sp|Q8VYN2|VAP42_ARATH ----> Vesicle-associated protein 4-2

Intron 1 GTATTCCTTG ... CCCATCCAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	86.05	3	20	17
A2	89.74	4	37	33
A3	85.42	7	42	40
A4	81.4	4	20	15
A5	91.3	1	11	10
A6	94.83	7	131	126
A7	90.91	12	127	113
A8	86.94	19	135	118
A9	92.16	10	123	112
A10	92.25	11	139	123

>TRINITY_DN43841_c0_g2_i8 from sample A8 / Example spliced isoform

CATTGAAATCCGCTGAGTTTTCAGAGCTGAGCTGTTTCTTGAGGAGGAGAGGATTTAGGAGAGGTTCGTAACTGGAATTTGGCACGGATTCTTGTCGGAATTTGGAAGATTTGAAGCCGGGAATTGAAAGATTTGGAGCCGGCACAGTGCTTATTGAAGTCGATATACTCTTAATTCGACATTTTCTGTGTGAATGTCAT
GGGGCGAAACCCTTCGACATTTTTGCAGGTGGGTTTTGATGTCTTTAAGCGTGTCAAACGGTGAGCTCTTCTGCGGGAAAGCTGATTGTAAATCGACCGTGTGTTTAGAGCATTTGCTAAGGTTCCATGGTGGATTTGAGCTAATATCTAGTTAGCCGTGAAAAATCCAACATCGAGTCTTCCAAATTTGCAAAGTTAGG
TTTGAAGCCGACGGAACTTTGAGGTTCTAAGGTGTACAGGAAAATAATGGTGAAAATACACCGGTTTAGTAGAATTTGGTTGGGATTTGGAGCTACGCTTGTTTTCGAATAATCCATTTTCCGGCGTTTTTTTTTCCTGGAAATTGAAGTTAAAGCAAGCAAAGTAATTTGCCTTTATTCCGAATTTAGGGAAATATTGT
TTTACGGTAAAATTTTCGGTGAGGAGCAGATTGACAGCAATTTTCAAGTGTCTCCATGAGTTTTTAGAGGTTATTGTTGAAGCAGTTAGCCTGATTCTTTTTTCAACAATGGATCCCGCGTTTCGTGGAGAGTGTCAGAAAAAACTGAAAACATTAGGCCAAAGGCCGTACAAGGCATGATCCAGCGGTGGTTTGAATTT
TCTGCGTCTTCATTTCGTTGTCATTTGGTATCTTTTTGGGTGAAAAGTGGCACTACAGCTGAAATTTAAGGTAGGGAAGAGTTTCAAAGCTCAAGAATTTGTAGATCGTGCTCAGCATGGCCGGCGCGGTTGAGTCTGTTCCGAGTCCGAGCTCGGAAAATGGAACTTTACCAGGTTGTAGACTCTGCACATTGCCGTGG
TGGCAGAAAAAGCCTTCGGAAGGGCATCGGGATGTATCTGGGAACAGCGCTCGGCGCCCCCCTGTTCAGAACGGGCAATCTTTTATTGCATCTGCAAAAGCGTCCCTGTTAACTAAGCGCCGGCTCCGACTTGATCCAGAGGCAAAGCTTTTCTTCATGTACGAACCTGGAAAGCAAGTTTCCAGCGTTGTCAGGATAAA
GAATATCAGTCGGTCGTCTGTTGCCTTTAAATTCCAGACAAATGCTCCCAAGAGCTGTTTTATGAGACCCCCAAGCGGTATCCTTGCTCCAAAGCAGTCGATAACAACAACTGTTGTAAAATTTGTAGAGCAGCCAGAAAACTCTCAGGAAAAGAAGAAGACGAAGGATAAATTCAAAATTGTGAGCTTGAAAGTAAGAG
AGGGCATTGAATATACTCCAGAATTGTTTGACGAGAATAAGGACTCATTGACAGTGGAGAAAGTCTTGCGTGTGGAGCTGGAGAAATTGAAGAAGCATATAGCAGAAGGAGAAATTGAAGAAGCATATAGCAGAAGGAGAAATTGAAGAAGCATATAG

>TRINITY_DN43841_c0_g2_i1 from sample A8 / Example unspliced isoform:

CATTGAAATCCGCTGAGTTTTCAGAGCTGAGCTGTTTCTTGAGGAGGAGAGGATTTAGGAGAGGTTCGTAACTGGAATTTGGCACGGATTCTTGTCGGAATTTGGAAGATTTGAAGCCGGGAATTGAAAGATTTGGAGCCGGCACAGTGCTTATTGAAGTCGATATACTCTTAATTCGACATTTTCTGTATGTCATGGGG
CGAAACCCTTCGACATTTTTGCAGGTGGGTTTTGATGTCTTTAAGCGTGTCAAACGGTGAGCTCTTCTGCGGGAAAGCTGATTGTAAATCGACCGTGTGTTTAGAGCATTTGCTAAGGTTCCATGGTGGATTTGAGCTAATATCTAGTTAGCCGTGAAAAATCCAACATCGAGTCTTCCAAATTTGCAAAGTTAGGTTTG
AAGCCGACGGAACTTTGAGGTTCTAAGGTGTACAGGAAAATAATGGTGAAAATACACCGGTTTAGTAGAATTTGGTTGGGATTTGGAGCTACGCTTGTTTTCGAATAATCCATTTTCCGGCGTTTTTTTTTCCTGGAAATTGAAGTTAAAGCAAGCAAAGTAATTTGCCTTTATTCCGAATTTAGGGAAATATTGTTTTA
CGGTAAAATTTTCGGTGAGGAGCAGATTGACAGCAATTTTCAAGTGTCTCCATGAGTTTTTAGAGGTTATTGTTGAAGCAGTTAGCCTGATTCTTTTTTCAACAATGGATCCCGCGTTTCGTGGAGAGTGTCAGAAAAAACTGAAAACATTAGGCCAAAGGCCGTACAAGGCATGATCCAGCGGTGGTTTGAATTTTCTG
CGTCTTCATTTCGTTGTCATTTGGTATCTTTTTGGGTGAAAAGTGGCACTACAGCTGAAATTTAAGGTAGGGAAGAGTTTCAAAGCTCAAGAATTTGTAGATCGTGCTCAGCATGGCCGGCGCGGTTGAGTCTGTTCCGAGTCCGAGCTCGGAAAATGGAACTTTACCAGGTTGTAGACTCTGCACATTGCCGTGGTGGC
AGAAAAAGCCTTCGGAAGGGCATCGGGATGTATCTGGGAACAGCGCTCGGCGCCCCCCTGTTCAGAACGGGCAATCTTTTATTGCATCTGCAAAAGCGTCCCTGTTAACTTAGCGCCAGCTCCGACTTGATCCAGAGGCAAAGCTTTTCTTCATGTACGAACCTGGAAAGCAAGTTTCCAGCGTTGTCAGGATAAAGAAT
ATCAGTCGGTCGTCTGTTGCCTTTAAATTCCAGACAAATGCTCCCAAGAGCTGTTTTATGAGACCCCCAAGCGGTATCCTTGCTCCAAAGCAGTCGATAACAACAACTGTTGTAAAATTTGTAGAGCAGCCAGAAAACTCTCAGGAAAAGAAGAAGACGAAGGATAAATTCAAAATTGTGAGCTTGAAAGTAAGAGAGGG
CGTTGAATATACTCCGGAATTGTTTGACGAGAATAAGGACTCATTGACAGTGGAGAAAGTCTTGCGTGTGgtattccttgatccactacgcccatccaagGAGCTGGAGAAATTGAAGAAGCGTATAGCAGAAGCAGAAGCTGATAATGAAGCACGCAAGAAGCCTCTAGATGACAAGGCTGC