sp|O22268|DIM1A_ARATH ----> Ribosomal RNA small subunit methyltransferase
Intron 1 GTGAGTTCCA ... CCCTTTCCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 36.36 | 7 | 2 | 4 |
| A2 | 60 | 4 | 1 | 6 |
| A3 | 25 | 18 | 0 | 6 |
| A4 | 23.53 | 13 | 2 | 4 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 17.24 | 24 | 2 | 5 |
| A7 | 20.27 | 59 | 2 | 15 |
| A8 | 28.21 | 28 | 0 | 11 |
| A9 | 20 | 40 | 0 | 10 |
| A10 | 13.89 | 31 | 0 | 5 |
>TRINITY_DN48324_c1_g2_i5 from sample A7 / Example spliced isoformCAAACCCGGCGGGGGGGTAGGGTTGCTCATTGGCCCGTTGTGACAAGACTTGAAGGGTAGGCGACCCCTGGGATAGAGGCTCTCCCCTGGGATAAAGGGTCTCGGGACGTCTCAGCCCCTGCTGAGTCACAAGTTTCTGGTATATTTGGCTTGCGGGCCAACCCATTCCATTTTCCTTGCGAGGATAACAGCTTTATCAT
GTGATGCCTTCGAAGAAACTTTGAGTTGCAGACCGCCTCGATTCATATAACAGGTGTCTGAGCAGAACCTTTGCCAAACTAACTGGAGGCGTATGACCGAGTAGCTGGGAAGCACGTCTCTGAATGCGAATGCATATCATTCATAAGACCGAACGAGAATGAGAAGAGGTTTTCCTTTCCTCTACATCACACTTCAATCA
CATTCTGCAAGACTTATAAGCTCCAGCGCGGTCATATGTAAAGCCCGTTATGCTGCTACCAAGCCCTCCTCCTACTTCAAACAGAGAAGCAGATCAAAACCCATCTCCTTTACAGAGCCGGAAGGGAAAGAAGAAGCGTCGAGGATAGAGCTTCGCAAGAGTCGGCAGCAACACATTCTCACAAATCACCGCGTTCTCAG
ATCCATTGTCGGCAAAGCCGGCGTGAGAGAAACCGACACCGTCCTGGAAATCGGCCCAGGCACCGGAAACCTAACCCTAGAGCTTCTGCAGGTCGCCCACAGAGTCATCGCAGTCGAGATTGATCCCCGGATGATCGAAGCAGTTCACCAACGCATACAGGGGACCGAAATGGCCCAGCGATTGGAGGCTATCTCACCCG
GCATCTGCTTAGGTTCTTGACGGAGCAAGGTGTAAGTCCTAAGCGAATTTGTGTGAATATTTATCCTCAACCTCTTATTTCTGTTGTAAGCCTGCTACAAATGCATTGTAATATTTCCATAGTGGAGAAAGGCACACCTGCTGTAGTTGTAAATATCATACACGACAACAATCTTGAAGTGGTTTATGAGGTATCTCACA
CATTAAAAGCTTTATCAAGCTTTGAGTTGAAGTTCTCAGTTGGTGGAAGGGGACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATGCAACCCTCAT
>TRINITY_DN48324_c1_g2_i4 from sample A7 / Example unspliced isoform:CGAAATGGCCCAGCGATTGGAGgtgagttccatagtcatgcccagttttatcattcattcaccttaattacaaaggaaatcttaggcattggtataattatcctgattgtgaaggtcttggttgctgtttatattcccaccaatgttcaaatcgcttagagatatgttccctttccagGCTATCTCACCCGGCATCTGCT
TAGGTTCTTGACGGAGCAAGGTGTAAGTCCTAAGCGAATTTGTGTGAATATTTATCCTCAACCTCTTATTTCTGTTGTAAGCCTGCTACAAATGCATTGTAATATTTCCATAGTGGAGAAAGGCACACCTGCTGTAGTTGTAAATATCATACACGACAACAATCTTGAAGTGGTTTATGAGGTATCTCACACATTAAAAG
CTTTATCAAGCTTTGAGTTGAAGTTCTCAGGTAGATATGATAACATACTCCTCTGGTACTAACTTCTTTTAAAAATGTCCGCAGAATTAATAAGAACCCTCTCTTATAATTGCTATATTTAGTGATGCTTTCTTAGTTGTCTTTTGCAATATTTTCTTAATTTTTTGTCATTGCTGTTTTGTGATGCTTCTTAGTTCCAA
TCTTACTAAAGATCAAAGTTGCGTTTCTCTCATATGATTCTCTTTTTGCTTCTGTTATGGATAGTTGGTGGAAGGGGACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATGCAACCCTCA
T
Intron 2 GTGAGTTCCA ... TTATGGATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 18.18 | 18 | 2 | 4 |
| A2 | 25.93 | 20 | 1 | 7 |
| A3 | 30.56 | 25 | 0 | 11 |
| A4 | 11.76 | 15 | 2 | 2 |
| A5 | 35.29 | 11 | 0 | 6 |
| A6 | 22.97 | 57 | 2 | 17 |
| A7 | 16.67 | 85 | 2 | 17 |
| A8 | 5.88 | 48 | 0 | 3 |
| A9 | 10.77 | 58 | 0 | 7 |
| A10 | 17.2 | 77 | 0 | 16 |
>TRINITY_DN48324_c1_g2_i7 from sample A7 / Example spliced isoformCAAACCCGGCGGGGGGGTAGGGTTGCTCATTGGCCCGTTGTGACAAGACTTGAAGGGTAGGCGACCCCTGGGATAGAGGCTCTCCCCTGGGATAAAGGGTCTCGGGACGTCTCAGCCCCTGCTGAGTCACAAGTTTCTGGTATATTTGGCTTGCGGGCCAACCCATTCCATTTTCCTTGCGAGGATAACAGCTTTATCAT
GTGATGCCTTCGAAGAAACTTTGAGTTGCAGACCGCCTCGATTCATATAACAGGTGTCTGAGCAGAACCTTTGCCAAACTAACTGGAGGCGTATGACCGAGTAGCTGGGAAGCACGTCTCTGAATGCGAATGCATATCATTCATAAGACCGAACGAGAATGAGAAGAGGTTTTCCTTTCCTCTACATCACACTTCAATCA
CATTCTGCAAGACTTATAAGCTCCAGCGCGGTCATATGTAAAGCCCGTTATGCTGCTACCAAGCCCTCCTCCTACTTCAAACAGAGAAGCAGATCAAAACCCATCTCCTTTACAGAGCCGGAAGGGAAAGAAGAAGCGTCGAGGATAGAGCTTCGCAAGAGTCGGCAGCAACACATTCTCACAAATCACCGCGTTCTCAG
ATCCATTGTCGGCAAAGCCGGCGTGAGAGAAACCGACACCGTCCTGGAAATCGGCCCAGGCACCGGAAACCTAACCCTAGAGCTTCTGCAGGTCGCCCACAGAGTCATCGCAGTCGAGATTGATCCCCGGATGATCGAAGCAGTTCACCAACGCATACAGGGGACCGAAATGGCCCAGCGATTGGAGTTGGTGGAAGGGG
ACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATGCAACCCTCATCATTCAGAAGGAATTCGGCCGCCTCCTTGTGGCAAAGCCCAGTGATTCCCTCTTCAGTCTCCTGGCTGTAAATGTG
GGTCTTCTGGCCAGAGTCAAGCTCCTTATGGATGTAAGCAAGAAGGATTTTATGCCGCGCCCTCGAGTGAATTCTTCCGTTGTGAGAATCGAATCCAGGGTCTGGCCTCCTCCAGTGGACTTGAGCGAGTGGAATGGATTCACTCGGATGTGTTTCGCCAGTAAGGATAAGACTCTCGGTGCGATCTTCAGGCAGAAAAA
GAATGTTTTCAGTCTTATGAAGAGGACAGAGTTGTGGCATGAGAAGCAGAAATTAGAGGGTAGCCATGGTAATCTGGAAAAAAACCTATCAGATTTATCCTTATTAGGTGAGCTGGATGAGGAAACAACTGATACAGAAGATATAGATGTAGATAGTGATGCAGATAACGAAAAGTTTGTATGTTTCAAAGAGAATATTG
TCAACATTCTCAAAGCAGGTGGATATGAAGAGAAGAGCTCATCTAAACTCTATGTGGAGGAATACTTGAGACTTATTTCTTTGTTTAACAACAAAGGTATACGCTTCTCATAAATCTTTACATTCTCTTGAAGCGGGACTATTCGAATGGTAAGATGTTCCATAAGTTATCAAATCCCCAAGTCTGTCTCCCTATTTTTC
GTTTACATATTTGCGCATTTTGCAGTTTTAAACCGTATGCAGAATGCCATAAATGATAAAAGTAGGCAGGACCTGGCCAGATATATTATGTTCCCTTTGCTGTGACAGGGCACTCTTTGAATTGACTGCATATATTTCTTACTGACATACTTGATTGATCAACAACCGTGATATGTAATACCTTATTTCCACTGAGGTAG
GGAGAAATCAATGAGCGAGTCTGCTTGGAGCAGCCAAAGCTATAACAATGCAAATCCTCAATTTACTACGTTGTGAAGTTGACCTGCCTTCTCCACGAGCCCAATACAGAGTCAGGCACTTATGGCTGTCAAGGAGAGCAAATAGTTCATAGTTCAGGGTTTGAATCCAAGCAAGGCAATGCATATGTTTCTTCGGTCAT
TTAAATTTTGTTACTTACTAAATAATCTAAGAGACAAGTTTACTACTCTGAAATTAGTCAAATAGCATTGCAGTATGAGACTTCAGGACTCGAGGCACACAGCTTAAGTGTTATTTCTAGGTCAAAATGGTTTTCCTATCCATTCATAGTATTCAGATCTGAACCTGGTTTCGATGTAGTTTTCGAATTCGAACCTGGTT
ATTATGGTTCTCATAGCGATTCCTAGAGTGCCTTACTTTATTATTTTCTCATTTTGTATTCCTGCCTAGATTGATTACAGTTACTGTTTAAAGAAAGGTGGCAGACATCATGTCTAGATGTTTGTTCGCTTGTAACTTTTAACTGTTCATCAAGTTTAATCTTGAAGATCTATATCCCTGCCATTTTTTATTTGCTCCCA
TGGTTATCTTCTTTAAATGCATTCTGCAACAAACAGTGAAGGTATATTTCCATTGGACAATGTTGCAAGAGTAAATAG
>TRINITY_DN48324_c1_g2_i4 from sample A7 / Example unspliced isoform:CGAAATGGCCCAGCGATTGGAGgtgagttccatagtcatgcccagttttatcattcattcaccttaattacaaaggaaatcttaggcattggtataattatcctgattgtgaaggtcttggttgctgtttatattcccaccaatgttcaaatcgcttagagatatgttccctttccaggctatctcacccggcatctgct
taggttcttgacggagcaaggtgtaagtcctaagcgaatttgtgtgaatatttatcctcaacctcttatttctgttgtaagcctgctacaaatgcattgtaatatttccatagtggagaaaggcacacctgctgtagttgtaaatatcatacacgacaacaatcttgaagtggtttatgaggtatctcacacattaaaag
ctttatcaagctttgagttgaagttctcaggtagatatgataacatactcctctggtactaacttcttttaaaaatgtccgcagaattaataagaaccctctcttataattgctatatttagtgatgctttcttagttgtcttttgcaatattttcttaattttttgtcattgctgttttgtgatgcttcttagttccaa
tcttactaaagatcaaagttgcgtttctctcatatgattctctttttgcttctgttatggatagTTGGTGGAAGGGGACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATGCAACCCTCA
T
Intron 3 GTAAGATGTT ... GCTGTGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 60.38 | 21 | 31 | 33 |
| A2 | 68.29 | 13 | 32 | 24 |
| A3 | 61.76 | 13 | 30 | 12 |
| A4 | 65.52 | 10 | 11 | 27 |
| A5 | 80 | 2 | 6 | 10 |
| A6 | 64.13 | 33 | 71 | 47 |
| A7 | 64.85 | 42 | 70 | 85 |
| A8 | 62.28 | 43 | 82 | 60 |
| A9 | 68.21 | 24 | 49 | 54 |
| A10 | 64 | 18 | 45 | 19 |
>TRINITY_DN48324_c1_g2_i6 from sample A7 / Example spliced isoformCAAACCCGGCGGGGGGGTAGGGTTGCTCATTGGCCCGTTGTGACAAGACTTGAAGGGTAGGCGACCCCTGGGATAGAGGCTCTCCCCTGGGATAAAGGGTCTCGGGACGTCTCAGCCCCTGCTGAGTCACAAGTTTCTGGTATATTTGGCTTGCGGGCCAACCCATTCCATTTTCCTTGCGAGGATAACAGCTTTATCAT
GTGATGCCTTCGAAGAAACTTTGAGTTGCAGACCGCCTCGATTCATATAACAGGTGTCTGAGCAGAACCTTTGCCAAACTAACTGGAGGCGTATGACCGAGTAGCTGGGAAGCACGTCTCTGAATGCGAATGCATATCATTCATAAGACCGAACGAGAATGAGAAGAGGTTTTCCTTTCCTCTACATCACACTTCAATCA
CATTCTGCAAGACTTATAAGCTCCAGCGCGGTCATATGTAAAGCCCGTTATGCTGCTACCAAGCCCTCCTCCTACTTCAAACAGAGAAGCAGATCAAAACCCATCTCCTTTACAGAGCCGGAAGGGAAAGAAGAAGCGTCGAGGATAGAGCTTCGCAAGAGTCGGCAGCAACACATTCTCACAAATCACCGCGTTCTCAG
ATCCATTGTCGGCAAAGCCGGCGTGAGAGAAACCGACACCGTCCTGGAAATCGGCCCAGGCACCGGAAACCTAACCCTAGAGCTTCTGCAGGTCGCCCACAGAGTCATCGCAGTCGAGATTGATCCCCGGATGATCGAAGCAGTTCACCAACGCATACAGGGGACCGAAATGGCCCAGCGATTGGAGTTGGTGGAAGGGG
ACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATGCAACCCTCATCATTCAGAAGGAATTCGGCCGCCTCCTTGTGGCAAAGCCCAGTGATTCCCTCTTCAGTCTCCTGGCTGTAAATGTG
GGTCTTCTGGCCAGAGTCAAGCTCCTTATGGATGTAAGCAAGAAGGATTTTATGCCGCGCCCTCGAGTGAATTCTTCCGTTGTGAGAATCGAATCCAGGGTCTGGCCTCCTCCAGTGGACTTGAGCGAGTGGAATGGATTCACTCGGATGTGTTTCGCCAGTAAGGATAAGACTCTCGGTGCGATCTTCAGGCAGAAAAA
GAATGTTTTCAGTCTTATGAAGAGGACAGAGTTGTGGCATGAGAAGCAGAAATTAGAGGGTAGCCATGGTAATCTGGAAAAAAACCTATCAGATTTATCCTTATTAGGTGAGCTGGATGAGGAAACAACTGATACAGAAGATATAGATGTAGATAGTGATGCAGATAACGAAAAGTTTGTATGTTTCAAAGAGAATATTG
TCAACATTCTCAAAGCAGGTGGATATGAAGAGAAGAGCTCATCTAAACTCTATGTGGAGGAATACTTGAGACTTATTTCTTTGTTTAACAACAAAGGTATACGCTTCTCATAAATCTTTACATTCTCTTGAAGCGGGACTATTCGAATGGGCACTCTTTGAATTGACTGCATATATTTCTTACTGACATACTTGATTGAT
CAACAACCGTGATATGTAATACCTTATTTCCACTGAGGTAGGGAGAAATCAATGAGCGAGTCTGCTTGGAGCAGCCAAAGCTATAACAATGCAAATCCTCAATTTACTACGTTGTGAAGTTGACCTGCCTTCTCCACGAGCCCAATACAGAGTCAGGCACTTATGGCTGTCAAGGAGAGCAAATAGTTCATAGTTCAGGG
TTTGAATCCAAGCAAGGCAATGCATATGTTTCTTCGGTCATTTAAATTTTGTTACTTACTAAATAATCTAAGAGACAAGTTTACTACTCTGAAATTAGTCAAATAGCATTGCAGTATGAGACTTCAGGACTCGAGGCACACAGCTTAAGTGTTATTTCTAGGTCAAAATGGTTTTCCTATCCATTCATAGTATTCAGATC
TGAACCTGGTTTCGATGTAGTTTTCGAATTCGAACCTGGTTATTATGGTTCTCATAGCGATTCCTAGAGTGCCTTACTTTATTATTTTCTCATTTTGTATTCCTGCCTAGATTGATTACAGTTACTGTTTAAAGAAAGGTGGCAGACATCATGTCTAGATGTTTGTTCGCTTGTAACTTTTAACTGTTCATCAAGTTTAA
TCTTGAAGATCTATATCCCTGCCATTTTTTATTTGCTCCCATGGTTATCTTCTTTAAATGCATTCTGCAACAAACAGTGAAGGTATATTTCCATTGGACAATGTTGCAAGAGTAAATAG
>TRINITY_DN48324_c1_g2_i7 from sample A7 / Example unspliced isoform:CAAACCCGGCGGGGGGGTAGGGTTGCTCATTGGCCCGTTGTGACAAGACTTGAAGGGTAGGCGACCCCTGGGATAGAGGCTCTCCCCTGGGATAAAGGGTCTCGGGACGTCTCAGCCCCTGCTGAGTCACAAGTTTCTGGTATATTTGGCTTGCGGGCCAACCCATTCCATTTTCCTTGCGAGGATAACAGCTTTATCAT
GTGATGCCTTCGAAGAAACTTTGAGTTGCAGACCGCCTCGATTCATATAACAGGTGTCTGAGCAGAACCTTTGCCAAACTAACTGGAGGCGTATGACCGAGTAGCTGGGAAGCACGTCTCTGAATGCGAATGCATATCATTCATAAGACCGAACGAGAATGAGAAGAGGTTTTCCTTTCCTCTACATCACACTTCAATCA
CATTCTGCAAGACTTATAAGCTCCAGCGCGGTCATATGTAAAGCCCGTTATGCTGCTACCAAGCCCTCCTCCTACTTCAAACAGAGAAGCAGATCAAAACCCATCTCCTTTACAGAGCCGGAAGGGAAAGAAGAAGCGTCGAGGATAGAGCTTCGCAAGAGTCGGCAGCAACACATTCTCACAAATCACCGCGTTCTCAG
ATCCATTGTCGGCAAAGCCGGCGTGAGAGAAACCGACACCGTCCTGGAAATCGGCCCAGGCACCGGAAACCTAACCCTAGAGCTTCTGCAGGTCGCCCACAGAGTCATCGCAGTCGAGATTGATCCCCGGATGATCGAAGCAGTTCACCAACGCATACAGGGGACCGAAATGGCCCAGCGATTGGAGTTGGTGGAAGGGG
ACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATGCAACCCTCATCATTCAGAAGGAATTCGGCCGCCTCCTTGTGGCAAAGCCCAGTGATTCCCTCTTCAGTCTCCTGGCTGTAAATGTG
GGTCTTCTGGCCAGAGTCAAGCTCCTTATGGATGTAAGCAAGAAGGATTTTATGCCGCGCCCTCGAGTGAATTCTTCCGTTGTGAGAATCGAATCCAGGGTCTGGCCTCCTCCAGTGGACTTGAGCGAGTGGAATGGATTCACTCGGATGTGTTTCGCCAGTAAGGATAAGACTCTCGGTGCGATCTTCAGGCAGAAAAA
GAATGTTTTCAGTCTTATGAAGAGGACAGAGTTGTGGCATGAGAAGCAGAAATTAGAGGGTAGCCATGGTAATCTGGAAAAAAACCTATCAGATTTATCCTTATTAGGTGAGCTGGATGAGGAAACAACTGATACAGAAGATATAGATGTAGATAGTGATGCAGATAACGAAAAGTTTGTATGTTTCAAAGAGAATATTG
TCAACATTCTCAAAGCAGGTGGATATGAAGAGAAGAGCTCATCTAAACTCTATGTGGAGGAATACTTGAGACTTATTTCTTTGTTTAACAACAAAGGTATACGCTTCTCATAAATCTTTACATTCTCTTGAAGCGGGACTATTCGAATGgtaagatgttccataagttatcaaatccccaagtctgtctccctatttttc
gtttacatatttgcgcattttgcagttttaaaccgtatgcagaatgccataaatgataaaagtaggcaggacctggccagatatattatgttccctttgctgtgacagGGCACTCTTTGAATTGACTGCATATATTTCTTACTGACATACTTGATTGATCAACAACCGTGATATGTAATACCTTATTTCCACTGAGGTAG
GGAGAAATCAATGAGCGAGTCTGCTTGGAGCAGCCAAAGCTATAACAATGCAAATCCTCAATTTACTACGTTGTGAAGTTGACCTGCCTTCTCCACGAGCCCAATACAGAGTCAGGCACTTATGGCTGTCAAGGAGAGCAAATAGTTCATAGTTCAGGGTTTGAATCCAAGCAAGGCAATGCATATGTTTCTTCGGTCAT
TTAAATTTTGTTACTTACTAAATAATCTAAGAGACAAGTTTACTACTCTGAAATTAGTCAAATAGCATTGCAGTATGAGACTTCAGGACTCGAGGCACACAGCTTAAGTGTTATTTCTAGGTCAAAATGGTTTTCCTATCCATTCATAGTATTCAGATCTGAACCTGGTTTCGATGTAGTTTTCGAATTCGAACCTGGTT
ATTATGGTTCTCATAGCGATTCCTAGAGTGCCTTACTTTATTATTTTCTCATTTTGTATTCCTGCCTAGATTGATTACAGTTACTGTTTAAAGAAAGGTGGCAGACATCATGTCTAGATGTTTGTTCGCTTGTAACTTTTAACTGTTCATCAAGTTTAATCTTGAAGATCTATATCCCTGCCATTTTTTATTTGCTCCCA
TGGTTATCTTCTTTAAATGCATTCTGCAACAAACAGTGAAGGTATATTTCCATTGGACAATGTTGCAAGAGTAAATAG
Intron 4 GCTATCTCAC ... AAGTTCTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 21.74 | 18 | 7 | 3 |
| A2 | 28.57 | 20 | 4 | 12 |
| A3 | 39.02 | 25 | 18 | 14 |
| A4 | 37.5 | 15 | 13 | 5 |
| A5 | 26.67 | 11 | 0 | 8 |
| A6 | 29.63 | 57 | 24 | 24 |
| A7 | 32.54 | 85 | 59 | 23 |
| A8 | 27.82 | 48 | 28 | 9 |
| A9 | 34.83 | 58 | 40 | 22 |
| A10 | 32.46 | 77 | 31 | 43 |
>TRINITY_DN48324_c1_g2_i7 from sample A7 / Example spliced isoformCAAACCCGGCGGGGGGGTAGGGTTGCTCATTGGCCCGTTGTGACAAGACTTGAAGGGTAGGCGACCCCTGGGATAGAGGCTCTCCCCTGGGATAAAGGGTCTCGGGACGTCTCAGCCCCTGCTGAGTCACAAGTTTCTGGTATATTTGGCTTGCGGGCCAACCCATTCCATTTTCCTTGCGAGGATAACAGCTTTATCAT
GTGATGCCTTCGAAGAAACTTTGAGTTGCAGACCGCCTCGATTCATATAACAGGTGTCTGAGCAGAACCTTTGCCAAACTAACTGGAGGCGTATGACCGAGTAGCTGGGAAGCACGTCTCTGAATGCGAATGCATATCATTCATAAGACCGAACGAGAATGAGAAGAGGTTTTCCTTTCCTCTACATCACACTTCAATCA
CATTCTGCAAGACTTATAAGCTCCAGCGCGGTCATATGTAAAGCCCGTTATGCTGCTACCAAGCCCTCCTCCTACTTCAAACAGAGAAGCAGATCAAAACCCATCTCCTTTACAGAGCCGGAAGGGAAAGAAGAAGCGTCGAGGATAGAGCTTCGCAAGAGTCGGCAGCAACACATTCTCACAAATCACCGCGTTCTCAG
ATCCATTGTCGGCAAAGCCGGCGTGAGAGAAACCGACACCGTCCTGGAAATCGGCCCAGGCACCGGAAACCTAACCCTAGAGCTTCTGCAGGTCGCCCACAGAGTCATCGCAGTCGAGATTGATCCCCGGATGATCGAAGCAGTTCACCAACGCATACAGGGGACCGAAATGGCCCAGCGATTGGAGTTGGTGGAAGGGG
ACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATGCAACCCTCATCATTCAGAAGGAATTCGGCCGCCTCCTTGTGGCAAAGCCCAGTGATTCCCTCTTCAGTCTCCTGGCTGTAAATGTG
GGTCTTCTGGCCAGAGTCAAGCTCCTTATGGATGTAAGCAAGAAGGATTTTATGCCGCGCCCTCGAGTGAATTCTTCCGTTGTGAGAATCGAATCCAGGGTCTGGCCTCCTCCAGTGGACTTGAGCGAGTGGAATGGATTCACTCGGATGTGTTTCGCCAGTAAGGATAAGACTCTCGGTGCGATCTTCAGGCAGAAAAA
GAATGTTTTCAGTCTTATGAAGAGGACAGAGTTGTGGCATGAGAAGCAGAAATTAGAGGGTAGCCATGGTAATCTGGAAAAAAACCTATCAGATTTATCCTTATTAGGTGAGCTGGATGAGGAAACAACTGATACAGAAGATATAGATGTAGATAGTGATGCAGATAACGAAAAGTTTGTATGTTTCAAAGAGAATATTG
TCAACATTCTCAAAGCAGGTGGATATGAAGAGAAGAGCTCATCTAAACTCTATGTGGAGGAATACTTGAGACTTATTTCTTTGTTTAACAACAAAGGTATACGCTTCTCATAAATCTTTACATTCTCTTGAAGCGGGACTATTCGAATGGTAAGATGTTCCATAAGTTATCAAATCCCCAAGTCTGTCTCCCTATTTTTC
GTTTACATATTTGCGCATTTTGCAGTTTTAAACCGTATGCAGAATGCCATAAATGATAAAAGTAGGCAGGACCTGGCCAGATATATTATGTTCCCTTTGCTGTGACAGGGCACTCTTTGAATTGACTGCATATATTTCTTACTGACATACTTGATTGATCAACAACCGTGATATGTAATACCTTATTTCCACTGAGGTAG
GGAGAAATCAATGAGCGAGTCTGCTTGGAGCAGCCAAAGCTATAACAATGCAAATCCTCAATTTACTACGTTGTGAAGTTGACCTGCCTTCTCCACGAGCCCAATACAGAGTCAGGCACTTATGGCTGTCAAGGAGAGCAAATAGTTCATAGTTCAGGGTTTGAATCCAAGCAAGGCAATGCATATGTTTCTTCGGTCAT
TTAAATTTTGTTACTTACTAAATAATCTAAGAGACAAGTTTACTACTCTGAAATTAGTCAAATAGCATTGCAGTATGAGACTTCAGGACTCGAGGCACACAGCTTAAGTGTTATTTCTAGGTCAAAATGGTTTTCCTATCCATTCATAGTATTCAGATCTGAACCTGGTTTCGATGTAGTTTTCGAATTCGAACCTGGTT
ATTATGGTTCTCATAGCGATTCCTAGAGTGCCTTACTTTATTATTTTCTCATTTTGTATTCCTGCCTAGATTGATTACAGTTACTGTTTAAAGAAAGGTGGCAGACATCATGTCTAGATGTTTGTTCGCTTGTAACTTTTAACTGTTCATCAAGTTTAATCTTGAAGATCTATATCCCTGCCATTTTTTATTTGCTCCCA
TGGTTATCTTCTTTAAATGCATTCTGCAACAAACAGTGAAGGTATATTTCCATTGGACAATGTTGCAAGAGTAAATAG
>TRINITY_DN48324_c1_g2_i5 from sample A7 / Example unspliced isoform:CAAACCCGGCGGGGGGGTAGGGTTGCTCATTGGCCCGTTGTGACAAGACTTGAAGGGTAGGCGACCCCTGGGATAGAGGCTCTCCCCTGGGATAAAGGGTCTCGGGACGTCTCAGCCCCTGCTGAGTCACAAGTTTCTGGTATATTTGGCTTGCGGGCCAACCCATTCCATTTTCCTTGCGAGGATAACAGCTTTATCAT
GTGATGCCTTCGAAGAAACTTTGAGTTGCAGACCGCCTCGATTCATATAACAGGTGTCTGAGCAGAACCTTTGCCAAACTAACTGGAGGCGTATGACCGAGTAGCTGGGAAGCACGTCTCTGAATGCGAATGCATATCATTCATAAGACCGAACGAGAATGAGAAGAGGTTTTCCTTTCCTCTACATCACACTTCAATCA
CATTCTGCAAGACTTATAAGCTCCAGCGCGGTCATATGTAAAGCCCGTTATGCTGCTACCAAGCCCTCCTCCTACTTCAAACAGAGAAGCAGATCAAAACCCATCTCCTTTACAGAGCCGGAAGGGAAAGAAGAAGCGTCGAGGATAGAGCTTCGCAAGAGTCGGCAGCAACACATTCTCACAAATCACCGCGTTCTCAG
ATCCATTGTCGGCAAAGCCGGCGTGAGAGAAACCGACACCGTCCTGGAAATCGGCCCAGGCACCGGAAACCTAACCCTAGAGCTTCTGCAGGTCGCCCACAGAGTCATCGCAGTCGAGATTGATCCCCGGATGATCGAAGCAGTTCACCAACGCATACAGGGGACCGAAATGGCCCAGCGATTGGAGgctatctcacccg
gcatctgcttaggttcttgacggagcaaggtgtaagtcctaagcgaatttgtgtgaatatttatcctcaacctcttatttctgttgtaagcctgctacaaatgcattgtaatatttccatagtggagaaaggcacacctgctgtagttgtaaatatcatacacgacaacaatcttgaagtggtttatgaggtatctcaca
cattaaaagctttatcaagctttgagttgaagttctcagTTGGTGGAAGGGGACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATGCAACCCTCAT
Intron 5 GCTATCTCAC ... TTATGGATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.4 | 18 | 7 | 4 |
| A2 | 21.57 | 20 | 4 | 7 |
| A3 | 36.71 | 25 | 18 | 11 |
| A4 | 33.33 | 15 | 13 | 2 |
| A5 | 21.43 | 11 | 0 | 6 |
| A6 | 26.45 | 57 | 24 | 17 |
| A7 | 30.89 | 85 | 59 | 17 |
| A8 | 24.41 | 48 | 28 | 3 |
| A9 | 28.83 | 58 | 40 | 7 |
| A10 | 23.38 | 77 | 31 | 16 |
>TRINITY_DN48324_c1_g2_i7 from sample A7 / Example spliced isoformCAAACCCGGCGGGGGGGTAGGGTTGCTCATTGGCCCGTTGTGACAAGACTTGAAGGGTAGGCGACCCCTGGGATAGAGGCTCTCCCCTGGGATAAAGGGTCTCGGGACGTCTCAGCCCCTGCTGAGTCACAAGTTTCTGGTATATTTGGCTTGCGGGCCAACCCATTCCATTTTCCTTGCGAGGATAACAGCTTTATCAT
GTGATGCCTTCGAAGAAACTTTGAGTTGCAGACCGCCTCGATTCATATAACAGGTGTCTGAGCAGAACCTTTGCCAAACTAACTGGAGGCGTATGACCGAGTAGCTGGGAAGCACGTCTCTGAATGCGAATGCATATCATTCATAAGACCGAACGAGAATGAGAAGAGGTTTTCCTTTCCTCTACATCACACTTCAATCA
CATTCTGCAAGACTTATAAGCTCCAGCGCGGTCATATGTAAAGCCCGTTATGCTGCTACCAAGCCCTCCTCCTACTTCAAACAGAGAAGCAGATCAAAACCCATCTCCTTTACAGAGCCGGAAGGGAAAGAAGAAGCGTCGAGGATAGAGCTTCGCAAGAGTCGGCAGCAACACATTCTCACAAATCACCGCGTTCTCAG
ATCCATTGTCGGCAAAGCCGGCGTGAGAGAAACCGACACCGTCCTGGAAATCGGCCCAGGCACCGGAAACCTAACCCTAGAGCTTCTGCAGGTCGCCCACAGAGTCATCGCAGTCGAGATTGATCCCCGGATGATCGAAGCAGTTCACCAACGCATACAGGGGACCGAAATGGCCCAGCGATTGGAGTTGGTGGAAGGGG
ACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATGCAACCCTCATCATTCAGAAGGAATTCGGCCGCCTCCTTGTGGCAAAGCCCAGTGATTCCCTCTTCAGTCTCCTGGCTGTAAATGTG
GGTCTTCTGGCCAGAGTCAAGCTCCTTATGGATGTAAGCAAGAAGGATTTTATGCCGCGCCCTCGAGTGAATTCTTCCGTTGTGAGAATCGAATCCAGGGTCTGGCCTCCTCCAGTGGACTTGAGCGAGTGGAATGGATTCACTCGGATGTGTTTCGCCAGTAAGGATAAGACTCTCGGTGCGATCTTCAGGCAGAAAAA
GAATGTTTTCAGTCTTATGAAGAGGACAGAGTTGTGGCATGAGAAGCAGAAATTAGAGGGTAGCCATGGTAATCTGGAAAAAAACCTATCAGATTTATCCTTATTAGGTGAGCTGGATGAGGAAACAACTGATACAGAAGATATAGATGTAGATAGTGATGCAGATAACGAAAAGTTTGTATGTTTCAAAGAGAATATTG
TCAACATTCTCAAAGCAGGTGGATATGAAGAGAAGAGCTCATCTAAACTCTATGTGGAGGAATACTTGAGACTTATTTCTTTGTTTAACAACAAAGGTATACGCTTCTCATAAATCTTTACATTCTCTTGAAGCGGGACTATTCGAATGGTAAGATGTTCCATAAGTTATCAAATCCCCAAGTCTGTCTCCCTATTTTTC
GTTTACATATTTGCGCATTTTGCAGTTTTAAACCGTATGCAGAATGCCATAAATGATAAAAGTAGGCAGGACCTGGCCAGATATATTATGTTCCCTTTGCTGTGACAGGGCACTCTTTGAATTGACTGCATATATTTCTTACTGACATACTTGATTGATCAACAACCGTGATATGTAATACCTTATTTCCACTGAGGTAG
GGAGAAATCAATGAGCGAGTCTGCTTGGAGCAGCCAAAGCTATAACAATGCAAATCCTCAATTTACTACGTTGTGAAGTTGACCTGCCTTCTCCACGAGCCCAATACAGAGTCAGGCACTTATGGCTGTCAAGGAGAGCAAATAGTTCATAGTTCAGGGTTTGAATCCAAGCAAGGCAATGCATATGTTTCTTCGGTCAT
TTAAATTTTGTTACTTACTAAATAATCTAAGAGACAAGTTTACTACTCTGAAATTAGTCAAATAGCATTGCAGTATGAGACTTCAGGACTCGAGGCACACAGCTTAAGTGTTATTTCTAGGTCAAAATGGTTTTCCTATCCATTCATAGTATTCAGATCTGAACCTGGTTTCGATGTAGTTTTCGAATTCGAACCTGGTT
ATTATGGTTCTCATAGCGATTCCTAGAGTGCCTTACTTTATTATTTTCTCATTTTGTATTCCTGCCTAGATTGATTACAGTTACTGTTTAAAGAAAGGTGGCAGACATCATGTCTAGATGTTTGTTCGCTTGTAACTTTTAACTGTTCATCAAGTTTAATCTTGAAGATCTATATCCCTGCCATTTTTTATTTGCTCCCA
TGGTTATCTTCTTTAAATGCATTCTGCAACAAACAGTGAAGGTATATTTCCATTGGACAATGTTGCAAGAGTAAATAG
>TRINITY_DN48324_c1_g2_i3 from sample A7 / Example unspliced isoform:CAAACCCGGCGGGGGGGTAGGGTTGCTCATTGGCCCGTTGTGACAAGACTTGAAGGGTAGGCGACCCCTGGGATAGAGGCTCTCCCCTGGGATAAAGGGTCTCGGGACGTCTCAGCCCCTGCTGAGTCACAAGTTTCTGGTATATTTGGCTTGCGGGCCAACCCATTCCATTTTCCTTGCGAGGATAACAGCTTTATCAT
GTGATGCCTTCGAAGAAACTTTGAGTTGCAGACCGCCTCGATTCATATAACAGGTGTCTGAGCAGAACCTTTGCCAAACTAACTGGAGGCGTATGACCGAGTAGCTGGGAAGCACGTCTCTGAATGCGAATGCATATCATTCATAAGACCGAACGAGAATGAGAAGAGGTTTTCCTTTCCTCTACATCACACTTCAATCA
CATTCTGCAAGACTTATAAGCTCCAGCGCGGTCATATGTAAAGCCCGTTATGCTGCTACCAAGCCCTCCTCCTACTTCAAACAGAGAAGCAGATCAAAACCCATCTCCTTTACAGAGCCGGAAGGGAAAGAAGAAGCGTCGAGGATAGAGCTTCGCAAGAGTCGGCAGCAACACATTCTCACAAATCACCGCGTTCTCAG
ATCCATTGTCGGCAAAGCCGGCGTGAGAGAAACCGACACCGTCCTGGAAATCGGCCCAGGCACCGGAAACCTAACCCTAGAGCTTCTGCAGGTCGCCCACAGAGTCATCGCAGTCGAGATTGATCCCCGGATGATCGAAGCAGTTCACCAACGCATACAGGGGACCGAAATGGCCCAGCGATTGGAGgctatctcacccg
gcatctgcttaggttcttgacggagcaaggtgtaagtcctaagcgaatttgtgtgaatatttatcctcaacctcttatttctgttgtaagcctgctacaaatgcattgtaatatttccatagtggagaaaggcacacctgctgtagttgtaaatatcatacacgacaacaatcttgaagtggtttatgaggtatctcaca
cattaaaagctttatcaagctttgagttgaagttctcaggtagatatgataacatactcctctggtactaacttcttttaaaaatgtccgcagaattaataagaaccctctcttataattgctatatttagtgatgctttcttagttgtcttttgcaatattttcttaattttttgtcattgctgttttgtgatgcttct
tagttccaatcttactaaagatcaaagttgcgtttctctcatatgattctctttttgcttctgttatggatagTTGGTGGAAGGGGACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATG
CAACCCTCAT
Intron 6 GTAGATATGA ... TTATGGATAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 45.45 | 3 | 1 | 4 |
| A2 | 35.14 | 12 | 6 | 7 |
| A3 | 33.33 | 14 | 3 | 11 |
| A4 | 16.67 | 5 | 0 | 2 |
| A5 | 36 | 8 | 3 | 6 |
| A6 | 40 | 24 | 15 | 17 |
| A7 | 46.51 | 23 | 23 | 17 |
| A8 | 66.67 | 9 | 33 | 3 |
| A9 | 33.33 | 22 | 15 | 7 |
| A10 | 21.82 | 43 | 8 | 16 |
>TRINITY_DN48324_c1_g2_i5 from sample A7 / Example spliced isoformCAAACCCGGCGGGGGGGTAGGGTTGCTCATTGGCCCGTTGTGACAAGACTTGAAGGGTAGGCGACCCCTGGGATAGAGGCTCTCCCCTGGGATAAAGGGTCTCGGGACGTCTCAGCCCCTGCTGAGTCACAAGTTTCTGGTATATTTGGCTTGCGGGCCAACCCATTCCATTTTCCTTGCGAGGATAACAGCTTTATCAT
GTGATGCCTTCGAAGAAACTTTGAGTTGCAGACCGCCTCGATTCATATAACAGGTGTCTGAGCAGAACCTTTGCCAAACTAACTGGAGGCGTATGACCGAGTAGCTGGGAAGCACGTCTCTGAATGCGAATGCATATCATTCATAAGACCGAACGAGAATGAGAAGAGGTTTTCCTTTCCTCTACATCACACTTCAATCA
CATTCTGCAAGACTTATAAGCTCCAGCGCGGTCATATGTAAAGCCCGTTATGCTGCTACCAAGCCCTCCTCCTACTTCAAACAGAGAAGCAGATCAAAACCCATCTCCTTTACAGAGCCGGAAGGGAAAGAAGAAGCGTCGAGGATAGAGCTTCGCAAGAGTCGGCAGCAACACATTCTCACAAATCACCGCGTTCTCAG
ATCCATTGTCGGCAAAGCCGGCGTGAGAGAAACCGACACCGTCCTGGAAATCGGCCCAGGCACCGGAAACCTAACCCTAGAGCTTCTGCAGGTCGCCCACAGAGTCATCGCAGTCGAGATTGATCCCCGGATGATCGAAGCAGTTCACCAACGCATACAGGGGACCGAAATGGCCCAGCGATTGGAGGCTATCTCACCCG
GCATCTGCTTAGGTTCTTGACGGAGCAAGGTGTAAGTCCTAAGCGAATTTGTGTGAATATTTATCCTCAACCTCTTATTTCTGTTGTAAGCCTGCTACAAATGCATTGTAATATTTCCATAGTGGAGAAAGGCACACCTGCTGTAGTTGTAAATATCATACACGACAACAATCTTGAAGTGGTTTATGAGGTATCTCACA
CATTAAAAGCTTTATCAAGCTTTGAGTTGAAGTTCTCAGTTGGTGGAAGGGGACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATGCAACCCTCAT
>TRINITY_DN48324_c1_g2_i4 from sample A7 / Example unspliced isoform:CGAAATGGCCCAGCGATTGGAGGTGAGTTCCATAGTCATGCCCAGTTTTATCATTCATTCACCTTAATTACAAAGGAAATCTTAGGCATTGGTATAATTATCCTGATTGTGAAGGTCTTGGTTGCTGTTTATATTCCCACCAATGTTCAAATCGCTTAGAGATATGTTCCCTTTCCAGGCTATCTCACCCGGCATCTGCT
TAGGTTCTTGACGGAGCAAGGTGTAAGTCCTAAGCGAATTTGTGTGAATATTTATCCTCAACCTCTTATTTCTGTTGTAAGCCTGCTACAAATGCATTGTAATATTTCCATAGTGGAGAAAGGCACACCTGCTGTAGTTGTAAATATCATACACGACAACAATCTTGAAGTGGTTTATGAGGTATCTCACACATTAAAAG
CTTTATCAAGCTTTGAGTTGAAGTTCTCAGgtagatatgataacatactcctctggtactaacttcttttaaaaatgtccgcagaattaataagaaccctctcttataattgctatatttagtgatgctttcttagttgtcttttgcaatattttcttaattttttgtcattgctgttttgtgatgcttcttagttccaa
tcttactaaagatcaaagttgcgtttctctcatatgattctctttttgcttctgttatggatagTTGGTGGAAGGGGACATACTGCACACAGAATTGCCATCTTTCGACATATGTGTAGCCAATATCCCTGACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCTGCCATGCCCAAGTTTCGAAATGCAACCCTCA
T
Intron 7 GTATACACTT ... ACATTTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 63.22 | 16 | 33 | 22 |
| A2 | 83.33 | 3 | 24 | 6 |
| A3 | 84.85 | 5 | 39 | 17 |
| A4 | 81.82 | 3 | 18 | 9 |
| A5 | 75 | 3 | 10 | 8 |
| A6 | 67.65 | 22 | 56 | 36 |
| A7 | 70.13 | 46 | 129 | 87 |
| A8 | 73.77 | 56 | 204 | 111 |
| A9 | 73.86 | 43 | 148 | 95 |
| A10 | 78.63 | 25 | 124 | 60 |
>TRINITY_DN113693_c0_g2_i1 from sample A1 / Example spliced isoformAAAATTTCCCAGCAGAACCCCAGCCTGCTTTATTTGCTGCAGATTGAACCGAACTTATGGTCGAGTAACAGGGAAGCACATCCCTAAATACCAATGCAGACCATCCATAAGATCGTCCGAGAATGAGGAGAGCTTTGTCTTCCCTCTACTTGACACTTCAATCACGTTCTGTCAGGCTCATAAGCTCCAGCACGGTCACA
TGTAAAACTCATTATGCTGCTGCCAAGCCTTACTCCGACTTCAAAAAGAGAAGCAGATCAAAACCCATATCATTTACAGAGATGAACGATGGCAAGAAAGGGGAAGAGGAGGAAGAAGCACCGAGGATAGAACTTCACAAGAGTCGTGGGCAGCACATTCTCACAAATCCTCGCGTTCTCAAATCCATCGTTGACAAAGC
GGGCGTTAGAGAAACCGACACCGTCCTGGAAATCGGTCCGGGTACTGGAAACCTAACCCTAGAGCTTCTGCAGGCCGCCCACAGAGTCATCGCAGTTGAGATCGATCCCCGGATGATCGAAGCAGTTCACAAACGCACACAGGGGACTGAAATGGCTCAGCGATTGGAGTTGGTGCGAGGGGACATACTGAGAACAGAGT
TGCCATCTTTTGACATATGTGTAGCCAATATCCCTTACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCCAACAGGCCCAAGTTTCGAAATGCAACCCTCATGCTTCAGAAGGAATTTGGTCGCCGCCTCGTGGCAAAGCCTGGCGATTCTCTCTTCAATCGTCTGGCTGTCAATGTGGATCTTCTGGCCAGTACC
AAGCTCCTTATGGATGTGAGCAAGAGAGATTTTACGCCCTGCCCTAAAGTGGATTCTTCTGTTGTGAGAATCGAACCTAGGGTCTGGCCTCCTCCAGTCGACTTGAGTGAATGGAATAGATTTACTTTGATGTGTTTCACCAGAAAGAATAAGACTCTAGGTGCAATCTTCAGGCAGAAAAAGACTGTTTTTAGTCTTAT
GAAGAAAGCAGAGTTGTGGCATGAGAAGCAAAAATTAGAGGGCGGTAATCTGGAAAAAATCGTTTCAGATTTATCTTTATTGGGTGAGGTGGATGATGACACGACTGATACAGAAGATTCAGATGCAGAGAGTGATACAGATAACGAAAAGCTTGTATGCTTCAAAGAGAAAATTGTCAACATTCTCAAATCAGGTGGAT
ATGAAGACAAGAGATCATCTAAACTGTCTGTGGAGGAATTCTTGAGACTTATTTCTTTGTTTAACAACGAAGTTCTAAGCCGTATGCAGAATGCCATCACAGTAGGCATGACCTGTCCGGATAAATCATCTTCCTTTTGCTGTGACAGAGCACTCCTTGTATATATCTTACTTATTTCAACCGAGGTAATGATAATTCAA
TGAGAGAGTCTGCTTGCTCATTAACATATTGTGAAGCAGCCAAGCTAGAACAATACAAATCCTCAATTTAAGACGTTGTGAAGTTCACCTGCCTTCTCCATGAGTCCGATACAAAGTCAGGCAATTATGATTGTCAATGAGAGCAAACAGTTCATACATCAGAGTTTGAAGCCAAACAGAGCCATGCATATTTTCTTGGG
TAGTTTAAATTTTATGACCTATTAAATAATCTGAGAGAAAAATTACTACTCTGAAATCAGTCAAATTGCATTGCAATATGAGACTCAGCACTCGAGGCAAATAGCTCGACTCTTATTTATAGGTCAAAATTGTTTGCCTCATCTATTGATATTATTCTGATCTGAAAAATTGTATCTTAGGTTACTAATAACTTTTGTTG
TTTAGATGTAGCTTCGAGTAGA
>TRINITY_DN113693_c0_g2_i2 from sample A1 / Example unspliced isoform:TGAGATTAGCCTAATCCGTGTCCTTTGCGAGTCTCCTTGTGCTTGTGATTGATGTGTTTGTGATGCCTTCTTAATTGTCTTTTTTGTAATGCCTACCTTATTCCTTGATATTGTTGTTTTTGGTGACTTTTGTGTAATGCCTACTTTATTCCTTGTAATTGTTGTTTTTGGTGGTGCATTTTAAGCTTACTATTAATCAA
AGTTGTTCTTCGCTAATATTACTATCTACTCTTTCTTTTCTGTTATGGATAGTTGGTGCGAGGGGACATACTGAGAACAGAGTTGCCATCTTTTGACATATGTGTAGCCAATATCCCTTACCAGATATCTTCTCCGCTCATCTTCAAGCTCTTGTCCAACAGGCCCAAGTTTCGAAATGCAACCCTCATGCTTCAGAAGG
AATTTGGTCGCCGCCTCGTGGCAAAGCCTGGCGATTCTCTCTTCAATCGTCTGGCTGTCAATGTGGATCTTCTGGCCAGTACCAAGCTCCTTATGGATGTGAGCAAGAGAGATTTTACGCCCTGCCCTAAAGTGGATTCTTCTGTTGTGAGAATCGAACCTAGGGTCTGGCCTCCTCCAGTCGACTTGAGTGAATGGAAT
AGATTTACTTTGATGTGTTTCACCAGAAAGAATAAGACTCTAGGTGCAATCTTCAGGCAGAAAAAGACTGTTTTTAGTCTTATGAAGAAAGCAGAGTTGTGGCATGAGAAGCAAAAATTAGAGGGCGGTAATCTGGAAAAAATCGTTTCAGATTTATCTTTATTGGGTGAGGTGGATGATGACACGACTGATACAGAAGA
TTCAGATGCAGAGAGTGATACAGATAACGAAAAGCTTGTATGCTTCAAAGAGAAAATTGTCAACATTCTCAAATCAGGTGGATATGAAGACAAGAGATCATCTAAACTGTCTGTGGAGGAATTCTTGAGACTTATTTCTTTGTTTAACAACGAAGgtatacacttctcataaatcattacattttctttaaaaaggagaa
tttgtacgataagatgcttcatgattatcaattacctgactctgtttccctatttttcattctgcacatttgaagTTCTAAGCCGTATGCAGAATGCCATCACAGTAGGCATGACCTGTCCGGATAAATCATCTTCCTTTTGCTGTGACAGAGCACTCCTTGTATATATCTTACTTATTTCAACCGAGGTAATGATAATT
CAATGAGAGAGTCTGCTTGCTCATTAACATATTGTGAAGCAGCCAAGCTAGAACAATACAAATCCTCAATTTAAGACGTTGTGAAGTTCACCTGCCTTCTCCATGAGTCCGATACAAAGTCAGGCAATTATGATTGTCAATGAGAGCAAACAGTTCATACATCAGAGTTTGAAGCCAAACAGAGCCATGCATATTTTCTT
GGGTAGTTTAAATTTTATGACCTATTAAATAATCTGAGAGAAAAATTACTACTCTGAAATCAGTCAAATTGCATTGCAATATGAGACTCAGCACTCGAGGCAAATAGCTCGACTCTTATTTATAGGTCAAAATTGTTTGCCTCATCTATTGATATTATTCTGATCTGAAAAATTGTATCTTAGGTTACTAATAACTTTTG
TTGTTTAGATGTAGCTTCGAGTAGA