NA ----> NA
Intron 1 GTTGGGGTTA ... GGGCGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 42.42 | 19 | 12 | 16 |
| A2 | 48 | 13 | 8 | 16 |
| A3 | 45.95 | 20 | 13 | 21 |
| A4 | 54.05 | 17 | 11 | 29 |
| A5 | 82.05 | 1.7 | 2.7 | 12.3 |
| A6 | 53.94 | 69.3 | 53.3 | 109 |
| A7 | 46.19 | 77.2 | 45.6 | 87 |
| A8 | 52.9 | 69 | 47 | 108 |
| A9 | 49.26 | 114.7 | 48.7 | 174 |
| A10 | 49.46 | 73 | 62.9 | 80 |
>TRINITY_DN95688_c0_g1_i3 from sample A1 / Example spliced isoformCGGTGCGGGTCGCCGCTATACGTAGGGCCCAGGGGTAGAACTGATTTAGCAATCCCTCGAGATCTCTGCCAAACCAGCAGTTAAGGTAGGGCGAGATGGAGATGGATCCCATCCTTTCTCCTTCTTCTGAACAAGATGAATGGGATGCTGATGGCTTTGAAATTCCAACCCTGAAGTTGAAGAAGTCTTCTTTGGAAAAA
AAGGAATCTGTTGCGAAGAATTTCAGTTTATCTACTCAAAAGGTAATCACTGTAAATGATCAGATTTATCTAGGGCCACATGGTGCACCACCTTCACAAGTGAAGCAACAAGACTTCAATGCGGCTGGGAAGAACCAACGAATTAAGCAAAAGCTTAAGGAAGATGATAAGAAGAAGTTGCCCCAGGTCATAAGAACCAA
CGAATTAAGCAAAAGCTTAAGGAAGATGATAAGAAGAAGTTGCCCCAGGTCATGAGAATAAGGTAGGAAGTTTGAGAGATCTCTTGGATATAAAGGAATCATGGCAATACCGATGCAATCTACTAGAGGATGGCCAGTTATACTTTGCCATGAGTCTCAGTTTGAGTGCCTCACTTATTAATTTTTCTAGTTTTACTTGA
GCAAAAAGCCAAAAGTAGTGATATCTTTTAATAGATGGCAGAATATGCTTTCTTTTGTAGATTGCATGGTTCTCAGTATCAAGTTATCTTGGAGACAATCCCAATATTCTGCTTATCTTTTCCATTTGCAATGGAGTTAGTTTACCTGTGTTTTTCCAGAGAAAGATATCTCTAATGACATGTGATATTTTTCTTGCCAA
ATATGTTGACTTATTTTAAATTATTCTATAATGATGCATTAGGTCTGTGCCTTTCAAGATGTTATTTTCAGTTTGCTAGTATTTAGTGGCAAGGGAATGAAGTCCAGTGTACAGTGAAATGCTTTTTCATACACACGGTTCTCGTTGTGAGTGGTAGGTATTTTCCAACAAAAGTGACATCATTCTCTATTTTAGTGGGT
TTGTTTGTTTCATCTTGGCTGTTATAATATATTTGTTTGCCAATTTCCCATCTCTTTATGCTTTGAATACTATATCGTTAATTGCTGCTTTATTTCCATTGTTTTACAGTACCTTTCTATGACTTATTGAATGTACTCGGTAATTATGGCTCCTAAAAGTTGC
>TRINITY_DN95688_c0_g1_i1 from sample A1 / Example unspliced isoform:CGGTGCGGGTCGCCGCTATACGTAGGGCCCAGGGGTAGAACTGATTTAGCAATCCCTCGAGATCTCTGCCAAACCAGCAGTTAAGgttggggttaaatgaaatggcaccttgtgaacatttgaagccgttggctatttaagaaattgtgtctaagtttagagtgacagatcggctcaactattttttcatctggttcctt
gtatcaacaatgattgatcttggaggagcaaagaaattgttaggtatttagtggttttattgtttgagggaattgaatcccatgagcttgggcgtgcagGTAGGGCGAGATGGAGATGGATCCCATCCTTTCTCCTTCTTCTGAACAAGATGAATGGGATGCTGATGGCTTTGAAATTCCAACCCTGAAGTTGAAGAAGT
CTTCTTTGGAAAAAAAGGAATCTGTTGCGAAGAATTTCAGTTTATCTACTCAAAAGGTAATCACTGTAAATGATCAGATTTATCTAGGGCCACATGGTGCACCACCTTCACAAGTGAAGCAACAAGACTTCAATGCGGCTGGGAAGAACCAACGAATTAAGCAAAAGCTTAAGGAAGATGATAAGAAGAAGTTGCCCCAG
GTCATAAGAACCAACGAATTAAGCAAAAGCTTAAGGAAGATGATAAGAAGAAGTTGCCCCAGGTCATGAGAATAAGGTAGGAAGTTTGAGAGATCTCTTGGATATAAAGGAATCATGGCAATACCGATGCAATCTACTAGAGGATGGCCAGTTATACTTTGCCATGAGTCTCAGTTTGAGTGCCTCACTTATTAATTTTT
CTAGTTTTACTTGAGCAAAAAGCCAAAAGTAGTGATATCTTTTAATAGATGGCAGAATATGCTTTCTTTTGTAGATTGCATGGTTCTCAGTATCAAGTTATCTTGGAGACAATCCCAATATTCTGCTTATCTTTTCCATTTGCAATGGAGTTAGTTTACCTGTGTTTTTCCAGAGAAAGATATCTCTAATGACATGTGAT
ATTTTTCTTGCCAAATATGTTGACTTATTTTAAATTATTCTATAATGATGCATTAGGTCTGTGCCTTTCAAGATGTTATTTTCAGTTTGCTAGTATTTAGTGGCAAGGGAATGAAGTCCAGTGTACAGTGAAATGCTTTTTCATACACACGGTTCTCGTTGTGAGTGGTAGGTATTTTCCAACAAAAGTGACATCATTCT
CTATTTTAGTGGGTTTGTTTGTTTCATCTTGGCTGTTATAATATATTTGTTTGCCAATTTCCCATCTCTTTATGCTTTGAATACTATATCGTTAATTGCTGCTTTATTTCCATTGTTTTACAGTACCTTTCTATGACTTATTGAATGTACTCGGTAATTATGGCTCCTAAAAGTTGC