NA ----> NA
Intron 1 GTATTTTTCT ... ATTTATTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 82.17 | 14.5 | 31 | 96 |
| A2 | 80.63 | 12.5 | 32 | 68 |
| A3 | 75.25 | 16.5 | 22 | 73 |
| A4 | 84.35 | 12.5 | 43 | 89 |
| A5 | 80.8 | 7 | 22 | 33 |
| A6 | 100 | 0 | 12 | 15 |
| A7 | 84.37 | 5 | 13 | 35 |
| A8 | 96.66 | 0.5 | 12 | 16 |
| A9 | 73.89 | 7 | 15 | 21 |
| A10 | 84.23 | 4.5 | 14 | 34 |
>TRINITY_DN103677_c1_g2_i8 from sample A4 / Example spliced isoformTGATGAGGCATTCAAGCTCTCACGTCTCTTCTGCATTCAACTTAATTTGAGCAAGGGTTTTCGAATCTCACATACTCTGCCGAACCCATCAGTGTATCGATGCAAATTATTTGCCGCTGCAAGATATTTGCAATAGTCTGTGTTCTGATGAGGCATTCAAGCTCTCACGTCTCTTCTGCATTCAACTTAATTTGAGCAAG
GGTTTTCGAATCTCACATACTCTGCCGAACCCATCGGTGTATCGATGCAAATTATTTGCCGCTGCAAGATATTTGCAATAGGCTGTGTTCTGATGAGGCATTCAAGCTCTCACTTGTGTTCTGATGAGGCATGCGATATATAGTAAGGCATTGTGGATTAAGCTCTGCTGTGGCTTCGAGAAAAAAAATTCGAAAAAAGA
GAGCAGGTACCGAAAATGCAGGAAAGGAAAATGAAAAATGAATGGAGAGCAGGACTTGCCCACTGATTTACACATTTTATTAAACCCAAGGTTCGAAGCTTGGCCTAGCACGGAATAACTGGGTTAAGGTTTGAAGTCAGAGCTTTGGTGCCATTTTAGAGGCGTTTCGGGAATTGATTAGCTTTAATGGGGCGAGAAGT
GGAAGAATTGCGGATGATATTTCTTGGTAGTAAGGATTTCGGGGACCATTTTTGGCCCAGCCGCATTGTTGCTTCTTCTTTTCAAGAGCTACTAACGAATCATCATCATCCTTGCAAGAATTACGACCGGATTTTCCGAGAAATTACAACAACGATAATCCAAGGTGGTGGTATTATGCCCCACCTTTACAGTTTACCAG
GAGCTCAAAAGATACACAAGCCCCCTTAATAACTAAGCTGGGCTTAAGGACTGGTTCTTCCCATATGCCCCCGTTCTAAAAGAGTGCGCGGGCTTGGCCGGGCATGGAGACGGCCAACCTGCTGGATTTCGATGGCGTGAAAGTTGTGAGGAAGCGGCGGACATTTTCGTCGAGAAAGCCGAGATCTGGAGGATCATATA
TCTTGTTTCTCAATGAACAAAATCATTCGTCGGCGTGGGCTTCCCCTCCCTCGAATCCTCAAAACATTGAAAATAGTGACAAGGGCTTGAACGATACAACCAGTAAGTATTTAAATTCTTATTCGCACGGTGATGAGTATAATGAAAGATTAGGGTATAGTAATAGCATGGAAAGATTTGAGATGGGGAAGGACGATTTG
GGTCGGACTCTTAAATCTGGTTACAAAATGGCCAGTGGGGATGATGATTCGGTGCCCGAAAGGGATGAAATCAAGAGGGTTCCAAGGGAGTTTGTAGACCTCAATGGCAAGCATTTAGGTAGTAGCCCAGATGATGATAGAGATTATGACAGAGGGGGATCCAAGTCCCAGGATAATGAACACAGCAGGATTTCTGGGAA
GTCTTACAGGGAGAAAAGCCTCGAGGAGTCCAAGGAGTATTCAACCGGGGAGAAGGTCGAGAGGGAAAGAAGTAGATTCAGTAAAGCATTCAAACGGAAGTGCAATAGCAATTATTTGCATCGATCTAAGAGGTTCCATGAATGTGAGGTGGAGAGGAAGGATTCTTATGAAAGGCATGGTAGTCATGAGAGATTGGAGC
ATGATTGTGAGAGGGACCGGGACAAGGATCGATATAGGAGCCTTGATGTGCATGGCAGTATGGAAAGCGGCAAAGGTGGCCTTGGGCACAGTCACAAACCAGAGGTTGTTGTGGGATTGGGCACAGCTGGGACTTCTAGCGATTGGTGTAGTTCTGATGGGTACAAGGT
>TRINITY_DN103677_c1_g2_i4 from sample A4 / Example unspliced isoform:TGGTAAGTGAATTTACATCTATGAATGCTGATCTCCTCTCACACAACGCTCCTCTCTCTTCCTTATTATGTGGTTGCTCTCCTGGATAGAAGATGTCTCGGCTCCGCTCGAGGAGGACTTGCGAAGTCTTGAGAGGGATTTACTCTGCTCGAGAAGGACTTGCAGAAGTAAAGCTTCACGTAGATCTTGCAACGAAGGTC
CACATGACAAGAGCTATGCTACATCGACACGACACGGCAGAAAAACGTACTTCTTCTGCAGATTGTACTGCCAACCGTTTTAGAAAATCAGTGTATTTCGATGCAAATCATTTGCCACTGCAAGACATTTGCAATTGTCTGTGTTCTGATGAGGCATTCAAGCTCTCACGTCTCTTCTGCATTCAACTTAATTTGAGCAA
GGGTTTTCGAATCTCACATACTCTGCCGAACCCATCGGTGTATCGATGCAAATTATTTGCCGCTGCAAGATATTTGCAATAGGCTGTGTTCTGATGAGGCATTCAAGCTCTCACTTGTGTTCTGATGAGGCATGCGATATATAGTAAGGCATTGTGGATTAAGgtatttttctttgtggattaagttttttttaaagttt
ggagttaacaaaaatgataagcatctcatcttgttgaaaacctttatagatttatttagCTCTGCTGTGGCTTCGAGAAAAAAAATTCGAAAAAAGAGAGCAGGTACCGAAAATGCAGGAAAGGAAAATGAAAAATGAATGGAGAGCAGGACTTGCCCACTGATTTCCACATTCTATTAAACCCAAGGTTCGAATCCTGG
CCTAGCACGGAATAACTGGGTTAAGGTTTGAAGTCAGAGCTTTGGTGCCATTTTAGAGGCGTTTCGGGAATTGATTAGCTTTAATGGGGCGAGAAGTGGAAGAATTGCGGATGATATTTCTTGGTAGTAAGGATTTCGGGGACCATTTTTGGCCCAGCCGCATTGTTGCTTCTTCTTTTCAAGAGCTACTAACGAATCAT
CATCATCCTTGCAAGAATTACGACCGGATTTTCCGAGAAATTACAACAACGATAATCCAAGGTGGTGGTATTATGCCCCACCTTTACAGTTTACCAGGAGCTCAAAAGATACACAAGCCCCCTTAATAACTAAGCTGGGCTTAAGGACTGGTTCTTCCCATATGCCCCCGTTCTAAAAGAGTGCGCGGGCTTGGCCGGGC
ATGGAGACGGCCAACCTGCTGGATTTCGATGGCGTGAAAGTTGTGAGGAAGCGGCGGACATTTTCGTCGAGAAAGCCGAGATCTGGAGGATCATATATCTTGTTTCTCAATGAACAAAATCATTCGTCGGCGTGGGCTTCCCCTCCCTCGAATCCTCAAAACATTGAAAATAGTGACAAGGGCTTGAACGATACAACCAG
TAAGTATTTAAATTCTTATTCGCACGGTGATGAGTATAATGAAAGATTAGGGTATAGTAATAGCATGGAAAGATTTGAGATGGGGAAGGACGATTTGGGTCGGACTCTTAAATCTGGTTACAAAATGGCCAGTGGGGATGATGATTCGGTGCCCGAAAGGGATGAAATCAAGAGGGTTCCAAGGGAGTTTGTAGACCTCA
ATGGCAAGCATTTAGGTAGTAGCCCAGATGATGATAGAGATTATGACAGAGGGGGATCCAAGTCCCAGGATAATGAACACAGCAGGATTTCTGGGAAGTCTTACAGGGAGAAAAGCCTCGAGGAGTCCAAGGAGTATTCAACCGGGGAGAAGGTCGAGAGGGAAAGAAGTAGATTCAGTAAAGCATTCAAACGGAAGTGC
AATAGCAATTATTTGCATCGATCTAAGAGGTTCCATGAATGTGAGGTGGAGAGGAAGGATTCTTATGAAAGGCATGGTAGTCATGAGAGATTGGAGCATGATTGTGAGAGGGACCGGGACAAGGATCGATATAGGAGCCTTGATGTGCATGGCAGTATGGAAAGCGGCAAAGGTGGCCTTGGGCACAGTCACAAACCAGA
GGTTGTTGTGGGATTGGGCACAGCTGGGACTTCTAGCGATTGGTGTAGTTCTGATGGGTACAAGGTGTTGGTGAGATCTCTGGATTTCCATAATCTGAGTCATGTAACAGGACGAATGCATTCTGAGCATAGTAGATTGCCAGATGGAAGTTTGAGGGCAGAGGGACGAACTGTGGATAGTCCTTTTGTGGTACATTCAA
AACTAGATAGTGAAGGCCCAAATGGGGGACATGTCAAAACAACAACTGATGGAAGAACATCTGACAGTAGGGATCCTGATATGGAAGCTCTGGTTAAATCATTGCTACAACAAGATGATCTACCTTATGAAGAGGTTCGGTTGACAACGCTGAGGGTTAAGGTAGGTGGAGAAACACATACTGTCCATGCAAATTCCACA
TGCAATGCAGGAGGGATAAAAAAAGGGG