NA ----> NA
Intron 1 GTGAGTATAA ... GTCATTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40.74 | 8 | 11 | 0 |
| A2 | 35.14 | 12 | 11 | 2 |
| A3 | 47.06 | 9 | 8 | 8 |
| A4 | 60 | 5 | 8 | 7 |
| A5 | 50 | 5 | 8 | 2 |
| A6 | 11.11 | 4 | 0 | 1 |
| A7 | 27.87 | 22 | 11 | 6 |
| A8 | 33.33 | 12 | 4 | 8 |
| A9 | 24 | 19 | 9 | 3 |
| A10 | 15.38 | 11 | 3 | 1 |
>TRINITY_DN115631_c1_g3_i2 from sample A2 / Example spliced isoformCTCCTCTCTTTTTGTTCGGCTTCCATGTTGTGAACGCTCTGGTAATGTTCTCTGTCATTTCAGAACCGAGACAATGTGGCAGCATGGAGTTCTATTGGAGTTCTGGAGTTCTATTGGCTAACCTGATCTTTCTTGAACCGAGACAATGTGGCAGCATGGCTAACCTGATTTGCATATGCCTTAATTCTTTCTTGGCCAAA
TAATCAATGGACAATATGACAGCATCACGTGCAGGCCAATTA
>TRINITY_DN115631_c1_g3_i1 from sample A2 / Example unspliced isoform:CTCCTCTCTTTTTGTTCGGCTTCCATGTTGTGAACGCTCTGGTAATGTTCTCTGTCATTTCAGAACCGAGACAATGTGGCAGCATGGAGTTCTATTGGAGTTCTGGAGTTCTATTGGCTAACCTGATCTTTCTTGgtgagtataattctttattgatattttggtagatccgattattattttgttgtattttaaaatgc
atttgaattcatccatagaaattgtttatgaattcatggtaatgtcaattgtttatgaatccatggtagtgtatggtactactgtattgttgattttatttaaattcacccatagaaattgtttatgaattcatgatgtcaatttctgatcgaaccttctagatagctgaaatcaccaccattttatgcatatagattta
ataaaaacatattttcattcttattatgctcttttctttcggctagctcgcccgctcctctctttgtgttcggcttccatgttgtgaacgctctggtaatgttctctgtcatttcagAACCGAGACAATGTGGCAGCATGGCTAACCTGATTTGCATATGCCTTAATTCTTTCTTGGCCAAATAATCAATGGACAATATG
ACAGCATCACGTGCAGGCCAATTA