sp|Q94AH6|CUL1_ARATH ----> Cullin-1

Intron 1 GTACGCAAAA ... TTCTTCTCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	47.76	70	13	64
A2	50	52	18	52
A3	48.65	38	7	36
A4	55.26	34	8	42
A5	58.82	14	5	20
A6	63.04	17	5	29
A7	47.9	87	5	80
A8	51.52	80	9	85
A9	44.19	72	3	57
A10	43.07	78	14	59

>TRINITY_DN45219_c0_g4_i1 from sample A6 / Example spliced isoform

TGTGGAGGCCAGTTTACTTCAAAGATGGAGGGAATGCTTACTGACTTGACTTTGGCATGGGAGAACCAACCAAACTTTCAAAAATATCTTTATGATAATGTGCATGCACATCTTGGAATATAATTGACTGTAACAGCCTTGACTACTGGATTTTGGCCCAGCTACAAGTCATTTGATCTCAATTTGCCTGCTGAGATGGG
ATCTGTATTATTGCTGTTAAATTCTGCTGAAAAATTGAACTATTCAGAAATCAAATCTCAGCTGAATTTGTCAGACAAAGATATTGTTAGATTGCTACATTCACTTTTGTGTTTAAAACACAAAGTTCTGAATAAGGAGCGAAGCAGAAAAACTGTCATACAGTCTGATCACTTCGAATTTAATGCAAAATTTACTGACA
AATCAAGAAAGATCAAGATTCCTCTTCCTCCTGTGGATTAGAAGAAGAGGATAATTGAGGACGTGGACAAAGATAGACGATATGCAATTGA

>TRINITY_DN45219_c0_g4_i4 from sample A6 / Example unspliced isoform:

TGTGGAGGCCAGTTTACTTCAAAGATGGAGGGAATGgtacgcaaaatttgtctattttttaaagtctgtaatgcttacagtttgtgtctttataatttaaaaccttgggaaataatttaatgctctttggttcatgttcttctaatccatatatttcttctcagCTTACTGACTTGACTTTGGCATGGGAGAACCAACCA
AACTTTCAAAAATATCTTTATGATAATGTGCATGCACATCTTGGAATATAATTGACTGTAACAGCCTTGACTACTGGATTTTGGCCCAGCTACAAGTCATTTGATCTCAATTTGCCTGCTGAGATGGGATCTGTATTATTGCTGTTAAATTCTGCTGAAAAATTGAACTATTCAGAAATCAAATCTCAGCTGAATTTGTC
AGACAAAGATATTGTTAGATTGCTACATTCACTTTTGTGTTTAAAACACAAAGTTCTGAATAAGGAGCGAAGCAGAAAAACTGTCATACAGTCTGATCACTTCGAATTTAATGCAAAATTTACTGACAAATCAAGAAAGATCAAGATTCCTCTTCCTCCTGTGGATTAGAAGAAGAGGATAATTGAGGACGTGGACAAAG
ATAGACGATATGCAATTGA