sp|Q6ZJM9|EHD3_ORYSJ ----> PHD finger protein EHD3
Intron 1 GTCAGCACTT ... ATGAGCAGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 46.51 | 46 | 3 | 40 |
| A2 | 43.96 | 51 | 2 | 40 |
| A3 | 46.53 | 54 | 1 | 47 |
| A4 | 49.21 | 32 | 4 | 31 |
| A5 | 47.22 | 19 | 3 | 17 |
| A6 | 50 | 2 | 2 | 2 |
| A7 | 48.08 | 27 | 0 | 25 |
| A8 | 50 | 5 | 0 | 5 |
| A9 | 36.36 | 21 | 3 | 12 |
| A10 | 50 | 18 | 1 | 18 |
>TRINITY_DN42980_c1_g1_i11 from sample A9 / Example spliced isoformCTGGGGGAGCTCATCATCAAGTTGAACATGAAAATGGTGGAAATGCAAAAGTCAGTGGACAAAACAGTCTGTTGCATAAGCTATTTTAGCCTCGCATAGGCTATCTCTAGCCTCGTGGACATTAAAATTTCTTTCTTTCTTTCTTAACAAATGGACAAAACAGTGTGTCGCATAAGCTATTTTAGCCTGGTGGACATTAA
AATTTCTTTCTTTCTTTCTTAACAAACGGATCTATTTAGCCTGTGCCACCGCCTCCCATTTGAAATGTGTTAAGGAGCTCAAAAGTCTATGCATATTTCTTAATGCGACCCTTGAAGGTAAACCATTACACTCCGCGCTTCATTTGGATCCATTGAAAGGATTGCTACATTTACTGAACAAAACCAAATTAGTCGGAGCG
CGGTCTATGAGCAGCAGAAAGAGCCAATTCAACAACTTAAGGTTAAAGATGGGGTTTGACAGGGAGCTAAGGTCAAGTAAGAGGCACAGAGCTGAACTGATATCTTCAGATATTCCGTTGATAAACTGCCAGTTACCTGACCAAGCCACTACACATGAAGGACAACATCATTCAGAATCTGTTAAAAGGAGGATGCCTGA
TTGCAAAACAGTTGTAAGCCATTCAAATAATGATATCCAAGATGAAAGGAAGAGTTCCACCAAAAAAATATGTGGTGAAAAGTCTAAAGCTCCTTTTGGAAGGCAAAATTCTAGTACAATAAAAGGTAATCAAGGCAATGAAACTAATGGAAAGCCAGAGATCATGGAAATGAATCTTGTTAAAAAAGAAATGGGAATAG
AAAATGAAGATGCATCTGATGAACTGTCTCCTGAGCAGAAGCCATTTCCTGGTATGAAACCTCAGAAGAATAAAATGCTTGTTTCATCCCTGGAAGAGGTTTCTAATGCATCCTTTGATCATCTAAACTCTGAGAATAGTGAGGAAAAGCTGTTGAAGTATAAAATGCAATTAGATGAACTGGAAGAATTTGTAGCTAAT
CAAGGTGAAACTCTTGGACCTGGCTGGAAAGTACAAATATCTCGCAAGTTCACTTATTTCATATCACCTGACAAGAAAAGATTCAATTCAATGATATCTGTTGCAAATCACCTTACAAAAAAGAAAAGATTCAAAGGGCAAGGAAAGAAGTCAGGTAAAGAAGAACTAAATGGTGGTCTGTCCAGTGCTTCTGTTTGTTT
GAATACCAGCGGCCCCGAAGGAGAAGCTGTGCTTGGAAATTTGGCAGTGGATCGGTTTCCCAAGTGTAATGATCTGGATGCCAGACAGTCTTCAGTAGTCGGAGGTTTTAGAAGGCAGCAAGAAGAGACCACCTCTGTTATAGCAGAGCAAGGACCAAAAGTGGGTGGCAATTCGATTGTAGGGAGCTTTAATGAAACAC
AAGCAGAGCCTTTAAGTGGGTCATCTCAGCTGGGAATGGAAGACAGTAACATAGGATCTGTGCAGGGCGTTAATGGAGCACAAGCAGAGCTTTTGAGTGGATCATCTAACCTGGTATTGCAAGATGAAAACGGGGGGGACAAAAACATAGATAAAAAATCAAGCACGCTCAGTGAAAAAGATATAAATTATAATCAAATT
GCGCATTGGACTGAAGTCTTGGAACAGGTTTTAAATGCATCAAGCATAACTGCAGGAGGAATAAGGAGTGCCATTGCGAAGGCACTTGCTTCTGGGCCACCTGACTGTGCCAAGAAGTTGCTTCAACAAACCATTTCAAAGGATACTCCTAATAAGAGTGGAATTCTTCCCATGAAGGAAGCCGTTTCATCAGTGCTTGC
TTTGTATGGTGGTGGAAAGCCAAGTTATGGGAAGGCAGAAAGACAATCTTTTCTTGAAAAAATCAAGAGTATTCAGGAGAGCACCAAGATAGAGAATGACACGTCTATGAAGGAATCTGGAAGTCAAAAGGCGGTTTCTTCAAATGTGATCACTGATTGCTGTTCAGATGTCTTTCAAAAAATTATTTCATCAGAAATAT
TTGCGGTACTATGTAACTTGATCCACGGGAACTTTGCTGGGCCAAGGATGCATGAGGTGTTTGATTTTCATCTTCTTGCTTTGAGGATGAATGCTGGAACATATGGGAGCTCACCAGAGTGTTTTGCATTAGATTTGCAAGAGCTATGGAGAAAGGTACACAAGATAGGTCAAGAGATGGTTCTTCTGGCAGATAAGCTC
TCAGAGCTTTCTCAGAATATTTATGAAAAAGAGGTGGTAGGCTTGCTTGAGCGAGAAGCTGCCGAAAGTTCTGAACATGCTAGAGAAAAGACAACTGTGGATGCAAAATTACTGGATCAAGATGAACAGCCTGAGCAGATAAGTGAGCAGAATCACAGCAGTAGACAAGAAGGCACAGCAGTTCAGATTCCTGGAGTTGA
AAATCCTAATAATCAATCTATGCTTTCAAGAAATCTGATTGGTGAAGACACTGGGAGAGGAGTTGAAGATGGAGACACTGTCAACTTGAATGAGATAACCAAAGATGCAAGTAGGTCTCCATGTGAAGAAACTCAAATTCTATTGAAAGATGGGGATGATATTACAAGTCCATGCCTACAAAATCAACAGTGTGACCTTC
CTTCATCAGGCACAGATGGTAGTCTTTGCAGAGCCTGTGGTCTTGATGAGTGCACTGATCGCATTCTAATATGCGATGCCTGTGATGGAGCATATCATACATATTGCCTTTCACCTCCAATTGAAGAAATTCCAAGTGGAAGCTGGTACTGTGCTCCTTGCTTTGCAACTGGAAAGGAATCACCGGAGGTTGACTCATTT
CATGAAAGAGAGGAAAATGTGCAAGGCACAGAAAGCATTGTCTATCATTGTGTTGTTTGTGAGCGACTAAGTAAGATACAAAATAGTGAACAATACAGACAAGCAGAATCTGGAATTGGTAGGAAATTGGATGGACCAGATTCTCAAAGGGAAGAGGTAGACCTGATGGCAGTGCATGGGGCGGAACAGGAGTTGGAAGT
GTCTAATGATGAATTGGCTGATAGGAAATTATGCAAAGTCTGTTCTGTTGATAAAAAAGACAATGATTTTCTATTGGTGTGCAGTAACATCGATTGCCTTTCTAAATTTTACCACTTGACCTGCTTGAAACCACCGTTGTCAGCTTGTCCTCCACCTGGATGGTATTGTCCCTCATGTCTTTGCAGAGCTTGTCTCACAG
ATGAGAATGATGAGAGTGTTATCCTTTGTGATGGTTGTGATGAAGGTTATCATACATACTGTCTAAAACCTCCGCTTGATGAAATACCAGAGGGTAAGTGGTATTGCCCATCTTGTCAGCAGAAACAGAGACGGAAGAGAAGGAGAGGCCTGGAAACTCAAACAGACAACCCGACTCGCTCAGTGCAACCAAAGAAGACA
CCTGAGATAGTAAATCTGTCTTCTTCAGATGATGTAAGAGTGTCACAGGATTCTTCTGGGATAAATAGTGATGGCTATGTGACGCAGGACTTTACTTGTGTCCTTTCCAAGCAACCGTCTTCCACTGTGACAACTCCTCTCTCCAACAGAAGTCTTTCTGGTGTAGCAACTGAGCTACCTAAAGGTTCAAAACCAAAAGT
GGGCAAAAAAATGAAGAAGATTTGCTGAGGAACTGGGGTGTGAAAGTATTGAGGGCTTGCTTGTGTTTAAAAAATTGTACAAATAGTGATATTTATCAGTTCCAAATTCCTTAATCAATTTTGCTTTTGATCAATGAGATTTCAATTTCATTACGTTATTGATAAAATCATTAAAAATTGTGTTTGGTGGTGGCATTTGA
ATCTCACCAGCTCAAAATAAAAATTAAAAAATTCCGATGCTGTCTTTGGTAATTTCTTGCTTAGTTGATATCAGATGGGATTTATTGACATTAAAAGCTAGTTGAATAGTCGGTATATGATACATACGTCCATATACTGCTCATTGAAATGTATTAACAAGTTTATGACTAGATATTTTGGTATGCGTAAAATGGAAACA
TACTATGCCAGTTGTTTCCTTGATGTAACTATAAACATACCGTATGCATATGATTGTAAATGAGATCCTATATTGTGATGTTGAGCTTATCTAACTCGTTTGTTTCAG
>TRINITY_DN42980_c1_g1_i6 from sample A9 / Example unspliced isoform:CGCTTCATTTGGATCCATTGAAAGGATTGCTACATTTACTGAACAAAACCAAATTAGTCGGAGCGCGGTCTATGAGCAGgtcagcacttaattttgtcaccttcgtttgctttttcagttgaatttttttgcattgattttgagtaaaaggccactattgtgcattgcccttttactggtaagccgaaatatttatttgg
gttgagggttttacattcacagttattcatttggctaagtgatggccgacttgtggttctgttgatggttattgggttttgccggggagttttgtgagttttaatactgttgtggttttgggttttggattgctacatttactgaacaaaaccaaattagtcggagcgcggtctatgagcagagCAGAAAGAGCCAATTC
AACAACTTAAGGTTAAAGATGGGGTTTGACAGGGAGCTAAGGTCAAGTAAGAGGCACAGAGCTGAACTGATATCTTCAGATATTCCGTTGATAAACTGCCAGTTACCTGACCAAGCCACTACACATGAAGGACAACATCATTCAGAATCTGTTAAAAGGAGGATGCCTGATTGCAAAACAGTTGTAAGCCATTCAAATAA
TGATATCCAAGATGAAAGGAAGAGTTCCACCAAAAAAATATGTGGTGAAAAGTCTAAAGCTCCTTTTGGAAGGCAAAATTCTAGTACAATAAAAGGTAATCAAGGCAATGAAACTAATGGAAAGCCAGAGATCATGGAAATGAATCTTGTTAAAAAAGAAATGGGAATAGAAAATGAAGATGCATCTGATGAACTGTCTC
CTGAGCAGAAGCCATTTCCTGGTATGAAACCTCAGAAGAATAAAATGCTTGTTTCATCCCTGGAAGAGGTTTCTAATGCATCCTTTGATCATCTAAACTCTGAGAATAGTGAGGAAAAGCTGTTGAAGTATAAAATGCAATTAGATGAACTGGAAGAATTTGTAGCTAATCAAGGTGAAACTCTTGGACCTGGCTGGAAA
GTACAAATATCTCGCAAGTTCACTTATTTCATATCACCTGACAAGAAAAGATTCAATTCAATGATATCTGTTGCAAATCACCTTACAAAAAAGAAAAGATTCAAAGGGCAAGGAAAGAAGTCAGGTAAAGAAGAACTAAATGGTGGTCTGTCCAGTGCTTCTGTTTGTTTGAATACCAGCGGCCCCGAAGGAGAAGCTGT
GCTTGGAAATTTGGCAGTGGATCGGTTTCCCAAGTGTAATGATCTGGATGCCAGACAGTCTTCAGTAGTCGGAGGTTTTAGAAGGCAGCAAGAAGAGACCACCTCTGTTATAGCAGAGCAAGGACCAAAAGTGGGTGGCAATTCGATTGTAGGGATTGGGTTTTCTTGCAAATTTCTGTGACAGAGCTTTATGATTGATC
TATCCGCTGGAGGTCAAGACATCGAATCCCATGGACAATATAGTTTTTATTGTGCAGTTGAATGCCACAGCAGCATAAAAATGGTGTCTCTTTACGTTCTACTTTCTATGGGTCGTCAGAGGCCAATCGAACCATATGAGAGTCACTGATAGCGTCCATAAATCAAATGGGCAGGCAGACTTATCTCATGCCCTTTTTAG
GTCTGGCAGTGAGGCCCATCTCTTTTTAAGTATCGGGCTTCCCCCCTGTTCTTAGAAGTAGTGAGCTTTATCTTATTTTTTGTAATTTGGGCACAAATCATAATGTTTTTGCTATTTTTCAGAACAATGTGTGGTTTTTTAATTAAAAGGCTACATTCTGCTGTGCTGTCTTTATAACTTACAGAAAATAAATAAATGTT
TATTATGTAATGCTAAAAATTACATTCGCTGCGGCTACACCAGTGTGGTCATTTTATCAGAGGAGTCTCCATAATTTGTCCTTTCAAATTTTGCTCCACATTTTGTCTAAAAACCGGGCTCAGGAAGGGACAGCCATCTTCTAATTTCCGGATTGAAGGACCATACAGTCTGAAGAACTACTTATCCATTCCTTTCATTT
TTTATTTCAATCGAGCCTTTCTCAGCAGTTTCAGACTGCTTTGAGAAGAAAGATGGAGCCTTCGGCAGTCCTGCTACTCTTCTGTGTCATCTGATGCTCTTCCAGGGGATACCATCAAGGTAGACTGGTGGTTGCAGGGGAGGCACCTCCTTTACCACTGCTGGGTCAATGGCATCCCTGCTCCTCAGGGGGTGTAACAG
AGACATTTCAAACGTGCCAAGGACCCTCATGATCCTTTATAGGTTCCACGCAGTGTGATCAGACACAGAACCCCTGTACTAGGTGAGCTTGCGAGTTCTCGTTGGATAAGAAGCTGTCAAGTGTCCATGCTCAAAACAGATTCCTCGTTGGACAAGATGCTGTTAAATGCGCATGCTCAAAACAGACCCTGCAACGAGAA
ACAATATGTTTGTAATCTGACTGTGACACTTGTGTTCTGCAGCAGTTCTCACATTCCAGCATGATATTTTTAAGAATCTTGTTCAAATAAGCATATATGCAGATTCTAGAGATTTTACAGCCTCTACCACTGTGCTATCTTTTCTTCGAAATATTGAGGGAACTGCATCTTTCACAATTGCCACGAGTTTTAACCTTGAG
TCAGCTACCACCCCTAAATTTTCTGAAGTATAGATCATCGGATGGAGAATGGTTTCACAGTTA
Intron 2 GTAACAATCT ... AAATGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 66.67 | 1 | 2 | 0 |
| A2 | 0 | 6 | 0 | 3 |
| A3 | 0 | 1 | 0 | 3.5 |
| A4 | 16.67 | 5 | 1 | 2 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 0 | 49 | 0 | 26 |
| A7 | 4 | 24 | 1 | 12.5 |
| A8 | 9.52 | 19 | 2 | 10.5 |
| A9 | 0 | 35 | 0 | 20 |
| A10 | 7.5 | 37 | 3 | 18 |
>TRINITY_DN36744_c0_g1_i5 from sample A8 / Example spliced isoformGACAAAACAGTGTGTCGCATAAGCTATTTTAGCCTCGTGGACATTAAAATTTCTTTCTTTCTTTCTTAACAAACGGATCTATTTAGCCTGTGCCACCGCCTCCCATTTGAAATGTGTTAAGGAGCTCAAAAGTCTATGCATATTTCTTAATGCGACCCTTGAAAGTCTTTACACTCCGCGCTTCATTTGGATCCATTGAA
ACGATTTATGAGCGGATTGCTACATTTACTGAAAAAAACCGAATTAGTCGGAGCGCGGTCTATATGAGCAGCAACCAATTTTCAATGCCTTTTTAGACCTTATGTCTTCTGCAACAATGCAGACTTCACACTTGCTCTTTGTCTTCTGCATACAGTGAACAGGTGGCTTCAAAAAACTCCTACATTGGCAATCAATGCTC
TAAGAATGACCAATTACAGTTTGTGCATATATGTAGAAAGAAAAACAAGCAACTAAAAAAATGCATTTTTGCCGAGATAAATTAGAAGACAGCTTATGCCAGTTTCAAATAATGTCTATAAAGCCATAGTTACTTCAAAACTGTGCTAAGTTGGTGTGCTCTTCCAGCTATAGTTTTGCTATTTTTGTTGGTTTGTTAAC
ATAGCACATATATGCAAATAGCCTTACACGCAATATGATGTTCAAATATATGTTCCTTGCATATTTTGAATGCCTTTCTTGGCAATTTTGAAACTTTGTACATGGTGCCTCCATAACATATATCTGTATATCTAATGACATTTACATAGAAAATACAACTTTCTATTGATATTAATGTTCTTGTACAATGATTATAACAA
AATATGTTTCTTCTTTGCTATTTAATAATA
>TRINITY_DN36744_c0_g1_i3 from sample A8 / Example unspliced isoform:GACAAAACAGTGTGTCGCATAAGCTATTTTAGCCTCGTGGACATTAAAATTTCTTTCTTTCTTTCTTAACAAACGGATCTATTTAGCCTGTGCCACCGCCTCCCATTTGAAATGTGTTAAGGAGCTCAAAAGTCTATGCATATTTCTTAATGCGACCCTTGAAAGTCTTTACACTCCGCGCTTCATTTGGATCCATTGAA
ACGATTTATGAGCGGATTGCTACATTTACTGAAAAAAACCGAATTAGTCGGAGCGCGGTCTATATGAGCAGCAACCAATTTTCAATGCCTTTTTAGACCTTATGTCTTCTGCAACAATGCAGACTTCACACTTGCTCTTTGTCTTCTGCATACAGTgtaacaatctggaccatgtgcttttgtatttactattagtatgt
tgttgttgctaaatactccatatgatcaattctgttatttacaattttgcaaatacttttattcttgtcattttgctcattcatttgactatcgtctgtacaaaatgtgcagGAACAGGTGGCTTCAAAAAACTCCTACATTGGCAATCAATGCTCTAAGAATGACCAATTACAGTTTGTGCATATATGTAGAAAGAAAA
ACAAGCAACTAAAAAAATGCATTTTTGCCGAGATAAATTAGAAGACAGCTTATGCCAGTTTCAAATAATGTCTATAAAGCCATAGTTACTTCAAAACTGTGCTAAGTTGGTGTGCTCTTCCAGCTATAGTTTTGCTATTTTTGTTGGTTTGTTAACATAGCACATATATGCAAATAGCCTTACACGCAATATGATGTTCA
AATATATGTTCCTTGCATATTTTGAATGCCTTTCTTGGCAATTTTGAAACTTTGTACATGGTGCCTCCATAACATATATCTGTATATCTAATGACATTTACATAGAAAATACAACTTTCTATTGATATTAATGTTCTTGTACAATGATTATAACAAAATATGTTTCTTCTTTGCTATTTAATAATA
Intron 3 GTAAACAAAT ... TTTAATACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 22.03 | 46 | 8 | 18 |
| A2 | 18.92 | 30 | 5 | 9 |
| A3 | 31.15 | 21 | 10 | 9 |
| A4 | 17.24 | 24 | 7 | 3 |
| A5 | 20 | 8 | 2 | 2 |
| A6 | 23.08 | 10 | 4 | 2 |
| A7 | 25.58 | 32 | 7 | 15 |
| A8 | 16.67 | 10 | 3 | 1 |
| A9 | 19.15 | 19 | 1 | 8 |
| A10 | 20.69 | 23 | 4 | 8 |
>TRINITY_DN120560_c2_g2_i12 from sample A3 / Example spliced isoformAATACATTAACAAACGGATCTATTTAGACTGTGCCACCGCCTCCCATTTGAAATGTGTTACGGACCTCAAAAGTCTATACATATTTCTTAATGCGACCCTTGAAGGTAAACCATTACACTCCGCGCTTCATTTGGATCCATTGAAAGGATTGCTACATTTACTGAACAAAACCAAATTAGTCGGAGCGCGGTCTATGAGC
AGCAGAAAGAGCCAATTCAACAACTTAAGGTTAAAGATAGGGTTTGACAGGGAGCTAAGGTCGAGTAAGAGGCACAGAGCTGAACTGATATCTTCAGATATTCCGTTGATAAACTGCCAGTTACCTGACCAAGCCACTACACATGAAGGACAACATCATTCAGGATCTGTTAAAAGGAGGATGCCTGATTGCAAAACAGT
TGTAAGCCATTCAAATAATGATATCCAAGATGAAAGGAAGAGTTCCACCAGAAAAATATGTGGTGAAAAGTCTAAAGCTCCTTTTGGAAGGAAAAATTCTAGTACAATAAAAGGTAATCAAGGGAATGAAACTAATGGAAAGTCAGAGATCATGGAAATGAATCTTGTTAAAAAAGAAATGGGAATAGAAAATGAAGATG
CATCTGATGAACTGTCTCCTGAGCAGAAGCCATTTCCTGGTATGAAACCTCAGAAGAATAAAATGCTTGTTTCATCCCTGGAAGAGGTTTCTAATGCATCCTTTGATCATCTAAACTCTGAGAATAGTGAGGAAAAGCTGTTGAAGTATAAAATGCAATTAGATGAACTGGAAGAATTTGTAGCTAATCAAGGTGAAACT
CTTGGACCTGGCTGGAAAGTACAAATATCTCGCAAGTTCACTTATTTCATATCACCTGACAAGAAAAGATTCAATTCAATGATATCTGTTGCAAATCACCTTACAAAAAAGAAAAGATTCAAAGGGCAAGGAAAGAAGTCAGGTAAAGAAGAACTAAATGGTGGTCTGTCCAGTGCTTCTGTTTGTTTGAATACCAGCGG
CCCCGAAGGAGAAGCTGTGCTTGGAAATTTGGCAGTGGATCGGTTTCCCAAGTGTAATGATCTGGATGCCAGACAGTCTTCAGTAGTCGGAGGTTTTAGAAGGCAGCAAGAAGAGACCACCTCTGTTATAGCAGAGCAAGGACCAAAAGTGGGTGGCAATTCGATTGTAGGGAGCTTTAATGAAACACAAGCAGAGCCTT
TAAGTGGGTCATCTCAGCTGGGAATGGAAGACAGTAACATAGGATCTGTGCAGGGCGTTAATGGAGCACAAGCAGAGCTTTTGAGTGGATCATCTAACCTGGTATTGCAAGATGAAAACGGGGGGGACAAAAACATAGATAAAAAATCAAGCACGCTCAGTGAAAAAGATATAAATTATAATCAAATTGCGCATTGGACT
GAAGTCTTGGAACAGGTTTTAAATGCATCAAGCATAACTGCAGGAGGAATAAGGAGTGCCATTGCGAAGGCACTTGCTTCTGGGCCACCTGACTGTGCCAAGAAGTTGCTTCAACAAACCATTTCAAAGGATACTCCTAATAAGAGTGGAATTCTTCCCATGAAGGAAGCCGTTTCATCAGTGCTTGCTTTGTATGGTGG
TGGAAAGCCAAGTTATGGGAAGGCAGAAAGACAATCTTTTCTTGAAAAAATCAAGAGTATTCAGGAGAGCACCAAGATAGAGAATGACACGTCTATGAAGGAATCTGGAAGTCAAAAGGCGGTTTCTTCAAATGTGATCACTGATTGCTGTTCAGATGTCTTTCAAAAAATTATTTCATCAGAAATATTTGCGGTACTAT
GTAACTTGATCCACGGGAACTTTGCTGGGCCAAGGATGCATGAGGTGTTTGATTTTCATCTTCTTGCTTTGAGGATGAATGCTGGAACATATGGGAGCTCACCAGAGTGTTTTGCATTAGATTTGCAAGAGCTATGGAGAAAGGTACACAAGATAGGTCAAGAGATGGTTCTTCTGGCAGATAAGCTCTCAGAGCTTTCT
CAGAATATTTATGAAAAAGAGGTGGTAGGCTTGCTTGAGCGAGAAGCTGCCGAAAGTTCTGAACATGCTAGAGAAAAGACAACTGTGGATGCAAAATTACTGGATCAAGATGAACAGCCTGAGCAGATAAGTGAGCAGAATCACAGCAGTAGACAAGAAGGCACAGCAGTTCAGATTCCTGGAGTTGAAAATCCTAATAA
TCAATCTATGCTTTCAAGAAATCTGATTGGTGAAGACACTGGGAGAGGAGTTGAAGATGGAGACACTGTCAACTTGAATGAGATAACCAAAGATGCAAGTAGGTCTCCATGTGAAGAAACTCAAATTCTATTGAAAGATGGGGATGATATTACAAGTCCATGCCTACAAAATCAACAGTGTGACCTTCCTTCATCAGGCA
CAGATGGTAGTCTTTGCAGAGCCTGTGGTCTTGATGAGTGCACTGATCGCATTCTAATATGCGATGCCTGTGATGGAGCATATCATACATATTGCCTTTCACCTCCAATTGAAGAAATTCCAAGTGGAAGCTGGTACTGTGCTCCTTGCTTTGCAACTGGAAAGGAATCACCGGAGGTTGACTCATTTCATGAAAGAGAG
GAAAATGTGCAAGGCACAGAAAGCATTGTCTATCATTGTGTTGTTTGTGAGCGACTAAGTAAGATACAAAATAGTGAACAATACAGACAAGCAGAATCTGGAATTGGTAGGAAATTGGATGGACCAGATTCTCAAAGGGAAGAGGTAGACCTGATGGCAGTGCATGGGGCGGAACAGGAGTTGGAAGTGTCTAATGATGA
ATTGGCTGATAGGAAATTATGCAAAGTCTGTTCTGTTGATAAAAAAGACAATGATTTTCTATTGGTGTGCAGTAACATCGATTGCCTTTCTAAATTTTACCACTTGACCTGCTTGAAACCACCGTTGTCAGCTTGTCCTCCACCTGGATGGTATTGTCCCTCATGTCTTTGCAGAGCTTGTCTCACAGATGAGAATGATG
AGAGTGTTATCCTTTGTGATGGTTGTGATGAAGGTTATCATACATACTGTCTAAAACCTCCGCTTGATGAAATACCAGAGGGTAAGTGGTATTGCCCATCTTGTCAGCAGAAACAGAGACGGAAGAGAAGGAGAGGCCTGGAAACTCAAACAGACAACCCGACTCGCTCAGTGCAACCAAAGAAGACACCTGAGATAGTA
AATCTGTCTTCTTCAGATGATGTAAGAGTGTCACAGGATTCTTCTGGGATAAATAGTGATGGCTATGTGACGCAGGACTTTACTTGTGTCCTTTCCAAGCAACCGTCTTCCACTGTGACAACTCCTCTCTCCAACAGAAGTCTTTCTGGTGTAGCAACTGAGCTACCTAAAGGTTCAAAACCAAAAGTGGGCAAAAAAAT
GAAGAAGATTTGCTGAGGAACTGGGGTGTGAAAGTATTGAGGGCTTGCTTGTGTTTAAAAAATTGTACAAATAGTGATATTTATCAGTTCCAAATTCCTTAATCAATTTTGCTTTTGATCAATGAGATTTCAATTTCATTACGTTATTGATAAAATCATTAAAAATTGTGTTTGGTGGTGGCATTTGAATCTCACCAGCT
CAAAATAAAAATTAAAAAATTCCGATGCTGTCTTTGGTAATTTCTTGCTTAGTTGATATCAGATGGGATTTATTGACATTAAAAGCTAGTTGAATAGTCGGTATATGATACATACGTCCATATACTGCTCATTGAAATGTATTAACAAG
>TRINITY_DN120560_c2_g2_i11 from sample A3 / Example unspliced isoform:AATACATTAACAAACGGATCTATTTAGACTGTGCCACCGCCTCCCATTTGAAATGTGTTACGGACCTCAAAAGTCTATACATATTTCTTAATGCGACCCTTGAAGGTAAACCATTACACTCCGCGCTTCATTTGGATCCATTGAAAGGATTGCTACATTTACTGAACAAAACCAAATTAGTCGGAGCGCGGTCTATGAGC
AGCAGAAAGAGCCAATTCAACAACTTAAGGTTAAAGATAGGGTTTGACAGGGAGCTAAGGTCGAGTAAGAGGCACAGAGCTGAACTGATATCTTCAGATATTCCGTTGATAAACTGCCAGTTACCTGACCAAGCCACTACACATGAAGGACAACATCATTCAGGATCTGTTAAAAGGAGGATGCCTGATTGCAAAACAGT
TGTAAGCCATTCAAATAATGATATCCAAGATGAAAGGAAGAGTTCCACCAGAAAAATATGTGGTGAAAAGTCTAAAGCTCCTTTTGGAAGGAAAAATTCTAGTACAATAAAAGGTAATCAAGGGAATGAAACTAATGGAAAGTCAGAGATCATGGAAATGAATCTTGTTAAAAAAGAAATGGGAATAGAAAATGAAGATG
CATCTGATGAACTGTCTCCTGAGCAGAAGCCATTTCCTGGTATGAAACCTCAGAAGAATAAAATGCTTGTTTCATCCCTGGAAGAGGTTTCTAATGCATCCTTTGATCATCTAAACTCTGAGAATAGTGAGGAAAAGCTGTTGAAGTATAAAATGCAATTAGATGAACTGGAAGAATTTGTAGCTAATCAAGGTGAAACT
CTTGGACCTGGCTGGAAAGTACAAATATCTCGCAAGTTCACTTATTTCATATCACCTGACAAGAAAAGATTCAATTCAATGATATCTGTTGCAAATCACCTTACAAAAAAGAAAAGATTCAAAGGGCAAGGAAAGAAGTCAGGTAAAGAAGAACTAAATGGTGGTCTGTCCAGTGCTTCTGTTTGTTTGAATACCAGCGG
CCCCGAAGGAGAAGCTGTGCTTGGAAATTTGGCAGTGGATCGGTTTCCCAAGTGTAATGATCTGGATGCCAGACAGTCTTCAGTAGTCGGAGGTTTTAGAAGGCAGCAAGAAGAGACCACCTCTGTTATAGCAGAGCAAGGACCAAAAGTGGGTGGCAATTCGATTGTAGGGAGCTTTAATGAAACACAAGCAGAGCCTT
TAAGTGGGTCATCTCAGCTGGGAATGGAAGACAGTAACATAGGATCTGTGCAGGGCGTTAATGGAGCACAAGCAGAGCTTTTGAGTGGATCATCTAACCTGGTATTGCAAGATGAAAACGGGGGGGACAAAAACATAGATAAAAAATCAAGCACGCTCAGTGAAAAAGATATAAATTATAATCAAATTGCGCATTGGACT
GAAGTCTTGGAACAGGTTTTAAATGCATCAAGCATAACTGCAGGAGGAATAAGGAGTGCCATTGCGAAGGCACTTGCTTCTGGGCCACCTGACTGTGCCAAGAAGTTGCTTCAACAAACCATTTCAAAGGATACTCCTAATAAGAGTGGAATTCTTCCCATGAAGgtaaacaaattatttagctgcattgcctgagtctg
gtaacatcatgtttggaagtgccatttttcttattgttaactaaaatttaatacagGAAGCCGTTTCATCAGTGCTTGCTTTGTATGGTGGTGGAAAGCCAAGTTATGGGAAGGCAGAAAGACAATCTTTTCTTGAAAAAATCAAGAGTATTCAGGAGAGCACCAAGATAGAGAATGACACGTCTATGAAGGAATCTGGA
AGTCAAAAGGCGGTTTCTTCAAATGTGATCACTGATTGCTGTTCAGATGTCTTTCAAAAAATTATTTCATCAGAAATATTTGCGGTACTATGTAACTTGATCCACGGGAACTTTGCTGGGCCAAGGATGCATGAGGTGTTTGATTTTCATCTTCTTGCTTTGAGGATGAATGCTGGAACATATGGGAGCTCACCAGAGTG
TTTTGCATTAGATTTGCAAGAGCTATGGAGAAAGGTACACAAGATAGGTCAAGAGATGGTTCTTCTGGCAGATAAGCTCTCAGAGCTTTCTCAGAATATTTATGAAAAAGAGGTGGTAGGCTTGCTTGAGCGAGAAGCTGCCGAAAGTTCTGAACATGCTAGAGAAAAGACAACTGTGGATGCAAAATTACTGGATCAAG
ATGAACAGCCTGAGCAGATAAGTGAGCAGAATCACAGCAGTAGACAAGAAGGCACAGCAGTTCAGATTCCTGGAGTTGAAAATCCTAATAATCAATCTATGCTTTCAAGAAATCTGATTGGTGAAGACACTGGGAGAGGAGTTGAAGATGGAGACACTGTCAACTTGAATGAGATAACCAAAGATGCAAGTAGGTCTCCA
TGTGAAGAAACTCAAATTCTATTGAAAGATGGGGATGATATTACAAGTCCATGCCTACAAAATCAACAGTGTGACCTTCCTTCATCAGGCACAGATGGTAGTCTTTGCAGAGCCTGTGGTCTTGATGAGTGCACTGATCGCATTCTAATATGCGATGCCTGTGATGGAGCATATCATACATATTGCCTTTCACCTCCAAT
TGAAGAAATTCCAAGTGGAAGCTGGTACTGTGCTCCTTGCTTTGCAACTGGAAAGGAATCACCGGAGGTTGACTCATTTCATGAAAGAGAGGAAAATGTGCAAGGCACAGAAAGCATTGTCTATCATTGTGTTGTTTGTGAGCGACTAAGTAAGATACAAAATAGTGAACAATACAGACAAGCAGAATCTGGAATTGGTA
GGAAATTGGATGGACCAGATTCTCAAAGGGAAGAGGTAGACCTGATGGCAGTGCATGGGGCGGAACAGGAGTTGGAAGTGTCTAATGATGAATTGGCTGATAGGAAATTATGCAAAGTCTGTTCTGTTGATAAAAAAGACAATGATTTTCTATTGGTGTGCAGTAACATCGATTGCCTTTCTAAATTTTACCACTTGACC
TGCTTGAAACCACCGTTGTCAGCTTGTCCTCCACCTGGATGGTATTGTCCCTCATGTCTTTGCAGAGCTTGTCTCACAGATGAGAATGATGAGAGTGTTATCCTTTGTGATGGTTGTGATGAAGGTTATCATACATACTGTCTAAAACCTCCGCTTGATGAAATACCAGAGGGTAAGTGGTATTGCCCATCTTGTCAGCA
GAAACAGAGACGGAAGAGAAGGAGAGGCCTGGAAACTCAAACAGACAACCCGACTCGCTCAGTGCAACCAAAGAAGACACCTGAGATAGTAAATCTGTCTTCTTCAGATGATGTAAGAGTGTCACAGGATTCTTCTGGGATAAATAGTGATGGCTATGTGACGCAGGACTTTACTTGTGTCCTTTCCAAGCAACCGTCTT
CCACTGTGACAACTCCTCTCTCCAACAGAAGTCTTTCTGGTGTAGCAACTGAGCTACCTAAAGGTTCAAAACCAAAAGTGGGCAAAAAAATGAAGAAGATTTGCTGAGGAACTGGGGTGTGAAAGTATTGAGGGCTTGCTTGTGTTTAAAAAATTGTACAAATAGTGATATTTATCAGTTCCAAATTCCTTAATCAATTT
TGCTTTTGATCAATGAGATTTCAATTTCATTACGTTATTGATAAAATCATTAAAAATTGTGTTTGGTGGTGGCATTTGAATCTCACCAGCTCAAAATAAAAATTAAAAAATTCCGATGCTGTCTTTGGTAATTTCTTGCTTAGTTGATATCAGATGGGATTTATTGACATTAAAAGCTAGTTGAATAGTCGGTATATGAT
ACATACGTCCATATACTGCTCATTGAAATGTATTAACAAG