sp|Q94BR5|CHR28_ARATH ----> Helicase-like transcription factor CHR28
Intron 1 GCATCCAAGG ... CTGTCGCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 54.88 | 37 | 51 | 39 |
| A2 | 68.75 | 10 | 22 | 22 |
| A3 | 53.74 | 34 | 42 | 37 |
| A4 | 61.54 | 15 | 25 | 23 |
| A5 | 43.9 | 23 | 22 | 14 |
| A6 | 100 | 0 | 2 | 2 |
| A7 | 68 | 8 | 18 | 16 |
| A8 | 75 | 2 | 5 | 7 |
| A9 | 47.62 | 11 | 9 | 11 |
| A10 | 49.4 | 21 | 25 | 16 |
>TRINITY_DN43779_c0_g1_i3 from sample A7 / Example spliced isoformCCCTAATTTCCCTCGTTGGTCAACATGGTATTCTCCATGCACACAAAAACCATGTGGATCCGATACAGATTTGGCTGTTCATTGAACAAGTAAAGCGTAAAGGTATGAAAGCGGGGTGGAAAAAGTAAACGCCAAAACAAAAACAAAAAGTGATGAGGATGGATAGCAATTCTCCTCCGTCCCTGTTCCTTTTTTTCTAT
TTTCCAAAGACTAGCAGGAGGATAGAGGGTTTGTAAGATCAGTTCGCCCTTCCAAATAGCGGACAATATTTTCGATTGCGTGGTTTAAATTCGGATAGAGGGTTTGTAAGATCAGTTCGCCCTTCCAAATAGCGGACAATATTTTCGATTGCGTGGTTTAAATTCGGATTTTGGGGTTCAGCTCGCATATGTAGGGTCCG
ATGATTTAACGAGTTGAATGAAATGTGTGGCCAATTTTGGCGGGAGGGGACGGATTTAGGTGCGGCCTGTGCATATACACTGAATTTCTCGTGGAGATGGGCGATGAAGGATCTCTGATGGACTTTGACATGGACGTCGACGACTTCTTTCAAATCTTGTCAGAACCCCCAGCTCCCCCTAGTCAAGTAAAAGCTCCACA
AGAGGAAAGCAACGGCGAACAGCAGCTAAACATTGGCACGCCTCCAATGGGTTCAGACTCATCCAACTTCCATCTCCAGTATGATCCCTATCTGGATAAAGAGCATGATATCTTCTTATCAGATGCGCTAAATCCAAATTCATGTGAGAGCTTACAATCAGAACAACTACGTGGAACCACCCCAAGTTCATCATCAGATA
TTTTTCAGGATTTGGAAAGTGTGTCAGGCCTTGATGAGCTGGGAACTATGTATCCTGTTGATTCTGAAAGGCCCCAACAGAAAGATGGCTCGGTTTTGGCATCTGACTGGCTGCCCGCAGCAAACTCGGGAAATAATACTGTCACATATATTTCCACTATGAATTCGTTGGATGCTGAGAGAAACAGTAGAAAGTTTGGT
TTTATTGATGAAAATCTTCCACTACTAGATTTGAAATCAAGTGCAAGCAATGTCAATGAGTCTATTTCAGGAAGGAGTTTACAGGATTCAGCTGCAAGGGAGTTGGTAGACCTCACTCAGACAGACAGCAGTGATGAAGATATAGAAATAACCATTAGCCAATTTGGACATGCTTCTAAACTTGATAGTGTGAATGCTGA
TGTTCGTAGAAAACTTCCTGCCTGGGGTAAACCATCAAATAAAAATGTTGTAAAGAAAGGTTCATTGAAGATACCACAGAAGAACTCCAACCTTAAAGACATTTCGGATTGGAATTCTGGAAAAATGCCCACCAATGCCGAAGAAACAGGAATAGTTGGGTTGCGATTGCAGGGAGCCTCTGGAACTGCATTGGGAGGAA
AATTTACAGAAAGGAAGCAAAATACAGGGAATCCTTACCAGCATGCAGAATTTAGTGTCGAACAGAAACCACAGGTCAAGGAGGAGTGGATGGGTCGAAGTTTTGAACCGAAACTACAAGCCAGGGAGGAGTGGCCTTTTGGGAGTTTTGAACAGAAAGCACAAATCAAGGAGGAGTGGAGCAGTGGGAGTTTTGATCCG
AAAGCACAAATCAAGGAGGAATGGAGTGCTGGGGGTTTTCCTTTTAACTGGAAATCTGATTCTATAAATATTGAAGATGAAGTGATTGAAAAACCTAACCTGAAGGATATCACATACTGGAATGGTGATTCAGATACAGAAGATAAGCCTGATTACAGCAATACAGGAAGGCACTTGCCTTCTACTTTAGGTTGTGCAAG
ATCCTTAAATACAGTTGGTTCACACGTGCCACCCTGGACAAAGTCAGAGGATGAATCATTGACATTCAGAGCAGTATTGCAGTACCAGGATCTGCCAACAGTGGAATCTACCCCTGATGATGGTCTTTTGGCGGTATCTTTGCTTAAGCACCAGAGGATTGCATTGGCTTGGATGGTTCTACAGGAGACAAACAGCAT
>TRINITY_DN43779_c0_g1_i4 from sample A7 / Example unspliced isoform:CCCTAATTTCCCTCGTTGGTCAACATGGTATTCTCCATGCACACAAAAACCATGTGGATCCGATACAGATTTGGCTGTTCATTGAACAAGTAAAGCGTAAAGGTATGAAAGCGGGGTGGAAAAAGTAAACGCCAAAACAAAAACAAAAAGTGATGAGGATGGATAGCAATTCTCCTCCGTCCCTGTTCCTTTTTTTCTAT
TTTCCAAAGACTAGCAGGAGGATAGAGGGTTTGTAAGATCAGTTCGCCCTTCCAAATAGCGGACAATATTTTCGATTGCGTGGTTTAAATTCGGATAGAGGGTTTGTAAGATCAGTTCGCCCTTCCAAATAGCGGACAATATTTTCGATTGCGTGGTTTAAATTCGGATTTTGGGGTTCAGCTCGCATACATAGGGTCCG
ATGATTTAACGAGTTGAATGAAATGTGTGGCCAATTTTGGCGGGAGGGGACGGATTTAGGTGCGGCCTGTGCATATACACTGAATTTCTCGTGGAGATGGGCGATGAAGGATCTCTGATGGACTTTGACATGGACGTCGACGACTTCTTTCAAATCTTGTCAGAACCCCCAGCTCCCCCTCAAAATAGGACTATGCTTAG
GGTTTTACGCGATATATCGGAACATCGAAAGGCATCGCAGACATGAGTCAAGTAAAAGCTCCACAAGAGGAAAGCAACGGCGAACAGCAGCTAAACATTGGCACGCCTCCAATGGGTTCAGACTCATCCAACTTCCATCTCCAGTATGATCCCTATCTGGATAAAGAGCATGgcatccaagggactgatcagattcttct
gtcgccagATATCTTCTTATCAGATGCGCTAAATCCAAATTCATGTGAGAGCTTACAATCAGAACAACTACGTGGAACCACCCCAAGTTCATCATCAGATATTTTTCAGGATTTGGAAAGTGTGTCAGGCCTTGATGAGCTGGGAACTATGTATCCTGTTGATTCTGAAAGGCCCCAACAGAAAGATGGCTCGGTTTTGG
CATCTGACTGGCTGCCCGCAGCAAACTCGGGAAATAATACTGTCACATATATTTCCACTATGAATTCGTTGGATGCTGAGAGAAACAGTAGAAAGTTTGGTTTTATTGATGAAAATCTTCCACTACTAGATTTGAAATCAAGTGCAAGCAATGTCAATGAGTCTATTTCAGGAAGGAGTTTACAGGATTCAGCTGCAAGG
GAGTTGGTAGACCTCACTCAGACAGACAGCAGTGATGAAGATATAGAAATAACCATTAGCCAATTTGGACATGCTTCTAAACTTGATAGTGTGAATGCTGATGTTCGTAGAAAACTTCCTGCCTGGGGTAAACCATCAAATAAAAATGTTGTAAAGAAAGGTTCATTGAAGATACCACAGAAGAACTCCAACCTTAAAGA
CATTTCGGATTGGAATTCTGGAAAAATGCCCACCAATGCCGAAGAAACAGGAATAGTTGGGTTGCGATTGCAGGGAGCCTCTGGAACTGCATTGGGAGGAAAATTTACAGAAAGGAAGCAAAATACAGGGAATCCTTACCAGCATGCAGAATTTAGTGTCGAACAGAAACCACAGGTCAAGGAGGAGTGGATGGGTCGAA
GTTTTGAACCGAAACTACAAGCCAGGGAGGAGTGGCCTTTTGGGAGTTTTGAACAGAAAGCACAAATCAAGGAGGAGTGGAGCAGTGGGAGTTTTGATCCGAAAGCACAAATCAAGGAGGAATGGAGTGCTGGGGGTTTTCCTTTTAACTGGAAATCTGATTCTATAAATATTGAAGATGAAGTGATTGAAAAACCTAAC
CTGAAGGATATCACATACTGGAATGGTGATTCAGATACAGAAGATAAGCCTGATTACAGCAATACAGGAAGGCACTTGCCTTCTACTTTAGGTTGTGCAAGATCCTTAAATACAGTTGGTTCACACGTGCCACCCTGGACAAAGTCAGAGGATGAATCATTGACATTCAGAGCAGTATTGCAGTACCAGGATCTGCCAAC
AGTGGAATCTACCCCTGATGATGGTCTTTTGGCGGTATCTTTGCTTAAGCACCAGAGGATTGCATTGGCTTGGATGGTTCTACAGGAGACAAACAGCAT