sp|Q8VZ20|ASR3_ARATH ----> Trihelix transcription factor ASR3
Intron 1 GTAACCATTA ... GCATGTAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 42.86 | 4 | 2 | 4 |
| A2 | 50 | 2 | 4 | 0 |
| A3 | 45.45 | 3 | 1 | 4 |
| A4 | 50 | 1 | 1 | 1 |
| A5 | 33.33 | 2 | 2 | 0 |
| A6 | 33.33 | 6 | 3 | 3 |
| A7 | 23.81 | 8 | 3 | 2 |
| A8 | 22.22 | 7 | 2 | 2 |
| A9 | 21.43 | 11 | 1 | 5 |
| A10 | 21.21 | 13 | 3 | 4 |
>TRINITY_DN26747_c0_g1_i2 from sample A6 / Example spliced isoformCTTCAATGGAAACACTCGCTTATTCACTCCATGAATCGATAGACGAGGACGAGCAGGCAAAGGCAGAGGTTCAAGAGGAAGAGGGGCACACATTATCATCAGTTGAGGAAGCTGAGACGCCATTGCAAAATATTCCACAATTGATAACTTCTCAAAGCACACGTTCCCATGTAACTCCAAGGTGGACTCTCAATGAGATG
CTTGTTCTTGTAAGAGAAAAATGGGCTGCAGAAAATGAAATTTTGTGTTCCACTTGTATACAAAGCAATCGGGGTTCAGACAAGTGGCATAATGTATCTAACCGATGCAAAACTTCACAAATATCGAGAACAGCAAGTCAATGCAGGAAAAAATGGGAATCACTTTTTTCCAACTATAAGAAGATAAAGGACTGGGATTT
TCACCGTCATACACAACCATATAGGAATACGAGTCCTAATGCTAAGAAACAACATAAACTTCCATTTTACATGGAGCAAGAGTTGTTTGATGCCATGGATGCACACCTAGGTAAAAGGCCAACCAGATCTCTTGAACCTATGTTTGATAATATGAATGTTGGAGCAGACGATTTTTTCACTTCCGAAGATGACTTGCAAG
ATGACATGTTTGAGATGCAATATCTGGCTCTTTCAGGGAGTAGTCCTGAACCACTGGATTCTACTGGACGGAAGAAAAGAGGAAGATCTCCTGCTACCGAGGATGACATAGAGCATGGAATCGCTACAGCAATTCGTCAAAATTCAAAGGGTATACAGGCTATTTTGCTGGAAGCAACCCAAGCTCGTATTCGTTCTAGC
CAGCTAGAAAGAGAAATCTATTGGAGGGGTGTGAAGATGAATAGAGAACTAGAACTACAGATTCCTGAGTTTGACAGAGAGCTTAGGAGGAAGCAGAGTGAGGATTTGGTAGAGGTTCTTGGAGAGCTTGTGAGTGCCCTTAATCATCTAGTGAATGCAATGCAGACTAACAGACCTCAACAAGTAAATACACAATGAAG
AGGCCTTGCTGTGGTAACAAACCAAATCGGATTTGATCTCTTAGCGGTTCACACTAAATAATCTTCAAATGATGTAGCCTGTGTGATATCCTTAAGGCTTAAAACACCATCTTGTGTCCAACAAAATATTTAAGAACAAGCGGTAATGGGTTTTCTAGAGGCATGCTCATGTAGAATATTGTACAGAGACATACATTTCG
ATATCATTAGCGTTTAGTATTTACCATCACCCAAAAACAGTTTATCAATTGTATGTAATAACATTTAATCAAATTATGGGTCACCTTGAGCGTGTAATCATATGCTATTGTACTCCAGAGTATCCTAACATACGATCATATATATATTTTTCCTGCTTTACTCATTACCTATGCAAACCCTGCCTAAGTCGGCAAAATTA
C
>TRINITY_DN26747_c0_g1_i1 from sample A6 / Example unspliced isoform:CTTCAATGGAAACACTCGCTTATTCACTCCATGAATCGATAGACGAGGACGAGCAGGCAAAGGCAGAGGTTCAAGAGGAAGAGGGGCACACATTATCATCAGTTGAGGAAGCTGAGACGCCATTGCAAAATATTCCACAATTGATAACTTCTCAAAGCACACGTTCCCATGTAACTCCAAGGTGGACTCTCAATGAGATG
CTTGTTCTTGTAAGAGAAAAATGGGCTGCAGAAAATGAAATTTTGTGTTCCACTTGTATACAAAGCAATCGGGGTTCAGACAAGTGGCATAATGTATCTAACCGATGCAAAACTTCACAAATATCGAGAACAGCAAGTCAATGCAGGAAAAAATGGGAATCACTTTTTTCCAACTATAAGAAGATAAAGGACTGGGATTT
TCACCGTCATACACAACCATATAGGAATACGAGTCCTAATGCTAAGAAACAACATAAACTTCCATTTTACATGGAGCAAGAGTTGTTTGATGCCATGGATGCACACCTAGGTAAAAGGCCAACCAGATCTCTTGAACCTATGTTTGATAATATGAATGTTGGAGCAGACGATTTTTTCACTTCCGAAGATGACTTGCAAG
ATGACATGTTTGAGATGCAATATCTGGCTCTTTCAGgtaaccattagtttctgtatattgtttttctctccttaaaagtttacttttaaaggttattgctgagctctgtttatttcccattctctgcatgtaaagGGAGTAGTCCTGAACCACTGGATTCTACTGGACGGAAGAAAAGAGGAAGATCTCCTGCTACCGAG
GATGACATAGAGCATGGAATCGCTACAGCAATTCGTCAAAATTCAAAGGGTATACAGGCTATTTTGCTGGAAGCAACCCAAGCTCGTATTCGTTCTAGCCAGCTAGAAAGAGAAATCTATTGGAGGGGTGTGAAGATGAATAGAGAACTAGAACTACAGATTCCTGAGTTTGACAGAGAGCTTAGGAGGAAGCAGAGTGA
GGATTTGGTAGAGGTTCTTGGAGAGCTTGTGAGTGCCCTTAATCATCTAGTGAATGCAATGCAGACTAACAGACCTCAACAAGTAAATACACAATGAAGAGGCCTTGCTGTGGTAACAAACCAAATCGGATTTGATCTCTTAGCGGTTCACACTAAATAATCTTCAAATGATGTAGCCTGTGTGATATCCTTAAGGCTTA
AAACACCATCTTGTGTCCAACAAAATATTTAAGAACAAGCGGTAATGGGTTTTCTAGAGGCATGCTCATGTAGAATATTGTACAGAGACATACATTTCGATATCATTAGCGTTTAGTATTTACCATCACCCAAAAACAGTTTATCAATTGTATGTAATAACATTTAATCAAATTATGGGTCACCTTGAGCGTGTAATCAT
ATGCTATTGTACTCCAGAGTATCCTAACATACGATCATATATATATTTTTCCTGCTTTACTCATTACCTATGCAAACCCTGCCTAAGTCGGCAAAATTAC
Intron 2 GTTATTGCTG ... GCATGTAAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 33.33 | 4 | 1 | 3 |
| A2 | 33.33 | 2 | 2 | 0 |
| A3 | 33.33 | 3 | 0 | 3 |
| A4 | 0 | 1 | 0 | 0 |
| A5 | 0 | 2 | 0 | 0 |
| A6 | 25 | 6 | 2 | 2 |
| A7 | 15.79 | 8 | 1 | 2 |
| A8 | 22.22 | 7 | 2 | 2 |
| A9 | 21.43 | 11 | 1 | 5 |
| A10 | 16.13 | 13 | 2 | 3 |
>TRINITY_DN26733_c0_g2_i2 from sample A8 / Example spliced isoformGCCTTGCTCACTTCAATGGAAACACTCGCTTATTCACTCCATGAATCGATAGACGAGGACGAGCAGGCAAAGGCAGAGGTTCAAGAGGAAGAGGGGCACACATTATCATCAGTTGAGGAAGCTGAGACGCCATTGCAAAATATTCCACAATTGATAACTTCTCAAAGCACACGTTCCCATGTAACTCCAAGGTGGACTCT
CAATGAGATGCTTGTTCTTGTAAGAGAAAAATGGGCTGCAGAAAATGAAATTTTGTGTTCCACTTGTATACAAAGCAATCGGGGTTCAGACAAGTGGCATAATGTATCTAACCGATGCAAAACTTCACAAATATCGAGAACAGCAAGTCAATGCAGGAAAAAATGGGAATCACTTTTTTCCAACTATAAGAAGATAAAGG
ACTGGGATTTTCACCGTCATACACAACCATATAGGAATACGAGTCCTAATGCTAAGAAACAACATAAACTTCCATTTTACATGGAGCAAGAGTTGTTTGATGCCATGGATGCACACCTAGGTAAAAGGCCAACCAGATCTCTTGAACCTATGTTTGATAATATGAATGTTGGAGCAGACGATTTTTTCACTTCCGAAGAT
GACTTGCAAGATGACATGTTTGAGATGCAATATCTGGCTCTTTCAGGGAGTAGTCCTGAACCACTGGATTCTACTGGACGGAAGAAAAGAGGAAGATCTCCTGCTACCGAGGATGACATAGAGCATGGAATCGCTACAGCAATTCGTCAAAATTCAAAGGGTATACAGGCTATTTTGCTGGAAGCAACCCAAGCTCGTAT
TCGTTCTAGCCAGCTAGAAAGAGAAATCTATTGGAGGGGTGTGAAGATGAATAGAGAACTAGAACTACAGATTCCTGAGTTTGACAGAGAGCTTAGGAGGAAGCAGAGTGAGGATTTGGTAGAGGTTCTTGGAGAGCTTGTGAGTGCCCTTAATCATCTAGTGAATGCAATGCAGACTAACAGACCTCAACAAGTAAATA
CACAATGAAGAGGCCTTGCTGTGGTAACAAACCAAATCGGATTTGATCTCTTAGCGGTTCACACTAAATAATCTTCAAATGATGTAGCCTGTGTGATATCCTTAAGGCTTAAAACACCATCTTGTGTCCAACAAAATATTTAAGAACAAGCGGTAATGGGTTTTCTAGAGGCATGCTCATGTAGAATATTGTACAGAGAC
ATACATTTCGATATCATTAGCGTTTAGTATTTACCATCACCCAAAAACAGTTTATCAATTGTATGTAATAACATTTAATCAAATTATGGGTCACCTTGAGCGTGTAATCATATGCTATTGTACTCCAGAGTATCCTAACATACGATCATATATATATTTTTCCTGCTTTACTCATTACCTATGCAAACCCTGCCTAAGTC
GGCAAAATTTCATCTTATTTGCCCCTGTTTTACTTGTTGGGTAATTTTTTGAGTTTGCTCGCATGGCATATGCGAGCCTCACTATCATGTTCCAGCACGGGACAGCTTGTGAGAATCAATTATTTCTCCCATTGAAAAAATAGAGAATAAATTAC
>TRINITY_DN26733_c0_g2_i1 from sample A8 / Example unspliced isoform:GCCTTGCTCACTTCAATGGAAACACTCGCTTATTCACTCCATGAATCGATAGACGAGGACGAGCAGGCAAAGGCAGAGGTTCAAGAGGAAGAGGGGCACACATTATCATCAGTTGAGGAAGCTGAGACGCCATTGCAAAATATTCCACAATTGATAACTTCTCAAAGCACACGTTCCCATGTAACTCCAAGGTGGACTCT
CAATGAGATGCTTGTTCTTGTAAGAGAAAAATGGGCTGCAGAAAATGAAATTTTGTGTTCCACTTGTATACAAAGCAATCGGGGTTCAGACAAGTGGCATAATGTATCTAACCGATGCAAAACTTCACAAATATCGAGAACAGCAAGTCAATGCAGGAAAAAATGGGAATCACTTTTTTCCAACTATAAGAAGATAAAGG
ACTGGGATTTTCACCGTCATACACAACCATATAGGAATACGAGTCCTAATGCTAAGAAACAACATAAACTTCCATTTTACATGGAGCAAGAGTTGTTTGATGCCATGGATGCACACCTAGGTAAAAGGCCAACCAGATCTCTTGAACCTATGTTTGATAATATGAATGTTGGAGCAGACGATTTTTTCACTTCCGAAGAT
GACTTGCAAGATGACATGTTTGAGATGCAATATCTGGCTCTTTCAGgttattgctgtgctctgtttatttcccattctctgcatgtaaagGGAGTAGTCCTGAACCACTGGATTCTACTGGACGGAAGAAAAGAGGAAGATCTCCTGCTACCGAGGATGACATAGAGCATGGAATCGCTACAGCAATTCGTCAAAATTCA
AAGGGTATACAGGCTATTTTGCTGGAAGCAACCCAAGCTCGTATTCGTTCTAGCCAGCTAGAAAGAGAAATCTATTGGAGGGGTGTGAAGATGAATAGAGAACTAGAACTACAGATTCCTGAGTTTGACAGAGAGCTTAGGAGGAAGCAGAGTGAGGATTTGGTAGAGGTTCTTGGAGAGCTTGTGAGTGCCCTTAATCA
TCTAGTGAATGCAATGCAGACTAACAGACCTCAACAAGTAAATACACAATGAAGAGGCCTTGCTGTGGTAACAAACCAAATCGGATTTGATCTCTTAGCGGTTCACACTAAATAATCTTCAAATGATGTAGCCTGTGTGATATCCTTAAGGCTTAAAACACCATCTTGTGTCCAACAAAATATTTAAGAACAAGCGGTAA
TGGGTTTTCTAGAGGCATGCTCATGTAGAATATTGTACAGAGACATACATTTCGATATCATTAGCGTTTAGTATTTACCATCACCCAAAAACAGTTTATCAATTGTATGTAATAACATTTAATCAAATTATGGGTCACCTTGAGCGTGTAATCATATGCTATTGTACTCCAGAGTATCCTAACATACGATCATATATATA
TTTTTCCTGCTTTACTCATTACCTATGCAAACCCTGCCTAAGTCGGCAAAATTTCATCTTATTTGCCCCTGTTTTACTTGTTGGGTAATTTTTTGAGTTTGCTCGCATGGCATATGCGAGCCTCACTATCATGTTCCAGCACGGGACAGCTTGTGAGAATCAATTATTTCTCCCATTGAAAAAATAGAGAATAAATTAC