sp|Q39065|COPT1_ARATH ----> Copper transporter 1


Intron 1 GTGGGTCCGC ... TTCGAATCAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A162.5364
A2100001
A353.85343
A446.67416
A5100001
A654.72121316
A756.19233722
A87061513
A991.1122120
A1070.53143829



>TRINITY_DN43279_c0_g1_i2 from sample A10 / Example spliced isoform
ATTTCTCACCTTCTTAAAAGTACATGTTTACATGTATGTATCTAATTGGATTGTCATGTTCACCACACTTTAAATTCCAATTTAGAGTCATAATAAGAAGCTTGGAGCGTCTCAATCATGACATGTCAACATGGAGGCACAACTTCCAAACTATTGTTTTGTGTGAGGCTTCGTTGAATGTGACATTCAATTTAATTTCT
TGGAAATACAAGAAGCAGAAGGGGCAAGCGAAGTTACAAACCTGCAATTATTCAGTGTATTCTTTCTAAATATCGGTCCTCAGGTCACAGGTGAAGTTATAATTTCATATATTAATGGAGGAGTTTTGCTTTTACAAATTTTAGTATTTCCATAGATTAAGATGGAAATTTGCCTTGTTAACTCCATTTCTTTGAATCAA
TAAAGAAGAAGATCCATGTTGTAAGAAAACCTAAAGGACAGGATCCATTTTTATCATACAAGACTAGCGTTGCAAGAAAACCTAAAGGACAGGATCCATTTTTATCATACAAGAATAGCGTTGCAAGAAAACAAGAGAAATACAATGGATGGCATGCCTGTTATGTCACCAACCCACCAGTCTCTGCCAATGGAGTCCAT
GCACATGGAGATCATGAGGAGGAGCTTTTACTGGGGCAGTGATGTGGTATTCTTTTTTGCAGACTGGCCTTCAGGTCATGTGGTGATGTATATCTTGGCTCTTGCATTGCTTCTTATCATTTCTGTGTTCAATGAATATCTTTCTAATCTCAGAGGTTCTCATGGTGGGAATAAAGCTTGGGCTGGTGGATTGGTAGAGA
CTCTATGCCACACAATCCGTGTTGCCACTACCTACCTCCTCATGCTAGCGGTCATGTCTTACAACTTGGGTGTGTTTGCTGCTGTCATTGTGGGCTCTGCAATTGGTTTCTACGTATTTCGTAGACAGCATACCAGGGAAGAAGAATACTGCAACACAGATGCTTAAAGCAAACCCTAGATGGATTCGCGGAAAAATCTC
AGAAAATGTAGCAAAAGATCAAATTGTCTCTTGATAGCTGTCTGGTATCTTTCTTGCTTTACTGTTTGTGGGTATTTTGTAGAAAGATTGGGTATGTCTTTCACAGGCCTGCTTTAGTTCGAAGAAAGCGTGGAAGGATGTTCTGTATAACTATTTCTCAATACGGATGGCTGCTGTTGAACCAATCTGTGAATTTGAAT
GTTGAATTCTGTTTTCATACCCTAATAAACACTTTGCAAGGTGAGTTTTGTATAAGTGGGTTCAATTATGATAGTTGATCCATCTTATTTTAATGCTAGATTCGAATTCTGTTTCGAGTGGGGTTTCAGTTAATGCACCGAGCCCAGTATCAACACAGAACACATCATCCATGATCAGTGTAGGGTATTCTCTTCTTTTT
GTTGATGAGTACAGTAGGAAAAAGTGGGTGT


>TRINITY_DN43279_c0_g1_i1 from sample A10 / Example unspliced isoform:
ATTTCTCACCTTCTTAAAAGTACATGTTTACATGTATGTATCTAATTGGATTGTCATGTTCACCACACTTTAAATTCCAATTTAGAGTCATAATAAGAAGCTTGGAGCGTCTCAATCATGACATGTCAACATGGAGGCACAACTTCCAAACTATTGTTTTGTGTGAGGCTTCGTTGAATGTGACATTCAATTTAATTTCT
TGGAAATACAAGAAGCAGAAGGGGCAAGCGAAGTTACAAACCTGCAATTATTCAGTGTATTCTTTCTAAATATCGGTCCTCAGGTCACAGgtgggtccgcatcctcattcatcacttctgaacgtttctttattgatgaatctgcaaaaatcgcagtagagaagtaaacatttttatggaatttcttttcgaatcagGTG
AAGTTATAATTTCATATATTAATGGAGGAGTTTTGCTTTTACAAATTTTAGTATTTCCATAGATTAAGATGGAAATTTGCCTTGTTAACTCCATTTCTTTGAATCAATAAAGAAGAAGATCCATGTTGTAAGAAAACCTAAAGGACAGGATCCATTTTTATCATACAAGACTAGCGTTGCAAGAAAACCTAAAGGACAGG
ATCCATTTTTATCATACAAGAATAGCGTTGCAAGAAAACAAGAGAAATACAATGGATGGCATGCCTGTTATGTCACCAACCCACCAGTCTCTGCCAATGGAGTCCATGCACATGGAGATCATGAGGAGGAGCTTTTACTGGGGCAGTGATGTGGTATTCTTTTTTGCAGACTGGCCTTCAGGTCATGTGGTGATGTATAT
CTTGGCTCTTGCATTGCTTCTTATCATTTCTGTGTTCAATGAATATCTTTCTAATCTCAGAGGTTCTCATGGTGGGAATAAAGCTTGGGCTGGTGGATTGGTAGAGACTCTATGCCACACAATCCGTGTTGCCACTACCTACCTCCTCATGCTAGCGGTCATGTCTTACAACTTGGGTGTGTTTGCTGCTGTCATTGTGG
GCTCTGCAATTGGTTTCTACGTATTTCGTAGACAGCATACCAGGGAAGAAGAATACTGCAACACAGATGCTTAAAGCAAACCCTAGATGGATTCGCGGAAAAATCTCAGAAAATGTAGCAAAAGATCAAATTGTCTCTTGATAGCTGTCTGGTATCTTTCTTGCTTTACTGTTTGTGGGTATTTTGTAGAAAGATTGGGT
ATGTCTTTCACAGGCCTGCTTTAGTTCGAAGAAAGCGTGGAAGGATGTTCTGTATAACTATTTCTCAATACGGATGGCTGCTGTTGAACCAATCTGTGAATTTGAATGTTGAATTCTGTTTTCATACCCTAATAAACACTTTGCAAGGTGAGTTTTGTATAAGTGGGTTCAATTATGATAGTTGATCCATCTTATTTTAA
TGCTAGATTCGAATTCTGTTTCGAGTGGGGTTTCAGTTAATGCACCGAGCCCAGTATCAACACAGAACACATCATCCATGATCAGTGTAGGGTATTCTCTTCTTTTTGTTGATGAGTACAGTAGGAAAAAGTGGGTGT



Intron 2 GTGGGTCCGC ... ATCAATAAAG

SampleRetention score (%)Exon junction reads5'ss reads3'ss reads
A177.144621
A2-1000
A392.850.548
A452.385110
A5100001
A666.0881318
A771.06133724
A892.911.51524
A977.595.52117
A1070.5513.53826



>TRINITY_DN41309_c0_g1_i1 from sample A6 / Example spliced isoform
TAAGAAGCTTGGAGCGTCTCAATCATGACATGTCAACATGGAGGCACAACTTCCAAACTATTGTTTTGTGTGAGGCTTCGTTGAATGTGACATTCAATTTAATTTCTTGGAAATACAAGAAGCAGAAGGGGCAAGCGAAGTTACAAACCTGCAATTATTCAGTGTATTCTTTCTAAATATCGGTCCTCAGGTCACAGAAG
AAGATCCATGTTGTAAGAAAACCTAAAGGACAGGATCCATTTTTATCATACAAGACTAGCGTTGCAAGAAAACCTAAAGGACAGGATCCATTTTTATCATACAAGAATAGCGTTGCAAGAAAACAAGAGAAATACAATGGATGGCATGCCTGTTATGTCACCAACCCACCAGTCTCTGCCAATGGAGTCCATGCACATGG
AGATCATGAGGAGGAGCTTTTACTGGGGCAGTGATGTGGTATTCTTTTTTGCAGACTGGCCTTCAGGTCATGTGGTGATGTATATCTTGGCTCTTGCATTGCTTCTTATCATTTCTGTGTTCAATGAATATCTTTCTAATCTCAGAGGTTCTCATGGTGGGAATAAAGCTTGGGCTGGTGGATTGGTAGAGACTCTATGC
CACACAATCCGTGTTGCCACTACCTACCTCCTCATGCTAGCGGTCATGTCTTACAACTTGGGTGTGTTTGCTGCTGTCATTGTGGGCTCTGCAATTGGTTTCTACGTATTTCGTAGACAGCATACCAGGGAAGAAGAATACTGCAACACAGATGCTTAAAGCAAACCCTAGATGGATTCGCGGAAAAATCTCAGAAAATG
TAGCAAAAGATCAAATTGTCTCTTGATAGCTGTCTGGTATCTTTCTTGCTTTACTGTTTGTGGGTATTTTGTAGAAAGATTGGGTATGTCTTTCACAGGCCTGCTTTAGTTCGAAGAAAGCGTGGAAGGATGTTCTGTATAACTATTTCTCAATACGGATGGCTGCTGTTGAACCAATCTGTGAATTTGAATGTTGAATT
CTGTTTTCATACCCTAATAAACACTTTGCAAGGTGAGTTTTGCA


>TRINITY_DN41309_c0_g1_i2 from sample A6 / Example unspliced isoform:
TAAGAAGCTTGGAGCGTCTCAATCATGACATGTCAACATGGAGGCACAACTTCCAAACTATTGTTTTGTGTGAGGCTTCGTTGAATGTGACATTCAATTTAATTTCTTGGAAATACAAGAAGCAGAAGGGGCAAGCGAAGTTACAAACCTGCAATTATTCAGTGTATTCTTTCTAAATATCGGTCCTCAGGTCACAGgtg
ggtccgcatcctcattcatcacttctgaacgtttctttattgatgaatctgcaaaaatcgcagtagagaagtaaacatttttatggaatttcttttcgaatcaggtgaagttataatttcatatattaatggaggagttttgcttttacaaattttagtatttccatagattaagatggaaatttgccttgttaactcca
tttctttgaatcaataaagAAGAAGATCCATGTTGTAAGAAAACCTAAAGGACAGGATCCATTTTTATCATACAAGACTAGCGTTGCAAGAAAACCTAAAGGACAGGATCCATTTTTATCATACAAGAATAGCGTTGCAAGAAAACAAGAGAAATACAATGGATGGCATGCCTGTTATGTCACCAACCCACCAGTCTCTG
CCAATGGAGTCCATGCACATGGAGATCATGAGGAGGAGCTTTTACTGGGGCAGTGATGTGGTATTCTTTTTTGCAGACTGGCCTTCAGGTCATGTGGTGATGTATATCTTGGCTCTTGCATTGCTTCTTATCATTTCTGTGTTCAATGAATATCTTTCTAATCTCAGAGGTTCTCATGGTGGGAATAAAGCTTGGGCTGG
TGGATTGGTAGAGACTCTATGCCACACAATCCGTGTTGCCACTACCTACCTCCTCATGCTAGCGGTCATGTCTTACAACTTGGGTGTGTTTGCTGCTGTCATTGTGGGCTCTGCAATTGGTTTCTACGTATTTCGTAGACAGCATACCAGGGAAGAAGAATACTGCAACACAGATGCTTAAAGCAAACCCTAGATGGATT
CGCGGAAAAATCTCAGAAAATGTAGCAAAAGATCAAATTGTCTCTTGATAGCTGTCTGGTATCTTTCTTGCTTTACTGTTTGTGGGTATTTTGTAGAAAGATTGGGTATGTCTTTCACAGGCCTGCTTTAGTTCGAAGAAAGCGTGGAAGGATGTTCTGTATAACTATTTCTCAATACGGATGGCTGCTGTTGAACCAAT
CTGTGAATTTGAATGTTGAATTCTGTTTTCATACCCTAATAAACACTTTGCAAGGTGAGTTTTGCA