NA ----> NA
Intron 1 GTGAGTTCAA ... ATTTTTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 91.59 | 9 | 98 | 26 |
| A2 | 84.62 | 12 | 66 | 26 |
| A3 | 78.48 | 17 | 62 | 26 |
| A4 | 75 | 21 | 63 | 10 |
| A5 | 80 | 11 | 44 | 9 |
| A6 | 32.81 | 86 | 42 | 0 |
| A7 | 37.99 | 111 | 68 | 4 |
| A8 | 35.26 | 112 | 61 | 3 |
| A9 | 38.61 | 97 | 61 | 8 |
| A10 | 32.3 | 109 | 52 | 14 |
>TRINITY_DN41465_c0_g3_i2 from sample A9 / Example spliced isoformTCAATCCTTCATTTGGCTGGGAGGAGAGGAGAGCAAGTTCATTCCTTCATTTGGCCGGGAGAAGGAGAAGGAGAGGAGAGCGTAGCTAGCAGAGTGGAGGTTTTGTCCCTGCGTTTTATTTATTTATTTATTTTGTGTTGTTTTTTATAAGCATGGCCATGCTTTACCTGCGTTTTTCTTTTGTTTTGTGTTTTTTCTTC
TTCCATGTCGTTTCTTCGTTTTAGGCTCTGTTTTTTTTCTTCGTTTTAGTCTCTGTGTTTTTCTTTCATGCTCTGCGTTTTTCTTCGTTTTAGTCTCTGTGTTTTTCTTGGTCTGTTTACTGGATTGAGGGTTTAATCAATGAGAAGGGGGGGTTCAATCAATGGAGGGCGATGGCAGAGGAAGACGTATCTAGGGTTTT
GCAAGGTGGGGCATGCAGATAAGGAGGCGCAGATGCAGAGATAGCCAGCGGATAAAAAAAGGCAAAGAACCCCTGTTGTTGGTAGGGCAGAACAGTTAGTAAGAGCAACAAAAAAGGCAAAGAATCCGTTCTGCATGTGGTGTGTTTTGCAGGTATATTTGCAAATCAAAATCACTAAAGTAGATGCAAGCAGATGATGC
TGAGGTACGCCATA
>TRINITY_DN41465_c0_g3_i1 from sample A9 / Example unspliced isoform:TCAATCCTTCATTTGGCTGGGAGGAGAGGAGAGCAAGTTCATTCCTTCATTTGGCCGGGAGAAGGAGAAGGAGAGGGAGAGGAGAGCGTAGCTAGCAGAGTGGAGGTTTTGTCCCTGCGTTTTTTATTTTATTTTATTTTGTGTATTTTGATCTGGGTGTTGTTTTTTATAAGCATGGCCATGCTTTACCTGCGTTTTTC
TTTTGTTTTGTGTTTTTTCTTCTTCCATGTCGTTTCTTCGTTTTAGGCTCTGTTTTTTTTCCTTTTAGGCTCTACTTTTCTTCGTTTTAGTCTCTGTGTTTTTCTTTCATGCTCTGCGTTTTTCTTCGTTTTAGTCTCTGTGTTTTTCTTGGTCTGTTTACTGGATTGAGGGTTTAATCAATGGAGGGCGATGGCAGAGG
AAGACGTATCTAGGGTTTTGCAAGGTGGGGCATGCAGATAAGGAGGCGCAGATGCAGAGgtgagttcaagatcgaatcgaatccttctctctttcaaatattaatttgtctgaattgttgactgacaggcaaaacccgtagaggtatgcacagggattttcctagattagtaggtctagccaaccatttccctggtatgc
taaaaaaatttccctagatttgcaggtggcaacttgtgattagctgccggagagcttttgagatgcccgatttctttttggatatttccttctaaatcgcctgattccatagatagcctctcctccgttgcaagcacattttatatcaaaaagaaattgccatttaaaactaatggcgctggcgcctactttaatggagt
gtcaaaatagctaggttttcaaactgttaaggtttttatcttctgccaattcattctcaagtctatggagtgcatttttgtagATAGCCAGCGGATAAAAAAAGGCAAAGAACCCCTGTTGTTGGTAGGGCAGAACAGTTAGTAAGAGCAACAAAAAAGGCAAAGAATCCGTTCTGCATGTGGGTAAGGAACCCGCACCC
TGCAAGTTTATCACTCAGAGCCCGTGGATAACAATGATATGTAG