NA ----> NA
Intron 1 GTAAGTACCC ... TTATGTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 75.03 | 5.5 | 9 | 24 |
| A2 | 70.37 | 4 | 13 | 6 |
| A3 | 63.64 | 4 | 9 | 5 |
| A4 | 70.37 | 4 | 6 | 13 |
| A5 | 50 | 2 | 2 | 2 |
| A6 | 69.23 | 10 | 29 | 16 |
| A7 | 70.25 | 18 | 45 | 40 |
| A8 | 66.29 | 15 | 25 | 34 |
| A9 | 69.7 | 15 | 46 | 23 |
| A10 | 67.44 | 21 | 52 | 35 |
>TRINITY_DN35214_c0_g1_i2 from sample A6 / Example spliced isoformCGAGGTGGTAAGATGCCAAATGAACATTAACAGGCTTTTCTCAACGAATATTCCCGCGGAGATTGCAGTGATTCCTTCCAAGATGGGGGCAGGGCAACAGTGGGATCTCGAAAGTAATGGAAACACCAAGCAAAATTGTGACAACCCTGATGAGGAAAGAACTCAAACACCCTACTAATCAACAGCGACATGATCGCCCC
TAACGCAGAGTCCTTTCGTGCCAGACTACAAGCCCGCTCCTCTGGTGTGGAAGGGAAGGAGCTTACAAACTTCCTCCAGATTTTGATGGAGTTTTCTGCTTTTCACAGATATACATGTATTCATTTGCAAGTGCTTTTTTGGCTCCTCAAATTAGACTCAAATAGAAAAATGAATTAGGGTTGAGCGAGGGTCACAGCAA
AATTAGCAGCATTTGCAGAAGCAGCAGAAGAACTGTGTAGGGCATGTCTACATACATGTTTTGGGTTTTGCCAGGAAAATCGTGGGAGATCCCGTGAAGGGGATTTCAAGGCGATTGTCAGGATTTTTGAATTCAATCCAGAAATAGAAGTTGAAGTTTCCAGATTTCGGGAATGGATTATTTTCAACTGTTATTACTTA
TAACACACTCATTGTTGGCCTTTGCATTGCTGGTGAAGTTTTACTGGATTGATCTCCAAATGGAAAACTCAAGAAGTGCGTCCTTTATTGAGTCGAACGCCAAATTCTGTCAGTGGCTCTCTTTGAGCTGGAATCTGAGCTGTTGAACCAATTTCATGAGCACAATGTCACCCAGAAACCTTTCTGCGGAATTATCCACC
AAAGTTGAGAAATTGGTCCAGAAGCTGAAAACCTATTATTCACTACCGAAGGTAAAATCAGTGAAGTGTACATAACCTCCTGAACATACCCTTCAACTTTTCAGTTGAAAGATTTTGTTATTCTTTGCCATTTTCAAGATATTCAAAGGCAATGAATGGTGCACATATGGGGAAGTGCTCTTAAAAATAGAGTAACCCTT
TTTGCTTTTTTCCAATTTGTTTTCATGGAAATTTGATGATCTCAATTATTTGAAATTCATACATCGATTGAAATTGT
>TRINITY_DN35214_c0_g1_i1 from sample A6 / Example unspliced isoform:CGAGGTGGTAAGATGCCAAATGAACATTAACAGGCTTTTCTCAACGAATATTCCCGCGGAGATTGCAGTGATTCCTTCCAAGATGGGGGCAGGGCAACAGTGGGATCTCGAAAGTAATGGAAACACCAAGCAAAATTGTGACAACCCTGATGAGGAAAGAACTCAAACACCCTACTAATCAACAGCGACATGATCGCCCC
TAACGCAGAGTCCTTTCGTGCCAGACTACAAGCCCGCTCCTCTGGTGTGGAAGGGAAGGAGCTTACAAACTTCCTCCAGATTTTGATGGAGTTTTCTGCTTTTCACAGATATACAgtaagtacccaactcagtaatcttgatgtctcatcaaacattcatactacagaagcaataccgtttggatttaagtcagaatggt
ccacgttataacaagccatatacccaacaatgagaacaaatatcggcattagttgtagttacaatatgagcattttttttcatggaacattgaagaatctttagcttcgtccccatcgaagaatctttagcttcgtccccgtccttatgtgcagTGTATTCATTTGCAAGTGCTTTTTTGGCTCCTCAAATTAGACTCAA
ATAGAAAAATGAATTAGGGTTGAGCGAGGGTCACAGCAAAATTAGCAGCATTTGCAGAAGCAGCAGAAGAACTGTGTAGGGCATGTCTACATACATGTTTTGGGTTTTGCCAGGAAAATCGTGGGAGATCCCGTGAAGGGGATTTCAAGGCGATTGTCAGGATTTTTGAATTCAATCCAGAAATAGAAGTTGAAGTTTCC
AGATTTCGGGAATGGATTATTTTCAACTGTTATTACTTATAACACACTCATTGTTGGCCTTTGCATTGCTGGTGAAGTTTTACTGGATTGATCTCCAAATGGAAAACTCAAGAAGTGCGTCCTTTATTGAGTCGAACGCCAAATTCTGTCAGTGGCTCTCTTTGAGCTGGAATCTGAGCTGTTGAACCAATTTCATGAGC
ACAATGTCACCCAGAAACCTTTCTGCGGAATTATCCACCAAAGTTGAGAAATTGGTCCAGAAGCTGAAAACCTATTATTCACTACCGAAGGTAAAATCAGTGAAGTGTACATAACCTCCTGAACATACCCTTCAACTTTTCAGTTGAAAGATTTTGTTATTCTTTGCCATTTTCAAGATATTCAAAGGCAATGAATGGTG
CACATATGGGGAAGTGCTCTTAAAAATAGAGTAACCCTTTTTGCTTTTTTCCAATTTGTTTTCATGGAAATTTGATGATCTCAATTATTTGAAATTCATACATCGATTGAAATTGT