sp|Q9C9V9|COG5_ARATH ----> Conserved oligomeric Golgi complex subunit 5

Intron 1 GTAAACATTT ... TTTCTTGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	100	0	0	1
A2	100	0	2	2
A3	-1	0	0	0
A4	0	3	0	0
A5	33.33	4	0	2
A6	16.67	5	0	1
A7	40	3	0	2
A8	33.33	12	0	6
A9	14.29	6	0	1
A10	40	3	0	2

>TRINITY_DN42593_c0_g3_i3 from sample A8 / Example spliced isoform

CACGGGAGTTTGAATTTTCTTTTCTTTCGCGTTTTCATTTTCTGAATTATCACCATGACACCTCTATCAGACCAGGGAGTTTGAATTTTGTTTTCTTTCTTGAGCGTTTTCAGTTCAGAATTCTCACCAGATCTCCACCACTGCATTCTCCAATCCATCACAGACCCGCTGGCAACCAGATCTGTAGAGAATCGCCCCGA
ATTCGCATTCCCATTTACCAGGTATGTATGTTTTCTGATCCATGCAATTCTACAATGTCTGTTCTATAGAATAGAAGGGCAAAGAAAATGGCGAGGTCCATCAATACATTTCACAGAGGAGGTGGGATACTATCATCTTCAAACAACACTCCGTCCTCCCCCTTGCACCGCATCGCCACCCTCAAACCCTCTTCGACACC
CCGAGAGCCTGCTTCCAATGATCCGTGGCGGGATTCGAACGACGGACCCCTCGAAGAAGACTTCACGAACGATCCCATCTTCGTCAAATTCCTCTCCGATGGTTTCAACTCGACAAAATTCGCCAGCGAGGCTCTCAGCAGCGGATCCGCAGTCTCATGCGCCGATAAATTAGCTGAAGGGATCCGCCTGCTCGAAAAAC
AACTGAGAAATGAAGTCTATTCACGCCATGACGAGCTGATTCAGCAGCTGTGGAGCTTAAAGGATGCCGAGGGGGTTTTGAACGTGGTTAAATCGGGGGTTAGCAGCTTGCAGGGTTCGGTGCAGAGGGTTAGGTCTGAGATTGCAGAGCCCTACAAGCATATCAGGTTAAAGTCCCAGCAGCTTTCGCACCTCCATGAG
ACCGTTGAGCTTCTCCAGACCACGGTTAGGGTTATTAGACAAGTGAGAAAGCTGAGAGAATTGATGGATTCTGAAAGTGCCAGTAGCAAGCTGGACCTTACGAAAGCTGCTCAAATGTATAATGAGATCGAAACCCTGAGAAAGGAAGGGGATCTGCTGGGCATAGAGGTTGTCGATGAGGAGATCCCCTGGCTGGTGGA
AGCGGGGAAACGATTACGATCGGAGGCGATGAAGGTTTTCGAGAGCGGAATGGAGGCTTTGAACCAGGCGGAAGTAGGAAGTGCCCTGCAAGTGTATTACAACATGGGCGAGTTAAGAGAAACTGTGGAGGCCATGATTACTAAGTATAGGTCCCAGGTTGTTAAGAGTGTGAGTTGGGCGTTGGACATGAAGGCCATAT
TGGCTAGTTTTGGTTCTGGCTTTGGTCCAGGCGGGATTCATAGGAGATATACGCCACAGATCAGAGGGAGTTTGAAGGCGAAGGAGGGGCCGTGGAAGAGGATGGGATCTTGTATGGATCAGTTGCATTCGACTGTAGTTGCAGTGTGGCATCTGCAAAGAGTGCTGTCGAAGAAGAGGGATCCTTTCACTCATGCTCTG
TTTCTGGAATAAATAATGCAGATATGTAATTGTTAAAAGAACTCCATGCCACTTACAACTCTACAAGTTAAGAATTCATCTTTTCTTTAAAGGTCATAAGGTGGTCAAAATTGGAATTCCAAGGGAAACACCTAAATTCTCTCGCAACTAAACATGACCCTAACTACTAAGGCTCAAGGCCCCTTTTCTCTAGCAACAAG
GGTTTTTAAAAAAAATTTGAACACATCCAACACAAGTATTAGTAAAGGTGGATCTGAAAGGCAAGTAACTACTTTTGTTTTACTCTTAAAAATTAAAAGGGATCATAAGGTTTTACACTATTACCTAAACAGCAATATAAATCAGAAAAGAGTACGTTAAAGGTGGCCAACGTCTGAGAAGTACCGTAGCTAACTCATCT
CCACTGTACCGTGCACTAAGATTGTAGTGATGGAAGCTGAGATCCTGACCGTCGAGATGCTCAGCCTCGTGATGGCTATTAGGGCATAGTAATGACAGGGCTACAGTTGTTATGCTGTCAGGAAAAGGAAAAACTCACCTGCTTCGAAAAAATTTAATCCAAAGTGACCGTGGGACTCCTTAGAAGGTCTGCCCTCTTTC
CCTGTTTCCCATGGTTCTGCGGTTACAGTTCAGTGTAGGAAAGAAAAATGGACTCGATTGAAGGTTTTGTACCGAAAGGGAAGACCCAACTGACCTTGTTGACTCTTTCCAGGCGGTAAAGGACTCAGGTGTGAGATGAAGTTGCTTTCTGAAAGGTTTTAAGCTGGAAGCAAGGGTAAGCATTATTTCAACTGCAACTG
GTCTCTTTACTTAATTTGGTAAAAGGTGAAAGTCTAGGGTCACTACTGCGTAAAAGAAGGGATTTAAATTTCATGTAATGACCAGAACTTGGCATTCTAGCCTTGCGTATGTATGTTTCTTTGTAGTTTCCGTGGTTAGGTAAATAATGTTACTGCAGTAGTTTTCTGGAAAATCTAGACTCTCTAAAGGCCCTTCGTGG
CAGCTATATGATGTATTGTAATTTTTAATTCTCTCTCATACTGGATTTCAATACGTGTTTCAGAGGAGTCTCTTCGCGGCTCTGAAAATCTTATGTTTTTATCTTCTTTTTAAGTTTTAGGCTTAAATGATTGTTTCTCATAAAAGTATTTGAAGTTACTTTAAAA

>TRINITY_DN42593_c0_g3_i1 from sample A8 / Example unspliced isoform:

TCCAGGCGGTAAAGGACTCAGgtaaacatttcctctttttcttaaggggaaaaatcagtgtggataatgttaatgggaagcttttaacttaagaactaaccaatcgtaattttcttgcagGTGTGAGATGAAGTTGCTTTCTGAAAGGTTTTAAGCTGGAAGCAAGGGTAAGCATTATTTCAACTGCAACTGGTCTCTTT
ACTTAATTTGGTAAAAGGTGAAAGTCTAGGGTCACTACTGCGTAAAAGAAGGGATTTAAATTTCATGTAATGACCAGAACTTGGCATTCTAGCCTTGCGTATGTATGTTTCTTTGTAGTTTCCGTGGTTAGGTAAATAATGTTACTGCAGTAGTTTTCTGGAAAATCTAGACTCTCTAAAGGCCCTTCGTGGCAGCTATA
TGATGTATTGTAATTTTTAATTCTCTCTCATACTGGATTTCAATACGTGTTTCAGAGGAGTCTCTTCGCGGCTCTGAAAATCTTATGTTTTTATCTTCTTTTTAAGTTTTAGGCTTAAATGATTGTTTCTCATAAAAGTATTTGAAGTTACTTTAAAA

Intron 2 GTAAGCAGAA ... ACTTATGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	75.57	15	40	44
A2	64.44	19	35	23
A3	73.53	12	29	29
A4	65.69	18.5	40	24
A5	60.03	15	18	25
A6	75.68	110	369	208
A7	74.12	70	210	110
A8	79.24	81.5	310	230
A9	74.5	73	209	161
A10	78.2	32	118	77

>TRINITY_DN120113_c0_g1_i12 from sample A2 / Example spliced isoform

TCTAAAGGATATTGATTGTAAAGCAGGAATCAATCCAAGAGCATCCCAGTCTCCTGTACCAATTTTGATGTTGTGGATTAAACATATGTGCTTTATTCTTTTATTAAGTTAAACCTGATTGTTTATGTCATTATTTCATATACTTCAAAGAGATGCTGAAACCATTGCCTATATCTACAAGTTGCATAATAATGCAAGTT
AGTCGTTTGTTTTCCATATAAAATCACTCTTGGAATTGAGTGGGAATAATAGAGTAACTCTGGTCTCTGAAGTGGTGAACTCAGAGAGTATTTTCCATGGTTTGCTATGAAGTTGGCGTTGCAGTTGGAAGAAGGGTATTAACGTACATTGAGGAATAGCTGTTGTTTTATGCAAAAGTTTGCTTCATACTCTGGGAAAC
AGATCTGTAACCAAGAGAATGTACTGCCCAATTTAATGGCACAAATGTTCACTATCAGGTCGCACTCCAGTCTAACTGTGAGATGATTCACCTTTTGGTATCCATGGCAAATGTTGAAGTCTGAAGGGGTGAAGTGTAACTTCATTTTAGTCCACAAGGTTAGATTCATTGCCTGGAGGGCTGAAGTGTAACTTCATTTT
AGTCCACAAGGTTAGATTCATTACCCGGAGGCGATCTCAAGAATTTCGTAGTCTCTGGGAACGGTCACTGACAGATCAATATGTATCGTAGTGAACTAAGACGACTCCATAATCTCCAGGTATCTTAAAATAAAACCTGTAGAGATTCCCTTCTTGAGCTATGAGCTGCTCGCTGTCCATTTGGCAATCATCGCGATCTC
ATACGATATTTCTGGTGTTCAATTTCTTCTTGTAATTCCTTATTCACGTCAAATCTTTGCATTGAGGTGAGCTGGAAAGATCTTTGCAAATTTAATGTTGATGTCCACGGT

>TRINITY_DN120113_c0_g1_i7 from sample A2 / Example unspliced isoform:

CAACCACACATAACACCTCTCTCGCCTCTCTCAGACCACGGGAGTTTGAATTTTCTTTTCTTTCGCGTTTTCATTTTCTGAATTATCACCATGACACCTCTATCAGACCAGGGAGTTTGAATTTTGTTTTCTTTCTTGAGCGTTTTCAGTTCAGAATTCTCACCAGATCTCCACCACTGCATTCTCCAATCCATCACAGA
CCCGCTGGCAGCCAGATCTGTAGAGAATCGCCCCGAATTCGCATTCCCATTTACCAGGTATGTATGTTTTCTGATCCATGCAATTCTACAATGTCTGTTCTATAGAATAGAAGGGCAAAGAAAATGGCGAGGTCCATCAATACATTTCACAGAGGAGGTGGGATACTATCATCTTCAAACAACACTCCGTCCTCCCCCTT
GCACCGCATCGCCACCCTCAAACCCTCTTCGACACCCCGAGAGCCTGCTTCCAATGATCCGTGGCGGGATTCGAACGACGGACCCCTCGAAGAAGACTTCACGAACGATCCCATCTTCGTCAAATTCCTCTCCGATGGTTTCAACTCGACAAAATTCGCCAGCGAGGCTCTCAGCAGCGGATCCGCAGTCTCATGCGCCG
ATAAATTAGCTGAAGGGATCCGCCTGCTCGAAAAACAACTGAGAAATGAAGTCTATTCACGCCATGACGAGCTGATTCAGCAGCTGTGGAGCTTAAAGGATGCCGAGGGGGTTTTGAACGTGGTTAAATCGGGGGTTAGCAGCTTGCAGGGTTCGGTGCAGAGGGTTAGGTCTGAGATTGCAGAGCCCTACAAGCAGATC
AGGTTAAAGTCCCAGCAGCTTTCGCACCTCCATGAGACCGTTGAGCTTCTCCAGACCACGGTTAGGGTTATTAGACAAGTGAGAAAGCTGAGAGAATTGATGGATTCTGAAAGTGCCAGTAGCAAGCTGGACCTTACGAAAGCTGCTCAAATGTATAATGAGATCGAAACCCTGAGAAAGGAAGGGGATCTGCTGGGCAT
AGAGGTTGTCGATGAGGAGATCCCCTGGCTGGTGGAAGCGGGGAAACGATTACGATCGGAGGCGATGAAGGTTTTCGAGAGCGGAATGGAGGCTTTGAACCAGGCGGAAGTAGGAAGTGCCCTGCAAGTGTATTACAACATGGGCGAGTTAAGAGAAACTGTGGAGGCCATGATTACTAAGTACAGGTCCCAGGCTGTTA
AGAGTGTGAGTTGGGCGTTGGACATGAAGGCCATATCGGCTAGTGTTGGTTCTGGCTTTGGTCCAGGCGGGATTCAGAGGAGCGGTACGCCACAGATCGGAGGCAGTTTGAAGGCGAAGGAGGGGCTGTGGCAGAGGATGGGATCTTGTATGGATCAGTTGCATTCGACTGTAGTTGCAGTGTGGCATCTGCAAAGAGTG
CTGTCGAAGAAGAGGGATCCTTTCACTCATGCTCTGTTTCTTGAAGAAGTAATGCAGGAAGGTGATCCAATGTTGACAGATCGAGTTTGGGATGCGCTTGTCAAGGCTTTTGCAAGTCAAATGAAATCTGCATTCACAGCATCGAGTTTTGTAAAAGAGATACTTGTCTTGGGTTATCCAAAATTGTTGTCCATGGTAGA
GAATCTGATTGAGAAAATTTCGCGAGACACCAGTGTTAAAGGTGTCCCTCCAGCTGTCAAGACAGAAGGGAAAAATCAAATGCTAGCTACTATAGAATCTTTCCAGATAGCTTATCTGGCACACTGTCTGAGCAGCCTTTCTGATCTTGTCAATAATTTGTTCCCAATGTCCAGCCGTGGTAGTATTCCATCACAGGAGC
AGATTTCAAGGTTTATTTCTCGCATTCAAGAAGAAGTTGAAGCAGTTAAATTGGATGCACATCTAACACTCCTTGTTTTACGTGAGATTGGTAAAGTCCTGCAGCTGCTTGCAGAAAAAGCTGAGTATCAGATATCCACAGGTCCAGAAGCACGCCAAGTGACAGGTCCTGCGATGCCTTCACAAGTTAAGAATATTGCT
CTTTGTCTTCATCTACAAGAGGTTCACACGCGCATTACTGCTATGATTTCCAGCTTGCCAACAGTAGCTATGGAAGTTTTGTCACCATCTCTAGGTTCCATATATGGTGTGGCATTTGATTCAGTAACACCCCTTTTTCAGGCCATGCTTGATCGCCTTGAAAGTTGCATTTTACAGATCCATGATCAAAACTTTGGGGG
AGAGGACATGAATGCTGGCATGGATGAGCATGGTTCTAGATACATGGAGGAAGTACAGAAATCAATAATCCACTTTCGCAATGAATTTCTTTCAAAATTACTGCCTCCTTCATCTCATTTTGTCTCAGTTTCTGGGGAGAGCATTTGTGCCAGGCTTACTAGAAAGATGGCTGCTCGTGTGCTAACTTTCTTTGTTCGAC
ATGCTGCTCTTGTAAGGCCTCTTTCAGAATCAGGAAAATTACGGTTGACCAGGGATATGGCTGAGTTAGAATTGGTAGTTGGACAGAACTTGTTTCAGATGGAGCAGTTGGGTGCACCTTACCGGGCTCTTCGAGCTTAAAAGCCCCTGTTCTTTCAGGAAACAGCCAAACTTGGCAGTAGTCCTCTCCTGCAAGATCTA
CCGCGCAGTGTGGTCCTTCATCATCTTTATTCTCGAGCTCCAGATGAGTTGGAATCTCCTTTGCAGAGGACAAAATTGACACCCAAGCAGTATTCATTATGGTTAGATTCACAAGGAGAAGAGCAAATATGGAAAGGTATTAAAGCTACTCTGGATGATTATGCTGCAAAGATTAGTGCCAGAGGAGATAAAGAATTCAG
CCCTGTATATCCTCTTATGCTTCAATTGGGCTCCTTGCTGGCTGGAAACGCTCCAGGGTCTAAAGGATATTGATTGTAAAgtaagcagaaaaattggttgaatctagcatctgcattgtctcattctggagatgtttatcaagatttgttttggtcttttgaagcaatctagaaacattcaatttacattacattggtct
gttttgggtctttataatcttgtttagctgttgacttatgcagGCAGGAATCAATCCAAGAGCATCCCAGTCTCCTGTACCAATTTTGATGTTGTGGATTAAACATATGTGCTTTATTCTTTTATTAAGTTAAACCTGATTGTTTATGTCATTATTTCATATACTTCAAAGAGATGCTGAAACCATTGCCTATATCTACA
AGTTGCATAATAATGCAAGTTAGTCGTTTGTTTTCCATATAAAATCACTCTTGGAATTGAGTGGGAATAATAGAGTAACTCTGGTCTCTGAAGTGGTGAACTCAGAGAGTATTTTCCATGGTTTGCTATGAAGTTGGCGTTGCAGTTGGAAGAAGGGTATTAACGTACATTGAGGAATAGCTGTTGTTTTATGCAAAAGT
TTGCTTCATACTCTGGGAAACAGATCTGTAACCAAGAGAATGTACTGCCCAATTTAATGGCACAAATGTTCACTATCAGGTCGCACTCCAGTCTAACTGTGAGATGATTCACCTTTTGGTATCCATGGCAAATGTTGAAGTCTGAAGGGGTGAAGTGTAACTTCATTTTAGTCCACAAGGTTAGATTCATTGCCTGGAGG
GCTGAAGTGTAACTTCATTTTAGTCCACAAGGTTAGATTCATTACCCGGAGGCGATCTCAAGAATTTCGTAGTCTCTGGGAACGGTCACTGACAGATCAATATGTATCGTAGTGAACTAAGACGACTCCATAATCTCCAGGTATCTTAAAATAAAACCTGTAGAGATTCCCTTCTTGAGCTATGAGCTGCTCGCTGTCCA
TTTGGCAATCATCGCGATCTCATACGATATTTCTGGTGTTCAATTTCTTCTTGTAATTCCTTATTCACGTCAAATCTTTGCATTGAGGTGAGCTGGAAAGATCTTTGCAAATTTAATGTTGATGTCCACGGT