGTGGGGGTGAAACTACTTTGGAGTTCCTTTCTCTGAAGACTGATTGCAGTCTTTTTGCATTTGCCTCCCATTCGAAGAAGAGGCCAAACAATCTTGTTTTAGG
GAGAACATATGATCATCACATATATGATCTGATTGAGGTTGGTGTGGAAAATTTCAGTTCAATGGAGTCTTTTGGTTATGGCAAGAAATTATCCCCACAAGTAGGCTCAAAGCCCTTTTTTGCCTTCATTGGGGAAGGTTTTGAGACCAAGGAGCAACTTAAACATCTGAAAGAGGTTTTGCTTGATATGTTCAGGGGGG
AGGTTGTGGAAACAATAAATCTTGCGGGTCTAGATCGCGTATTTGTATGTACAGCAGTGGGTGATGACAAGGTTCGTTTCATGCATTGTGCAATACGTCTGAAAAAATCGGGCACAATGGTTCCACGTATTGAACTAGTTGAAATTGGACCTTCAATGGACCTTGTAAACAGACGCCATCGACTTCCAAATGAGGATGTT
AGAAAAGATGCCATGAAATCTTCTGATGTGAAACCCAGAAAGAAGGTGAAGAATGTTGGTAAGGACCTTATATCTGGAAAAGTTGGAAAGATTTATGTTCCCAAGCAAGAGGTAGGAGATATGGCACTAGCTAAAATGAAAGGTTTGAAGAGGGAGCGCAGAGAAGCCGCAGCTGCCCATGCAGAAAATAAGACTACCAT
AAACAAGAAGCAGAAGACAGGCTAGAAAATATCTGTCACAATTTTGGTAAACGGGGAACAATATTTCACTCTTCTTCAGTAGGCAGGGCTCCTCTAGTTTCACCATTTGTTTTAACCTGCAGTACTGGCTCTTGCCTGCTAGTTGTAGTTTCAATTTTTATATATTCTCATTGAGGTGGAATATACCATTAGGAGAATGG
GTAGAATAGTGACCGTGTTTAATGCTTTTCCTTCTCTATGTAATGTTTTAACTTCTTTTATTTGCTTCATGCAATTATTGAGTCAGCAATTTCAAGATTTGCTCTGAATGCTCTTATTTTGGTTACCCACACTGCTGCTCTGATCTGTTAGCAATTAATATTAGAGCAAGTGCTTCAGGCCTCTTGATATTTGAGTGTTA
GGATATATGTGGTCATTTTTTTATTCTCTCTAAATAAATTGAGATAACTTTCATTAATACTAAAGTGTTACAAAATGTGTAAGGCTATTCTACAATGGAAAAAGGGCCCGCAAAGGTGAGCCGTTAACTATAGTTATCAGCCTATTGGACTCTATTAACTATAGAATATCATGACAGAAGATGTCATCAAAAGCGATAGT
GGTGCTATAAAAACCTTTCACATACCCTCTTTTTCCAGAGAGATAAAGACAAAAATATAAAGTCCTTACCATCAATACATCATAAGCAAGGGCATAGCCACTCCACGACAACCCATCCATCCATACGGCTAAACAGGGTTTCTTTGCAAATCTCTGTG

>TRINITY_DN119262_c0_g2_i6 from sample A1 / Example unspliced isoform:

TGTAGTTGTAATACTTTTATGTCGAAGAGAGGTTTTAGTTCATTGAGGTTTAGGTTGTGCTGATGGCTGAAGTCTGAATATTACCTAGAAAACCTAGAATTTTCAATTTCTCTCGGTTTCCGGCAGCTCCAAGATCGGTTTGGTTAATTTTGACGATTCAGTTCAGTTCGGTTGAGCCGAGTTGAGGGCCTGCCGCCGCT
GTTGCAGAGGATTGGATTCGTTTCAAATGCAAATGCAGCTTAGTTAAGAGTTGCCAGTTTCAATATTTGCTGAAAACATGCTGAAAGTTGTAAATCCTAAGACAAAGTCTGCAAAGAGGGCTCTTGAAAAGCGTGCTCCGAAGCTTGTTGAAAATGTAAAGAAAATGCTAATTTTGCATGGCACAAAGACTAGCAAGGTA
TTGAATACAGTCTTGACAGACATATTTCATCTCAAGAGAGCTGGGGGAAATGCTATCAAGTACACCAGAAAGAATGATAAGATCCGGCCATTTGAAAGTGGGGGTGAAACTACTTTGGAGTTCCTTTCTCTGAAGACTGATTGCAGTCTTTTTGCATTTGCCTCCCATTCGAAGAAGAGGCCAAACAATCTTGTTTTAGG
GAGAACATATGATCATCACATATATGATCTGATTGAGGTTGGTGTGGAAAATTTCAGTTCAATGGAGTCTTTTGGTTATGGCAAGAAATTATCCCCACAAGTAGGCTCAAAGCCCTTTTTTGCCTTCATTGGGGAAGGTTTTGAGACCAAGGAGCAACTTAAACATCTGAAAGAGGTTTTGCTTGATATGTTCAGGGGGG
AGgtacgattctcctttcctcagttatttcttagaatattaatgttgtaattgactgttctgttataataattttattgatggaaatacgatgataaatattttcttgtaagtattacacacataaatacaataacgcatggctggtcagGTTGTGGAAACAATAAATCTTGCGGGTCTAGATCGCGTATTTGTATGTAC
AGCAGTGGGTGATGACAAGGTTCGTTTCATGCATTGTGCAATACGTCTGAAAAAATCGGGCACAATGGTTCCACGTATTGAACTAGTTGAAATTGGACCTTCAATGGACCTTGTAAACAGACGCCATCGACTTCCAAATGAGGATGTTAGAAAAGATGCCATGAAATCTTCTGATGTGAAACCCAGAAAGAAGGTGAAGA
ATGTTGGTAAGGACCTTATATCTGGAAAAGTTGGAAAGATTTATGTTCCCAAGCAAGAGGTAGGAGATATGGCACTAGCTAAAATGAAAGGTTTGAAGAGGGAGCGCAGAGAAGCCGCAGCTGCCCATGCAGAAAATAAGACTACCATAAACAAGAAGCAGAAGACAGGCTAGAAAATATCTGTCACAATTTTGGTAAAC
GGGGAACAATATTTCACTCTTCTTCAGTAGGCAGGGCTCCTCTAGTTTCACCATTTGTTTTAACCTGCAGTACTGGCTCTTGCCTGCTAGTTGTAGTTTCAATTTTTATATATTCTCATTGAGGTGGAATATACCATTAGGAGAATGGGTAGAATAGTGACCGTGTTTAATGCTTTTCCTTCTCTATGTAATGTTTTAAC
TTCTTTTATTTGCTTCATGCAATTATTGAGTCAGCAATTTCAAGATTTGCTCTGAATGCTCTTATTTTGGTTACCCACACTGCTGCTCTGATCTGTTAGCAATTAATATTAGAGCAAGTGCTTCAGGCCTCTTGATATTTGAGTGTTAGGATATATGTGGTCATTTTTTTATTCTCTCTAAATAAATTGAGATAACTTTC
ATTAATACTAAAGTGTTACAAAATGTGTAAGGCTATTCTACAATGGAAAAAGGGCCCGCAAAGGTGAGCCGTTAACTATAGTTATCAGCCTATTGGACTCTATTAACTATAGAATATCATGACAGAAGATGTCATCAAAAGCGATAGTGGTGCTATAAAAACCTTTCACATACCCTCTTTTTCCAGAGAGATAAAGACAA
AAATATAAAGTCCTTACCATCAATACATCATAAGCAAGGGCATAGCCACTCCACGACAACCCATCCATCCATACGGCTAAACAGGGTTTCTTTGCAAATCTCTGTG