sp|Q9C7Y2|MORF5_ARATH ----> Multiple organellar RNA editing factor 5, chloroplastic/mitochondrial
Intron 1 GTTGGACTTT ... TTGCATTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 26.83 | 15 | 9 | 2 |
| A2 | 34.88 | 14 | 3 | 12 |
| A3 | 24.49 | 37 | 2 | 22 |
| A4 | 32.31 | 22 | 0 | 21 |
| A5 | 26.83 | 15 | 3 | 8 |
| A6 | 23.1 | 223 | 43 | 91 |
| A7 | 20.56 | 114 | 24 | 35 |
| A8 | 21.76 | 151 | 32 | 52 |
| A9 | 18.91 | 178 | 20 | 63 |
| A10 | 17.24 | 132 | 24 | 31 |
>TRINITY_DN33371_c0_g1_i1 from sample A8 / Example spliced isoformCTTGAAACATAACCATTGCAAGAATTTGCTAACTAACTAATTTTATAACCTTGAACCCATTCTATTTACAATCCTAAGTTGTGTGGGATATTGAAAACCCTTGCAGGGTTTTAGTCCCCAATGGCAGCATTGCGCAGACATGCCCTGCGTTCTCTTCGAAATTTGTCCACGCAACCCGCAAGACGCCCACCGATCTCATC
GTCTGTTTTTGACAGAGCTGCAGTCGTCAGCCACGGCGTCCACTCCATCCTTCCGCATGATTCGAACCGCATATCGGCTCGGTGGAGGGTCTCAAACTCAAATGCTGGATCGAACTACTCACCGTTGGCCAACGGGGCTCCCAACTGGAGCGACAGGCCACCTACAGAGATGGCACCGTTGTTCCCTGGCTGTGACTATG
AGCACTGGCTCGTTGTAATGGATGCCCCCGGAGATGGCAAAGCAACCAAAGAGGAAATGCATGACTGTTATGTGAAAACCCTCGCTACCGTCTTGGGAAGCGAAGAGGCGGCCATTAAATCCATTTATAATGTCTCTACAGAACGGTATTATGGGTTTGGATGCCAGATTTCGGAGGAAACTTCTTACAAGATTAAAGGG
TTGCCTGGAGTCTGTTTTGTACTTCCAGATTCATATGTTGACCCTACTAATAAGGATTATGGAGGGGAATTATTTGTTGATGGCAAAGTAGTACAGAGGCCTCCTGAAAGACAGCGTTTGATTGATGCTGCCACACAACGAAGCAATGACAGGCCTAGGTATAACGACAGGTCTCGATATGCTCGCCGAAGAGAGAATCA
AGGTCGATGAGGAACATCATTCTCTCCGAAGGTTTCAAGCTGAATTCTTCTAAAAAATTTATACATATGAAAATAATCTTGCATACTGTTGATGTACTTGGTCTTCAGCAAATTGGTTCTACAGGCCTATGAAAAATCCATCTGAGTACTGGTGTGACTTTATATAGTCATATACCTTTAGACATGATGTTTATGCCTTT
TAAGAAGACTTTGCTGATGGACTTTATATTATTTTATGAGTTTTGGATCTTTATTGCTGCATTTTCACATGTGGAGAACATTGTAAATATTCATTAGTGAGAAAATGTTCAGAAGCATGGCATAGTAAAAAAACATTTAGTTCCTTGTGATGCGTATTATTATCATCAAATGGATTTTTCATCAGACATGCTCTTCATCA
TAGAGACATTTATTAGCAGGA
>TRINITY_DN33371_c0_g1_i2 from sample A8 / Example unspliced isoform:CTTGAAACATAACCATTGCAAGAATTTGCTAACTAACTAATTTTATAACCTTGAACCCATTCTATTTACAATCCTAAGTTGTGTGGGATATTGAAAACCCTTGCAGGGTTTTAGTCCCCAATGGCAGCATTGCGCAGACATGCCCTGCGTTCTCTTCGAAATTTGTCCACGCAACCCGCAAGACGCCCACCGATCTCATC
GTCTGTTTTTGACAGAGCTGCAGTCGTCAGCCACGGCGTCCACTCCATCCTTCCGCATGATTCGAACCGCATATCGGCTCGGTGGAGGGTCTCAAACTCAAATGCTGGATCGAACTACTCACCGTTGGCCAACGGGGCTCCCAACTGGAGCGACAGGCCACCTACAGAGATGGCACCGTTGTTCCCTGGCTGTGACTATG
AGCACTGGCTCGTTGTAATGGATGCCCCCGGAGATGGCAAAGCAACCAAAGAGGAAATGCATGACTGTTATGTGAAAACCCTCGCTACCGTCTTGGGAAGCGAAGAGGCGGCCATTAAATCCATTTATAATGTCTCTACAGAACGGTATTATGGGTTTGGATGCCAGATTTCGGAGGAAACTTCTTACAAGATTAAAGGG
TTGCCTGGAGTCTGTTTTGTACTTCCAGATTCATATGTTGACCCTACTAATAAGGATTATGGAGgttggactttgaactccaatgtttcttctttttgcttatgcgggaatatagcttctcgaagtattaggaaaaaatgtgtgtttaattgaagatatgcttactttttattgttctgatatgacctttagatgtgata
gaaagttttctttgcatttagGGGAATTATTTGTTGATGGCAAAGTAGTACAGAGGCCTCCTGAAAGACAGCGTTTGATTGATGCTGCCACACAACGAAGCAATGACAGGCCTAGGTATAACGACAGGTCTCGATATGCTCGCCGAAGAGAGAATCAAGGTCGATGAGGAACATCATTCTCTCCGAAGGTTTCAAGCTGA
ATTCTTCTAAAAAATTTATACATATGAAAATAATCTTGCATACTGTTGATGTACTTGGTCTTCAGCAAATTGGTTCTACAGGCCTATGAAAAATCCATCTGAGTACTGGTGTGACTTTATATAGTCATATACCTTTAGACATGATGTTTATGCCTTTTAAGAAGACTTTGCTGATGGACTTTATATTATTTTATGAGTTT
TGGATCTTTATTGCTGCATTTTCACATGTGGAGAACATTGTAAATATTCATTAGTGAGAAAATGTTCAGAAGCATGGCATAGTAAAAAAACATTTAGTTCCTTGTGATGCGTATTATTATCATCAAATGGATTTTTCATCAGACATGCTCTTCATCATAGAGACATTTATTAGCAGGA
Intron 2 GTAAGACGCA ... GTTGATGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 23.26 | 33 | 9 | 11 |
| A2 | 31.34 | 23 | 18 | 3 |
| A3 | 32.58 | 30 | 17 | 12 |
| A4 | 42.86 | 18 | 15 | 12 |
| A5 | 25 | 12 | 4 | 4 |
| A6 | 22.77 | 313 | 107.5 | 77 |
| A7 | 23.29 | 191 | 66 | 50 |
| A8 | 21.64 | 239 | 45 | 87 |
| A9 | 22.73 | 215 | 70.5 | 56 |
| A10 | 17.93 | 103 | 28 | 17 |
>TRINITY_DN96107_c0_g1_i1 from sample A3 / Example spliced isoformATTCTATTTACAATCCTAAGTTGTGTGGGATATTGAAAACCCTTGCAGGGTTTTAGTCCCCAATGGCAGCATTGCGCAGACATGCCCTGCGTTCTCTTCGAAATTTGTCCACGCAACCCGCAAGACGCCCACCGATCTCATCGTCTGTTTTTGACAGAGCTGCAGTCGTCAGCCACGGCGTCCACTCCATCCTTCCGCAT
GATTCGAACCGCATATCGGCTCGGTGGAGGGTCTCAAACTCAAATGCTGGATCGAACTACTCACCGTTGGCCAACGGGGCTCCCAACTGGAGCGACAGGCCACCTACAGAGATGGCACCGTTGTTCCCTGGCTGTGACTATGAGCACTGGCTCGTTGTAATGGATGCCCCCGGAGATGGCAAAGCAACCAAAGAGGAAAT
GCATGACTGTTATGTGAAAACCCTCGCTACCGTCTTGGGAAGCGAAGAGGCGGCCATTAAATCCATTTATAATGTCTCTACAGAACGGTATTATGGGTTTGGATGCCAGATTTCGGAGGAAACTTCTTACAAGATTAAAGGGTTGCCTGGAGTCTGTTTTGTACTTCCAGATTCATATGTTGACCCTACTAATAAGGATT
ATGGAGGGGAATTATTTGTTGATGGCAAAGTAGTACAGAGGCCTCCTGAAAGACAGCGTTTGATTGATGCTGCCACACAACGAAGCAATGACAGGCCTAGGTATAACGACAGGTCTCGATATGCTCGCCGAAGAGAGAATCAAGGTCGATGAGGAACATCATTCTCTCCGAAGGTTTCAAGCTGAATTCTTCTAAAAAAT
TTATACATATGAAAATAATCTTGCATACTGTTGATGTACTTGGTCTTCAGCAAATTGGTTCTACAGGCCTATGAAAAATCCATCTGAGTACTGGTGTGACTTTATATAGTCATATACCTTTAGACATGATGTTTATGCCTTTTAAGAAGACTTTGCTGATGGACTTTATATTATTTTATGAGTTTTGGATCTTTATTGCT
GCATTTTCACATGTGGAGAACATTGTAAATATTCATTAGTGAGAAAATGTTCAGAAGCATGGCATAGTAAAAAAACATTTAGTTCC
>TRINITY_DN96107_c0_g1_i2 from sample A3 / Example unspliced isoform:ATTCTATTTACAATCCTAAGTTGTGTGGGATATTGAAAACCCTTGCAGGGTTTTAGTCCCCAATGGCAGCATTGCGCAGACATGCCCTGCGTTCTCTTCGAAATTTGTCCACGCAACCCGCAAGACGCCCACCGATCTCATCGTCTGTTTTTGACAGAGCTGCAGTCGTCAGCCACGGCGTCCACTCCATCCTTCCGCAT
GATTCGAACCGCATATCGGCTCGGTGGAGGGTCTCAAACTCAAATGCTGGATCGAACTACTCACCGTTGGCCAACGGGGCTCCCAACTGGAGCGACAGGCCACCTACAGAGATGGCACCGTTGTTCCCTGGCTGTGACTATGAGCACTGGCTCGTTGTAATGGATGCCCCCGGAGATGGCAAAGCAACCAAAGAGGAAAT
GCATGACTGTTATGTGAAAACCCTCGCTACCGTCTTGGGAAGCGAAGAGGCGGCCATTAAATCCATTTATAATGTCTCTACAGAACGGTATTATGGGTTTGGATGCCAGATTTCGGAGGAAACTTCTTACAAGATTAAAGGGTTGCCTGGAGTCTGTTTTGTACTTCCAGATTCATATGTTGACCCTACTAATAAGGATT
ATGGAGGGGAATTATTTGTTGATGGCAAAGTAGTACAGAGGCCTCCTGAAAGACAGCGTTTGATTGATGCTGCCACACAACGAAGCAATGACAGGCCTAGGTATAACGACAGGTCTCGATATGCTCGCCGAAGAGAGAATCAAGgtaagacgcagcaatcttattgttggggtttttctttggagataaattgagttatt
aacaataattattgttgatgtagGTCGATGAGGAACATCATTCTCTCCGAAGGTTTCAAGCTGAATTCTTCTAAAAAATTTATACATATGAAAATAATCTTGCATACTGTTGATGTACTTGGTCTTCAGCAAATTGGTTCTACAGGCCTATGAAAAATCCATCTGAGTACTGGTGTGACTTTATATAGTCATATACCTTT
AGACATGATGTTTATGCCTTTTAAGAAGACTTTGCTGATGGACTTTATATTATTTTATGAGTTTTGGATCTTTATTGCTGCATTTTCACATGTGGAGAACATTGTAAATATTCATTAGTGAGAAAATGTTCAGAAGCATGGCATAGTAAAAAAACATTTAGTTCC