sp|Q9SQZ0|CAAT7_ARATH ----> Cationic amino acid transporter 7, chloroplastic
Intron 1 GTTAGTCTTC ... CTTTTTGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 17.77 | 398 | 104 | 68 |
| A2 | 16.52 | 240 | 64 | 31 |
| A3 | 15.57 | 377 | 101 | 38 |
| A4 | 13.21 | 220 | 44 | 23 |
| A5 | 14.5 | 224 | 44 | 32 |
| A6 | 16.12 | 1007 | 241 | 146 |
| A7 | 14.35 | 1253 | 278 | 142 |
| A8 | 14.72 | 872 | 189 | 112 |
| A9 | 15.41 | 1013 | 257 | 112 |
| A10 | 15.39 | 1160 | 307 | 115 |
>TRINITY_DN45174_c0_g8_i2 from sample A6 / Example spliced isoformAATTCCCAGCGTATATTACCGGCGCAAATCTGATAATGGAATATGTTGTTTCCAATGCTGCTGTTGCCCGAAGCTTTACTTCGTATTTCGGCTCTGCAATTGGTTTCAAGAATGTCGATAAATGGCGCTTCAAAGTGCACGGCTTACCGGAAGGCTTCAACGAGCTAGATCTTATAGCCGTCGCCCTTATTATTGTGCTT
ACAATATGTATTTGCTACAGCACGAAAGAAAGCTCGGCTGTCAATATGGTGCTAACCGTGTTGCATCTGGGATTCATCTTGTTCATCATCATAATCGGTTTTGCCAAGGGAGACGTCAAGAACTTGACACAGCCGGCCAATCCGACGAACCCGGGGGGTTTCGCACCGTATGGGGTAAATGGGGTGTTCAATGCTGCAGC
CATGGTTTACATCAGCTACATTGGGTATGATGCCGTTTCAACCATGGCGGAGGAGGTTAAATATCACGCTACAGATATCCCGATCGGGGTCTCCGGTTCTGTCATCATTGTCACCGTGCTCTACTGTCTCATGGCTACGGCTATGTGCACATTGGTCCCATATGATCTGATAAATATAAATGCCCCATTCTCAATGGCTT
TCAAAAACGATCCCAGGTGGAAATGGGTATCTAATGTAGTGGGTGCGGGGGCGAGTTTGGGGATTCTAACGTCGCTACTGGTGGCGATGCTGGGACAGGCACGTTATATGTGTGTCATTGGGCGCTCTCATGTGATACCCGACTGGTTTGCGAAAGTCAATTCCAAGACTGGCACACCCCTGAACGCATCCATCTTTCTC
GGAATCTGCACTGCGGCGATAGGGCTGTTTACCGATCCGGAAATTCTGATGGGCTTGATATCCATAGGGACGCTCTTTGTCTTTTACATGGTGGCCAATGCTCTGATCTACAAGCGCTATGTAGTCATCGGGAAGGAGACAAATCCATGGCCGACGCTTGGGTTCCTGTCGGCGCTGTCGTGCATCGCCATCGGATTTAC
TTCACTGTGGCAATTCCATAGGGGCCCATGGAGTCTTGCTATATGCGGCCTCGCGGCGATTGTTCTTACCTATGTTTTCTCGGCTGTCGTTCCAGAGGCCAAGCAGCCGCGTGAATGGGGCGTACCCTGTATGCCCTGGATAGCCGCCGCCTCTGTCTTCTTGAATGTGTTCTTGTTGGGTTCTCTGCGCAAGAGCTATT
ACTTACGATTCGCGATCTTCTCCGTAGTGGCCATAGTTTTCTATTTAGTTTACAGCGTGCATGCAAGCTACGATGCCGAATGTCGGGCGGCATCATTAGCGCTTGGCCCACCGACCGCCGTAGAAGGTCATGTTATAGAGATGAGTACAGTGCCAGCGTCAAAGATTTCAGAGCCGGCACAGATTGCGGACGTTTGAGGA
CTTAAAAAATGGTCAATTATTCAGTTGAGGGTGGCTCCAGAGTCCGGACCACTACAGGCAGGCCGTCAAGAATAATACTAATAACGCTCACTGACATAGATTGCCCTTTTTGGCATTGGGCGTTACGGTGAAAAGGGAGTACCTAAAGAGCTTGCCTAATGTATAAAATTCTAATTTGATGCGAGCATGATCGCAGGCAT
TTCATTAAAATTCAGTGTTAAGATGAAAGGACCACTTCGATTATTGTTCTGTCGACAGTTTTGATAGAGGAAAACTATAAATATTCGCAATGTATATAGGTCAAAGGCAGCTGGAATTACACTCAATAATTAGTCAGACCGAGACGTCTGTTTTACGGATAATGCAGTCATTGACGCAGAGTGATTTTATTTCGATTCCT
CTGCGCCATATCCCCAATCCAACTTTTACCTTGTTAGTTGGTACTACAGCTAGTTGTGTCGTGTAATTCTGGTGTTGGAATGTTGTTCATATTGTTATTTCTTTTCTTTTGGCGTAATTCTGGTGTTGGAATGTTGTTCATATTGTTATTTCTTTTCTTTTGGCTTGACGGACTTAATAATAACAGAAGTTCTCGTTCTA
TTTTCTTGACAGTTATTTTTTATTATCTGAAGGAGTGCACGTTCTGTGTTCATGTGGGAATCTTGATCTGTAAAACAACCCAGGAACCGTTTCGTTTCGTTTTGGTATTGGCACGACGTGGTGTGGTGGTAGTGGTAGTGGTGTCTCACACCGTAAAGAGCGGTAGCGGACAACTGACATTCTGTTATAAATAAATCGTC
GGCTGTGAAAGAACACGGCGTCCAAGACGTAGCGATAGGTTGCTTCCAAACAGCAAGTGGCATAGGCCGACACTATTCTCCGAGTTTCGTATCATATGCAATTTCACCTTAGAGGGAGGGAATTGAATGATGAATCTGGGTGAGTTAATGCCATGTGTAAAGCAATCACACTCCTTTTCCATTCTTTAATTTCTAATTAT
CTCGATAATGCTTTATTTCTTTTATGAATGACAGCGACAGCGGGTGCCATCTGTTCTTTTATGATAAAAAACATCACATTAACTCACGTAACGACCTAACTTAAATGATGAGAATATGCAGTCACTTATAAG
>TRINITY_DN45174_c0_g8_i1 from sample A6 / Example unspliced isoform:AATTCCCAGCGTATATTACCGGCGCAAATCTGATAATGGAATATGTTGTTTCCAATGCTGCTGTTGCCCGAAGCTTTACTTCGTATTTCGGCTCTGCAATTGGTTTCAAGAATGTCGATAAATGGCGCTTCAAAGTGCACGGCTTACCGGAAGGCTTCAACGAGCTAGATCTTATAGCCGTCGCCCTTATTATTGTGCTT
ACAATATGTATTTGCTACAGCACGAAAGAAAGCTCGGCTGTCAATATGGTGCTAACCGTGTTGCATCTGGGATTCATCTTGTTCATCATCATAATCGGTTTTGCCAAGGGAGACGTCAAGAACTTGACACAGCCGGCCAATCCGACGAACCCGGGGGGTTTCGCACCGTATGGGGTAAATGGGGTGTTCAATGCTGCAGC
CATGGTTTACATCAGCTACATTGGGTATGATGCCGTTTCAACCATGGCGGAGGAGGTTAAATATCACGCTACAGATATCCCGATCGGGGTCTCCGGTTCTGTCATCATTGTCACCGTGCTCTACTGTCTCATGGCTACGGCTATGTGCACATTGGTCCCATATGATCTGATAAATATAAATGCCCCATTCTCAATGGCTT
TCAAAAACGATCCCAGGTGGAAATGGGTATCTAATGTAGTGGGTGCGGGGGCGAGTTTGGGGATTCTAACGTCGCTACTGGTGGCGATGCTGGGACAGGCACGTTATATGTGTGTCATTGGGCGCTCTCATGTGATACCCGACTGGTTTGCGAAAGTCAATTCCAAGACTGGCACACCCCTGAACGCATCCATCTTTCTC
GgttagtcttcgattcttattctttatcctttcctgcctgccaatgatgattacataacaatctcactcaatccgatatgctcttacttgtgctgaccccctttcgtgtctctttttgtagGAATCTGCACTGCGGCGATAGGGCTGTTTACCGATCCGGAAATTCTGATGGGCTTGATATCCATAGGGACGCTCTTTGT
CTTTTACATGGTGGCCAATGCTCTGATCTACAAGCGCTATGTAGTCATCGGGAAGGAGACAAATCCATGGCCGACGCTTGGGTTCCTGTCGGCGCTGTCGTGCATCGCCATCGGATTTACTTCACTGTGGCAATTCCATAGGGGCCCATGGAGTCTTGCTATATGCGGCCTCGCGGCGATTGTTCTTACCTATGTTTTCT
CGGCTGTCGTTCCAGAGGCCAAGCAGCCGCGTGAATGGGGCGTACCCTGTATGCCCTGGATAGCCGCCGCCTCTGTCTTCTTGAATGTGTTCTTGTTGGGTTCTCTGCGCAAGAGCTATTACTTACGATTCGCGATCTTCTCCGTAGTGGCCATAGTTTTCTATTTAGTTTACAGCGTGCATGCAAGCTACGATGCCGAA
TGTCGGGCGGCATCATTAGCGCTTGGCCCACCGACCGCCGTAGAAGGTCATGTTATAGAGATGAGTACAGTGCCAGCGTCAAAGATTTCAGAGCCGGCACAGATTGCGGACGTTTGAGGACTTAAAAAATGGTCAATTATTCAGTTGAGGGTGGCTCCAGAGTCCGGACCACTACAGGCAGGCCGTCAAGAATAATACTA
ATAACGCTCACTGACATAGATTGCCCTTTTTGGCATTGGGCGTTACGGTGAAAAGGGAGTACCTAAAGAGCTTGCCTAATGTATAAAATTCTAATTTGATGCGAGCATGATCGCAGGCATTTCATTAAAATTCAGTGTTAAGATGAAAGGACCACTTCGATTATTGTTCTGTCGACAGTTTTGATAGAGGAAAACTATAA
ATATTCGCAATGTATATAGGTCAAAGGCAGCTGGAATTACACTCAATAATTAGTCAGACCGAGACGTCTGTTTTACGGATAATGCAGTCATTGACGCAGAGTGATTTTATTTCGATTCCTCTGCGCCATATCCCCAATCCAACTTTTACCTTGTTAGTTGGTACTACAGCTAGTTGTGTCGTGTAATTCTGGTGTTGGAA
TGTTG