sp|P10978|POLX_TOBAC ----> Retrovirus-related Pol polyprotein from transposon TNT 1-94

Intron 1 GTAAGTTCTC ... TTGGTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	100	0	1	1
A2	100	0	1	1
A3	-1	0	0	0
A4	-1	0	0	0
A5	-1	0	0	0
A6	40	9	0	6
A7	7.14	13	4	1
A8	44.44	15	4	12
A9	46.43	30	6	26
A10	53.33	14	4	16

>TRINITY_DN45282_c0_g2_i6 from sample A10 / Example spliced isoform

CACTGAGTTGCCTGCCCGACCACTGATACCGTGTTCCACAAGCGTATCGTTCGAGTTTTGGGAAGAAATCTCCTTACGTTTACATAAATGCTCATTTTGTTCCTTTCATATCTGCTCTTCTGCAACTAGAGTTCTTCGTACGGCAAGCCCCTATAAATAAAACCCTCAGTTCTCAATCTCATTTAAAGGTGGCCAGTTTT
TAACCAGGGATTCGATCCCCCGACATCATTATAGGAGCAGCGGATGTCTTGCCGACAGTGGAGTTGGATCTGAAGAGGATGGGACCAGAATCTTGGAACAAACCAAATGATGATGCCGGAATATATCGATTTACAATTTTGAAGAAGAAATGGTGGAAGGCTGTAGATCCGCCCTTCAAACGATTTCTCTGGTCCATGCT
CGCCCTTCTAAAGCCAGTGTTCTACGCATGGCAGGCCCCTCTGTGCAAAACCCCCATTTCTCAATCCATGTCATAGGTCTATACATATTTAGATGGGCTGCATTAGCATGGCAGTGTTTTCCTCAGGGGTGATTGAAGCTATGCTTTTTTTAAGAAATCTTTCTTGATTTATCTCTTAACCACAATGTGCTTGACCGGTA
GTGGAAAATTATATTAAAATTCTACAAATAGAAGAATCAATCTTAGACAGTTTCTTTTCGACATAAAGTTATGACTGAATTTTTGGTATGTGAATAGGC

>TRINITY_DN45282_c0_g2_i1 from sample A10 / Example unspliced isoform:

CACTGAGTTGCCTGCCCGACCACTGATACCGTGTTCCACAAGCGTATCGTTCGAGTTTTGGGAAGAAATCTCCTTACGTTTACATAAATGCTCATTTTGTTCCTTTCATATCTGCTCTTCTGCAACTAGAGTTCTTCGTACGGCAAGCCCCTATAAATAAAACCCTCAGTTCTCAATCTCATTTAAAGGTGGCCAGTTTT
TAACCAGGGATTCGATCCCCCGACATCATTATAGGAGCAGCGGATGTCTTGCCGACAGTGGAGTTGGATCTGAAGAGGATGGGGCCAGAATCTTGGAACAAACCAAAAGATTATGCCGGAATATATCGgtaagttctctgtattttttcatccttgggcaccccaggatttttgttttctttattttttttacatttttg
gttgcagATTTACAATTTTGAAGAAGAAATGGTGGAAGGCTGTAGATCCGCCCTTCAAACGATTTCTCTGGTCCATGCTCGCCCTTCTAAAGCCAGTGTTCTACGCATGGCAGGCCCCTCTGTGCAAAACCCCCATTTCTCAATCCATGTCATAGGTCTATACATATTTAGATGGGCTGCATTAGCATGGCAGTGTTTTC
CTCAGGGAAAATGTTCAACCGCAATTGAGTTTCTCGTAAGAGCTTACTCTTGAGGTCTTGATGTGGTTTTGGTACCACTAGAGGGTTTTCCCTCCTTTGCATAGGTAGTCACGAC