sp|Q9LVD3|PP434_ARATH ----> Pentatricopeptide repeat-containing protein At5g57250, mitochondrial
Intron 1 GTACTAGAAA ... TCGTCATCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 52.38 | 10 | 14 | 8 |
| A2 | 100 | 0 | 9 | 2 |
| A3 | 40 | 3 | 1 | 3 |
| A4 | 56.52 | 5 | 9 | 4 |
| A5 | 100 | 0 | 5 | 6 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 100 | 0 | 0 | 3 |
| A8 | 50 | 2 | 2 | 2 |
| A9 | 100 | 0 | 1 | 1 |
| A10 | 100 | 0 | 4 | 0 |
>TRINITY_DN117430_c7_g3_i2 from sample A1 / Example spliced isoformCGAAAACTTTTAAAAATAACACAAGGGATGATGGCAGCCATTCGAGTAATCGCATAATGATAGTCACGAATTGTGGAAAGACACCGCCAGCCATCAACAAATTCAGAGGCTCCATGCGGTCTTCCCCTCTTAATAATCTCCACAAAACCACTGAACCATTAATCCAAGTAAACATTCAGATTTTTGGCTATCCCTCTCGT
TGTTTGCTTTTGCTGCAACATTCTTCTTACAATACTACTTCCCAATACAAAGAAAATGAAAAACTACAGAATCTGCTGAAGATGGGTATCAAACCCGGAGTGAGATCCTGCAATAACTTGCTCAATTATGTTCTACAATCAGACCATCTTCACCTGCGCTCTTAGCAGGAAAGGGGACATGCAGGAAGCTGAAGGGATGC
TCATCCAAATGGAGCAGATGGGCATTGCTCCTACCGTGGTCACATACAACGTGCTTATTCATGGACATTGTCGAGCAGGTGCCCTTGACAAGGCTTTGGATCTCCTGCAGACAATGGAGAAAACAGGTACTGTTCCTGATGCTTATACTTACAATATATTAATAAACGGCCATTGCAAAAATGGGGATCTGCAGAGGGCA
AATGGGCTTATGAAAGACATGCTAGAAAACAATCTAGGTCCCAATAATGTCACATATAGTACGTTGATTGATGGGTATTGTAAGCAAGGGAAGTTGGATAAGGCGATTGGATTGTATGAAGACATGGTGAAAAAATGCATCAGGGCTGATCTTGTGACTTACACTACACTCATCGATGCACTTTGTAGGGCAGGAAGAAT
GGAGGAGGTGGGGGGGTTTGTACAGAAAATGAGAGAAGAGGGCTTTGTGGGTGATTGTGCTAGCTATGGGGCTCTGATTGGTGGGTATCGCAGGGATGGGCATTTGAGGGATGCACTCAAGCAGCATGATGAGATGGTCAACAATGGGATTCTGCCTTGCGTTTTCACATATTCATCCATCATTGATGCGTTTTGCAAGC
AGGGTAATGGGGAAGCTGTTGCGGCGCTGCAGGGCCAGATGGTGAAGAAGGGTCTGGCATTCAATGTTGTGACCTATGGTGCTATTATCTCTGGATTTTGCAAAAGGGGAAACATGGAAGAGGCGGAGAGATGTTTGGAGAAAATGCTAGATGAGGGTATTGATTCTGATGAGGTTACCTATGGTATGATGGTAGATGGG
TATTGCCGGAAAGGCAAACTCGATAAAGTATTTAGCCTGCTTGAAGAAATGGAAACGAAAGGGGTTTTGGTTACTCTCATCACTTACAATGCTCTTATAAATGGGTTGTGTAAAGGAGGCAAGATGATTGAAGCAAGTAATCTGTTGAAAGAAATCTCAGCGAGAGGTTTGGCTGCCGACAATGTGACTTACAGCACCCT
GATGGATGGGTACTGCAAGGGAGGAAGTGTGTTGATAGCATTGGACGTGTACAAGGAAATGGAGGCAAGAGGAATTGAGCCGGATGTCATCACTTGTAACGTGCTTATCAAAGCACTTTGTATGGCAGGTCATTTTCGGGAAGCGATTGATGTCTTCAAGTGGATGCCTGACAGAGGTTTGGATCCCAATGCTGTTACTT
ACTGCACGCTTATTGGTGAATACTGTAAAGCAGATAAGATAGAGGAGGCTTTGGCACTCTGGGAAGAACTGCAAAGACGTGGTGTTATGCCCAACATTTCTAATTACAATTCAATTATCAATGCCTTTTGTAAGAAAGGTAGGATATGGATTGCAAGCAACCTCCTTAAAGATGCCTTGGACAAAGGTTTTGTTCCAGAT
GTGATTACCTACAGGGCTTTGATTAAGGCACATTCTCAGGCAGGAAATATACAGGAGGCCTCTGAACTTCTTGATAACATGATAGGTTGTGGAATTGTGCCAGACGACTCTCTCTATGACACTGTCATCGACAGACTTTGCAATCAATGGAAATTTGATACTGGTACGAAACTCTACAATGAAATAGAAAGGAAAGGCAT
GCTCCCAAGTATTAGCAGTTACATGTCACTCATCAGAGTACTCTTGAAAAATTGCAGAAAGCAGGAGGTTAATGAATTTCTGAACAGCATCTTTGTAAAAAAATTGGCTTCTGATGTCAGAACTTGCAATATGCTGATTGATTGTTTATGCAAGGAAGATGCAGACTTTGTCATGAATTTGTATGACAGAATGGAGGAGA
AAGGTGTTGCACCTAATGCTTCTACATACAGTGCTGTCATTGGTGGACTTTGCAAAGTAGGAAAGGTAGATATGGCATTAAAGATGCATTCGAGAATGCAGAAAATGGGTTTCCTGCCTGTAATTGAAAGCTTCAGCACCCTTATAAATGGTCTTTGCAAGAAGGGCAGTGTGGAAGAGGCTAATAATATTTTTAAACTA
ATGCTAGAGAAAGGTTTCGTTCCTAATGTCCAAATTTACAATAAGATGATAATTTCAAACTGTGAAAGGGGATGCATAAAGGGAGCCTTAAAATTGCATTATGAAATGCAAGATAAGGGGTTATTAGCAACACTGGAAACATATCACTCGCTTATCTATAGACTTTGCAAAGAAAGGGATACAGATGGAGCTCTAAGGCT
TTACAATGAAATGGAGGCCAAACCTATGTTGCCAACTGTGTCTAGTTGTTCAGTTGTCCTCGATCTATTATGCAGAGAAGGGAGGGTGAAAGAATCATGCAAGCTTTTAAGGGCAGCATTGAAGAAGGGAATCATGGCAGATGAAGTTGTTTGTGCAAAAGTAATTTATTGCCTGTGCAGAGAAGGTTGTATGGATGAAG
CTTTAGAACTTTGCAAGGAAATGGACTTAAAAGGCACTATACCTAATGAGGTCACATATAATTCAATAATCGATGTACTTTGCATTGAAGGCCGCCTTGTGGAAGCTTTCAGGTTATTTGATGCTATGGAGAGAACAGGTGTTACTCCCACTCTTACCACTTACTCGAAACTCATACGTGGTCTCTGTAAGGAAGGCTAT
TTAGAGGATGCAGAGGAGCTCTTGAATAAATTGTTAGCCATGGGCCTTGTCCCAAACATTAATATTTACAATCTACTGATTTCTGGATACTGCAAGCAAGGAAAAGTTGAGGCGGCCTCCACTCTTCTCTTTGAAATGGAGAAGTGGAGTATTCTGCCAGATGGTTTTATGTTTGAGTCACTGATTAAAGGGCATTGCAA
AATATGCAATATGGAGGCGGCTCTGACACTGTTTCATGAAATGGAAAGGAGAGGAATTGCATCAACTCTCTTTTGCTACACCAACCTAATTAATGGGCTTTGCAGTAAAGGCAGGATGGAAGAAGCAAGTAAACTTGTAGAAGAAATGCTTGAGAGGGATTTACTTCTTGGCATCAATATTGACAGTAGATTACACTCTG
AATATTTTAGAAGATTGAATTCTTTGGGAACTGATAAATTGTTTGTTGGGCCAGAGCTTGATGTCTCATTTGCTGATTTCATCAAAAGGCTTTACCATGAAGGAAAGATACAGGAAGCAGCAACTATATTAAGGGAATTGGAATTAAAGAATCCAGCTTCTGGTATTTCAAGTTGTACTGTGCAACTTGATAGGTCAGTC
AATGATGATGAAATTGATACAACTTCCATGCTGACAGCTAATACAGATGGAGAAATTCCAAAGGAGGGTTTGGTCACTCGTGTCAACTCACAGGATATGGACTCTATCATCAGGCTTTGTAAGGAGGGTAGAATGCAAGATGCGTTGATGTTTTATGATGAAATGATTAAAAAGGGGCTAGTGCCAAACTTTAAGACTTA
TAGTGTTCTCATTAGTTCACTTGACACAAATGATAAGCTGCAAGAAGCAAACAAGGTAATGAAAGAAATGCTAGTATTGCTCAACCATATCACTTGAGGGAGGAACACTGTAAATTATGGATAATTTGAGGTATGGTAAAAATTTGACTACTTCAAAGACTCAAGCGAAATGGGAGAGGATTTAGAATCTGTTCCATTGG
CCCTCAATTCGCTTAGTTGATCTACTTGTGGAGAAACTGTCTTGACAGTGGACATATTGTCATTCATTTTTGAGGAATACAGGTTTAGGTATTATCAGGTTGAGATCTTCTGCTCTTAACCGAGAACACAATCGCAGGGAAGAGGGCAAGGCTCTTCCACAGATTATTGTGTGACATCAGAGAGATCTTGCCCTACCTTG
TTTATCGATCAACACCTTTTGCTGTTTGAATGTGGTGGGATGTTGATGCCATTCAATTGATGTCTGTTCAAGAGAACTGATCTCTTAACTTGGCAGTTTGCTTATATATGTTTAACTTGGAACTTCTTATACACAGGGCTCTGTGTCGAAGTCAGGAAAGTTGCAGAGATGTTTTCAACCAACTAGCCCC
>TRINITY_DN117430_c7_g3_i1 from sample A1 / Example unspliced isoform:CGAAAACTTTTAAAAATAACACAAGGGATGATGGCAGCCATTCGAGTAATCGCATAATGATAGTCACGAATTGTGGAAAGACACCGCCAGCCATCAACAAATTCAGAGGCTCCATGCGGTCTTCCCCTCTTAATAATCTCCACAAAACCACTGAACCATTAATCCAAGTAAACATTCAGATTTTTGGCTATCCCTCTCGT
TGTTTGCTTTTGCTGCAACATTCTTCTTACAATACTACTTCCCAATACAAAGAAAATGAAAAACTACAGAATCTGCTGAAGATGGGTATCAAACCCGGAGTGAGATCCTGCAATAACTTGCTCAATTATGTTCTACAATCAGACCATCTTCACCTGgtactagaaatctattctcaagtgcattctaataaaatttatcc
caatgctcacacttacacaatcgtcatcagCGCTCTTAGCAGGAAAGGGGACATGCAGGAAGCTGAAGGGATGCTCATCCAAATGGAGCAGATGGGCATTGCTCCTACCGTGGTCACATACAACGTGCTTATTCATGGACATTGTCGAGCAGGTGCCCTTGACAAGGCTTTGGATCTCCTGCAGACAATGGAGAAAACAG
GTACTGTTCCTGATGCTTATACTTACAATATATTAATAAACGGCCATTGCAAAAATGGGGATCTGCAGAGGGCAAATGGGCTTATGAAAGACATGCTAGAAAACAATCTAGGTCCCAATAATGTCACATATAGTACGTTGATTGATGGGTATTGTAAGCAAGGGAAGTTGGATAAGGCGATTGGATTGTATGAAGACATG
GTGAAAAAATGCATCAGGGCTGATCTTGTGACTTACACTACACTCATCGATGCACTTTGTAGGGCAGGAAGAATGGAGGAGGTGGGGGGGTTTGTACAGAAAATGAGAGAAGAGGGCTTTGTGGGTGATTGTGCTAGCTATGGGGCTCTGATTGGTGGGTATCGCAGGGATGGGCATTTGAGGGATGCACTCAAGCAGCA
TGATGAGATGGTCAACAATGGGATTCTGCCTTGCGTTTTCACATATTCATCCATCATTGATGCGTTTTGCAAGCAGGGTAATGGGGAAGCTGTTGCGGCGCTGCAGGGCCAGATGGTGAAGAAGGGTCTGGCATTCAATGTTGTGACCTATGGTGCTATTATCTCTGGATTTTGCAAAAGGGGAAACATGGAAGAGGCGG
AGAGATGTTTGGAGAAAATGCTAGATGAGGGTATTGATTCTGATGAGGTTACCTATGGTATGATGGTAGATGGGTATTGCCGGAAAGGCAAACTCGATAAAGTATTTAGCCTGCTTGAAGAAATGGAAACGAAAGGGGTTTTGGTTACTCTCATCACTTACAATGCTCTTATAAATGGGTTGTGTAAAGGAGGCAAGATG
ATTGAAGCAAGTAATCTGTTGAAAGAAATCTCAGCGAGAGGTTTGGCTGCCGACAATGTGACTTACAGCACCCTGATGGATGGGTACTGCAAGGGAGGAAGTGTGTTGATAGCATTGGACGTGTACAAGGAAATGGAGGCAAGAGGAATTGAGCCGGATGTCATCACTTGTAACGTGCTTATCAAAGCACTTTGTATGGC
AGGTCATTTTCGGGAAGCGATTGATGTCTTCAAGTGGATGCCTGACAGAGGTTTGGATCCCAATGCTGTTACTTACTGCACGCTTATTGGTGAATACTGTAAAGCAGATAAGATAGAGGAGGCTTTGGCACTCTGGGAAGAACTGCAAAGACGTGGTGTTATGCCCAACATTTCTAATTACAATTCAATTATCAATGCCT
TTTGTAAGAAAGGTAGGATATGGATTGCAAGCAACCTCCTTAAAGATGCCTTGGACAAAGGTTTTGTTCCAGATGTGATTACCTACAGGGCTTTGATTAAGGCACATTCTCAGGCAGGAAATATACAGGAGGCCTCTGAACTTCTTGATAACATGATAGGTTGTGGAATTGTGCCAGACGACTCTCTCTATGACACTGTC
ATCGACAGACTTTGCAATCAATGGAAATTTGATACTGGTACGAAACTCTACAATGAAATAGAAAGGAAAGGCATGCTCCCAAGTATTAGCAGTTACATGTCACTCATCAGAGTACTCTTGAAAAATTGCAGAAAGCAGGAGGTTAATGAATTTCTGAACAGCATCTTTGTAAAAAAATTGGCTTCTGATGTCAGAACTTG
CAATATGCTGATTGATTGTTTATGCAAGGAAGATGCAGACTTTGTCATGAATTTGTATGACAGAATGGAGGAGAAAGGTGTTGCACCTAATGCTTCTACATACAGTGCTGTCATTGGTGGACTTTGCAAAGTAGGAAAGGTAGATATGGCATTAAAGATGCATTCGAGAATGCAGAAAATGGGTTTCCTGCCTGTAATTG
AAAGCTTCAGCACCCTTATAAATGGTCTTTGCAAGAAGGGCAGTGTGGAAGAGGCTAATAATATTTTTAAACTAATGCTAGAGAAAGGTTTCGTTCCTAATGTCCAAATTTACAATAAGATGATAATTTCAAACTGTGAAAGGGGATGCATAAAGGGAGCCTTAAAATTGCATTATGAAATGCAAGATAAGGGGTTATTA
GCAACACTGGAAACATATCACTCGCTTATCTATAGACTTTGCAAAGAAAGGGATACAGATGGAGCTCTAAGGCTTTACAATGAAATGGAGGCCAAACCTATGTTGCCAACTGTGTCTAGTTGTTCAGTTGTCCTCGATCTATTATGCAGAGAAGGGAGGGTGAAAGAATCATGCAAGCTTTTAAGGGCAGCATTGAAGAA
GGGAATCATGGCAGATGAAGTTGTTTGTGCAAAAGTAATTTATTGCCTGTGCAGAGAAGGTTGTATGGATGAAGCTTTAGAACTTTGCAAGGAAATGGACTTAAAAGGCACTATACCTAATGAGGTCACATATAATTCAATAATCGATGTACTTTGCATTGAAGGCCGCCTTGTGGAAGCTTTCAGGTTATTTGATGCTA
TGGAGAGAACAGGTGTTACTCCCACTCTTACCACTTACTCGAAACTCATACGTGGTCTCTGTAAGGAAGGCTATTTAGAGGATGCAGAGGAGCTCTTGAATAAATTGTTAGCCATGGGCCTTGTCCCAAACATTAATATTTACAATCTACTGATTTCTGGATACTGCAAGCAAGGAAAAGTTGAGGCGGCCTCCACTCTT
CTCTTTGAAATGGAGAAGTGGAGTATTCTGCCAGATGGTTTTATGTTTGAGTCACTGATTAAAGGGCATTGCAAAATATGCAATATGGAGGCGGCTCTGACACTGTTTCATGAAATGGAAAGGAGAGGAATTGCATCAACTCTCTTTTGCTACACCAACCTAATTAATGGGCTTTGCAGTAAAGGCAGGATGGAAGAAGC
AAGTAAACTTGTAGAAGAAATGCTTGAGAGGGATTTACTTCTTGGCATCAATATTGACAGTAGATTACACTCTGAATATTTTAGAAGATTGAATTCTTTGGGAACTGATAAATTGTTTGTTGGGCCAGAGCTTGATGTCTCATTTGCTGATTTCATCAAAAGGCTTTACCATGAAGGAAAGATACAGGAAGCAGCAACTA
TATTAAGGGAATTGGAATTAAAGAATCCAGCTTCTGGTATTTCAAGTTGTACTGTGCAACTTGATAGGTCAGTCAATGATGATGAAATTGATACAACTTCCATGCTGACAGCTAATACAGATGGAGAAATTCCAAAGGAGGGTTTGGTCACTCGTGTCAACTCACAGGATATGGACTCTATCATCAGGCTTTGTAAGGAG
GGTAGAATGCAAGATGCGTTGATGTTTTATGATGAAATGATTAAAAAGGGGCTAGTGCCAAACTTTAAGACTTATAGTGTTCTCATTAGTTCACTTGACACAAATGATAAGCTGCAAGAAGCAAACAAGGTAATGAAAGAAATGCTAGTATTGCTCAACCATATCACTTGAGGGAGGAACACTGTAAATTATGGATAATT
TGAGGTATGGTAAAAATTTGACTACTTCAAAGACTCAAGCGAAATGGGAGAGGATTTAGAATCTGTTCCATTGGCCCTCAATTCGCTTAGTTGATCTACTTGTGGAGAAACTGTCTTGACAGTGGACATATTGTCATTCATTTTTGAGGAATACAGGTTTAGGTATTATCAGGTTGAGATCTTCTGCTCTTAACCGAGAA
CACAATCGCAGGGAAGAGGGCAAGGCTCTTCCACAGATTATTGTGTGACATCAGAGAGATCTTGCCCTACCTTGTTTATCGATCAACACCTTTTGCTGTTTGAATGTGGTGGGATGTTGATGCCATTCAATTGATGTCTGTTCAAGAGAACTGATCTCTTAACTTGGCAGTTTGCTTATATATGTTTAACTTGGAACTTC
TTATACACAGGGCTCTGTGTCGAAGTCAGGAAAGTTGCAGAGATGTTTTCAACCAACTAGCCCC