sp|Q7X999|RCA2_LARTR ----> Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic
Intron 1 GTTAGTTTTC ... GGGACTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 40.38 | 31 | 14 | 28 |
| A2 | 48.43 | 27.2 | 27 | 24 |
| A3 | 38.46 | 36 | 16 | 29 |
| A4 | 45.16 | 17 | 10 | 18 |
| A5 | 46.34 | 11 | 5 | 14 |
| A6 | 47.54 | 161.2 | 136 | 156 |
| A7 | 41.89 | 120 | 68 | 105 |
| A8 | 39.59 | 74 | 44 | 53 |
| A9 | 44.23 | 99 | 78 | 79 |
| A10 | 42.16 | 59 | 42 | 44 |
>TRINITY_DN112989_c0_g1_i1 from sample A1 / Example spliced isoformCTGCATTCTGATTTCATTCTATATAACATAGAGTTTTGCAGCCTGCCATAAATTCGTATTTCTGCCCAGCATCATCCGCTACACCATGGCGACTGCTGCAGCTGCTGTTGGATCCATCACTGTCTCCTCGAAGAGTCTGCCTTTGTCCAGTGGACAAGCATCAATCCTAAAGACAGTCCCTAGCACTTCATTTTTTGGGT
GTGGATTGAAGAAGACCAGCTACAATGCCTCCCGCACTTTCACAAAGGCGAATCACTTGAGAGTTGTTGCTGAAATTGATGAGACCCAGCAGACTGATAAGGACAGATGGAAAGGTCTTGCATATGATGAATCTGATGACCAACAGGATATTAGGCGTGGAAAGGGAAAGGTTGATTCCCTTTTCCAAGCTCCGATGGGG
TCTGGCACGCACAATGCCATTATGACTTCTTATGACTATATCAGTACTGCTCAGCGAATGTTTGGATTTGACAACACAATGGATGGGTACTACATTGCTCCTGCTTTTATGGACAAGCTTATTGTTCACATCTCGAAAAACTTCATGAACTTGCCTAGCATTAAGATTCCTCTCATTCTTGGTATCTGGGGAGGCAAAGG
TCAAGGAAAGTCCTTCCAATGTGAGCTTGTATTGGCAAAGCTGGGAATCAACCCAATTATGATGAGTGCTGGAGAACTGGAGAGTGGAGATGCAGGAGAGCCGGCAAAATTGATCAGACAACGATACCGTGAAGCATCTGACATCATCAAGAAAGGGAAGATGTGTGTGCTCTTCATTAATGATCTGGATGCAGGAGCTG
GAAGAATGGGTGGCACAACTCAGTACACCGTGAACAACCAGATGGTCAATGCCACCCTCATGAACATAGCTGATAACCCAACAAATGTTCAGCTGCCTGGCATGTACAACAAACAAGACAATCCTCGTGTTCCAATAATTGTGACAGGAAATGATTTCTCAACTTTGTATGCTCCATTGATTCGTGACGGGCGTATGGAG
AAGTTCTATTGGGCTCCTACTCGGGAAGACAGAATTGGAGTCTGCAAGGGTATTTTCCAAGCAGACAATGTGAGCGGTGATGACGTTGTGAGGCTTGTAGATTCCTTCCCAGGCCAGTCAATTGACTTCTTTGGTGCCTTGAGGGCTAGGGTCTATGATGACGAAGTGCGAAAGTGGGTGGCAGAAACAGGGATTGAAAA
CATTGGCAAGAAACTTGTTAACTCAAAGGCTGGCCCTCCAACATTCGCAACGCCTGCAATGACAATTGAGAAGCTTCTTGAGTATGGTAACCTGCTTGTTGCAGAGCAAGATAATGTGAAACGAGTGCAATTGGCCGATAAGTACATGGCTGAGGCTGCTCTAGGAGAAGCTAATGAGGATTCCATCAAAAGGGGAACCT
TCTATGGTCAAGCTGCTCAGCATGTGAATTTGCCTGTTCCTGAAGGCTGCACTGACCCAAGGGCAGCGAATTTCGATCCGACAGCTAGGAGTGACAATGGATCCTGTCAATATGATTTCAAGGAGCAGTAGGCATCCGATTTCTCCCCCATTCTATGCTTTTCTGAAGTAAAGACCGTATTAGGAGCAACAACTGAAGCA
GGAAAATGGTGGTAGAAGTAGGTGTAGAATTCTTTAGAGATGAACTGGACTCATATGTCTGTGCAATGTATTAACACCATATACAGACTTACTGAGCTCCTCTATTAAGTATTTAGGTTTCTCTCTTGTGTGGAATGTAATCTCTTTTGAGTAAAGAAATATCACTTGGAGTGTTTCTTCCTTAGCTCATCTTTTACTGA
AGCTCTATGTTATCTGGTAGTTAGTGAGAATATGTTTTTTCTATTTGCA
>TRINITY_DN112989_c0_g1_i4 from sample A1 / Example unspliced isoform:CTGCATTCTGATTTCATTCTATATAACATAGAGTTTTGCAGCCTGCCATAAATTCGTATTTCTGCCCAGCATCATCCGCTACACCATGGCGACTGCTGCAGCTGCTGTTGGATCCATCACTGTCTCCTCGAAGAGTCTGCCTTTGTCCAGTGGACAAGCATCAATCCTAAAGACAGTCCCTAGCACTTCATTTTTTGGGT
GTGGATTGAAGAAGACCAGCTACAATGCCTCCCGCACTTTCACAAAGGCGAATCACTTGAGAGTTGTTGCTGAAATTGATGAGACCCAGCAGACTGATAAGGACAGATGGAAAGGTCTTGCATATGATGAATCTGATGACCAACAGGATATTAGGCGTGGAAAGGGAAAGGTTGATTCCCTTTTCCAAGCTCCGATGGGG
TCTGGCACGCACAATGCCATTATGACTTCTTATGACTATATCAGTACTGCTCAGCGAATGTTTGGATTTGACAACACAATGGATGGGTACTACATTGCTCCTGCTTTTATGGACAAGCTTATTGTTCACATCTCGAAAAACTTCATGAACTTGCCTAGCATTAAGATTCCTCTCATTCTTGGTATCTGGGGAGGCAAAGG
TCAAGGAAAGTCCTTCCAATGTGAGCTTGTATTGGCAAAGCTGGGAATCAACCCAATTATGATGAGTGCTGGAGAACTGGAGAGTGGAGATGCAGGAGAGCCGGCAAAATTGATCAGACAACGATACCGTGAAGCATCTGACATCATCAAGAAAGGGAAGATGTGTGTGCTCTTCATTAATGATCTGGATGCAGGAGCTG
GAAGAATGGGTGGCACAACTCAGTACACCGTGAACAACCAGATGGTCAATGCCACCCTCATGAACATAGCTGATAACCCAACAAATGTTCAGCTGCCTGGCATGTACAACAAACAAGACAATCCTCGTGTTCCAATAATTGTGACAGGAAATGATTTCTCAACTTTGTATGCTCCATTGATTCGTGACGGGCGTATGGAG
AAGTTCTATTGGGCTCCTACTCGGGAAGACAGAATTGGAGTCTGCAAGGGTATTTTCCAAGCAGACAATGTGAGCGGTGATGACGTTGTGAGGCTTGTAGATTCCTTCCCAGGCCAGTCAATTGACTTCTTTGGTGCCTTGAGGGCTAGGGTCTATGATGACGAAGTGCGAAAGTGGGTGGCAGAAACAGGGATTGAAAA
CATTGGCAAGAAACTTGTTAACTCAAAGGCTGGCCCTCCAACATTCGCAACGCCTGCAATGACAATTGAGAAGCTTCTTGAGTATGGTAACCTGCTTGTTGCAGAGCAAGATAATGTGAAACGAGTGCAATTGGCCGATAAGTACATGGCTGAGGCTGCTCTAGGAGAAGCTAATGAGGATTCCATCAAAAGGGGAACCT
TCTATGgttagttttcttatccctgaaccacagtgggaacttacgatatatgtatgtgtgcatgaataggtagagtaagtttaggattaggattgggtggcaggaaagagggatctcctgactttgatggtggggactacagGTCAAGCTGCTCAGCATGTGAATTTGCCTGTTCCTGAAGGCTGCACTGACCCAAGGGC
AGCGAATTTCGATCCGACAGCTAGGAGTGACAATGGATCCTGTCAATATGATTTCAAGGAGCAGTAGGCATCCGATTTCTCCCCCATTCTATGCTTTTCTGAAGTAAAGACCGTATTAGGAGCAACAACTGAAGCAGGAAAATGGTGGTAGAAGTAGGTGTAGAATTCTTTAGAGATGAACTGGACTCATATGTCTGTGC
AATGTATTAACACCATATACAGACTTACTGAGCTCCTCTATTAAGTATTTAGGTTTCTCTCTTGTGTGGAATGTAATCTCTTTTGAGTAAAGAAATATCACTTGGAGTGTTTCTTCCTTAGCTCATCTTTTACTGAAGCTCTATGTTATCTGGTAGTTAGTGAGAATATGTTTTTTCTATTTGCA