sp|Q9M1S3|ARP1_ARATH ----> Probable RNA-binding protein ARP1
Intron 1 GTGGGTTGAT ... AGTATGACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 34.62 | 17 | 9 | 4 |
| A2 | 25 | 6 | 2 | 0 |
| A3 | 31.58 | 26 | 12 | 0 |
| A4 | 26.67 | 11 | 4 | 1 |
| A5 | 40 | 3 | 2 | 2 |
| A6 | 21.15 | 41 | 11 | 1 |
| A7 | 10.81 | 33 | 4 | 2 |
| A8 | 18.75 | 52 | 12 | 2 |
| A9 | 17.5 | 33 | 7 | 0 |
| A10 | 26.42 | 39 | 14 | 3 |
>TRINITY_DN114781_c0_g2_i2 from sample A1 / Example spliced isoformCTCCTGTGTGCCTTGGCATGTGGGGTATGTTGAGGGATTAGGTGACATTCCGTGATCCCGACGCTGCAAGGAGAGCATGTGCAGACCAAAGTCCTATCATAGATGGTAGGCGAGCCAACTGCAACTTGGCTTCACTTGGTCGGCCTCGCCCCTCCCCACCTTATGGGCGCATGCGCCCAGGAAGCCCCTATCTGGGAGCT
CCTCAAGGTGGGCAGACTTATGTTGGAAGCCCAACTTATCACCAATCTGTACCATTTCCCTATCAACAAAGTTTTGCATATCCTCCATATGGATATGCAACATTTGCATCAGAGTATACTTATCCACAGAATATTTACGGTCCATATCTAGGGGCACAGTATCCTCAGATATATGGGTCGGCCAGGACAATTAGTCCAGT
ATATCCTTATGCACACTTTGGCCAACATCTCCAGACTGGACCTGGCTATCCTGCTCTGCAAGGTTATGGAGTTGCAGCACCTCACCTTGTGCAGTTTGCTTCACCAGGAGCTAGTACTATCAACCCTATTTCGCAACCATATGGAGCAGCCCTGCCGGCAGTTCAGGGACCATTCCCATCGGCAGTACTTTCACCTGTTC
CAGCACATCAACCCTTCATAATTCCTCCGCAATCCCAGCAACAGTTCACACAAGGTGGCAGTGCATCAGACCAACCATCAGGTTGAGGACCATCTGTACAAGGAACACCTCTACATTGTCAGGTATTCTCTAGGGCACGGCAAGACTAAGAGCAGCAGTACTGCTACCTGAGTGGCAGACTTCAAATCTTGGCTTGTATG
TTTCTGTTTGTCATTCTAGAGGTGAGGACCATTCAGTCATCCTGTCATATTACAAGCAATGGAATAAACAGTTCATTGAAATTACTACACCACTAGGTAACTTGTTTTTATTTGTTGGACACAGTCCATTGTTTTATATGAATTAAAAACCTGCATATTATAAGAAGAGATTTGGTCTGCATCATTTAGGGCTTTTTAAG
GTTTTTTTGAATTCCCCAGTTTAAGATCAGTATAAAGCAGTGGAGGCAAGATGAAGTTTGAGTGAATAGTTCAATATGCTTATCTGATTAGATATAGAGCATCTACCAACTATATATCTTAGGGTTGGGTTATGGTCATGGAGGTATGGAGGGAGGTTTAAGATTGTGGATATCAGGTTCAAATATAATTCTACTTTCTG
GGGAGGGGCAACACTGATAATTTTTTTATACAAATCTGGGATATCATGTCAAATTACCTTTTCTTCTCCTTTTTCATGTAGTTCCAAG
>TRINITY_DN114781_c0_g2_i3 from sample A1 / Example unspliced isoform:CTCCTGTGTGCCTTGGCATGTGGGGTATGTTGAGGGATTAGGTGACATTCCGTGATCCCGACGCTGCAAGGAGAGCATGTGCAGACCAAAGTCCTATCATAGATGGTAGGCGAGCCAACTGCAACTTGGCTTCACTTGGTCGGCCTCGCCCCTCCCCACCTTATGGGCGCATGCGCCCAGGAAGCCCCTATCTGGGAGCT
CCTCAAGGTGGGCAGACTTATGTTGGAAGCCCAACTTATCACCAATCTGTACCATTTCCCTATCAACAAAGTTTTGCATATCCTCCATATGGgtgggttgatattctttttcacactcttgctccctgatttttgttttgttgaagtaaggatgatgtgaaaatctcttacaatttacttcaacatggtttgagtatgac
agATATGCAACATTTGCATCAGAGTATACTTATCCACAGGTGCACACTTCCATTCCTGTAAAAGCTTTCTTTTTCAGACACAAGTTGGAGTTTTGAACTTGAATAGCTAATGGCTGTAAATGTTTCTCTTGTTTGCATGCTTATTGACCTTCTATCTTTTGTTTTCTGATGAATGTTCCTTTCATGTGGACATTGCAGAA
TATTTACGGTCCATATCTAGGGGCACAGTATCCTCAGATATATGGGTCGGCCAGGACAATTAGTCCAGTATATCCTTATGCACACTTTGGCCAACATCTCCAGACTGGACCTGGCTATCCTGCTCTGCAAGGTTATGGAGTTGCAGCACCTCACCTTGTGCAGTTTGCTTCACCAGGAGCTAGTACTATCAACCCTATTT
CGCAACCATATGGAGCAGCCCTGCCGGCAGTTCAGGGACCATTCCCATCGGCAGTACTTTCACCTGTTCCAGCACATCAACCCTTCATAATTCCTCCGCAATCCCAGCAACAGTTCACACAAGGTGGCAGTGCATCAGACCAACCATCAGGTTGAGGACCATCTGTACAAGGAACACCTCTACATTGTCAGGTATTCTCT
AGGGCACGGCAAGACTAAGAGCAGCAGTACTGCTACCTGAGTGGCAGACTTCAAATCTTGGCTTGTATGTTTCTGTTTGTCATTCTAGAGGTCATGGACAGATGCCCACAGTTGCTTCTGAAGTGCACAGCCTCGGTCAAGTTTGTTCGTTCTGGACATTCAAGAAACTAAAAACAGGACCCTCTCTCACTCTGGCCCTG
GGAAAGCTGTGTTTGTGTATGTGCCCCTTATTCATGTTGGGATTTAGGAGGAAGTGTTAACAGTCTAGAATGATTCAAGGGTTTCAGTGATAGCAATCTAATGTTCAAGTTCTGGTCAGTTTTGGCAAGGTAGATCTTAAAGTGGGCAGTCTTTTATGGGAGAAAAACAAGTATAGAAAACTAAAATACAACTAGCAGCC
TAAAGTTAGTACAGTTTGTGAATGCATATCTAAATTTAGATTCATTCTTTCATTCCTAGAACTAAATTATCTGTACAGAGTTAATGTTAATGATATAATCACTTTGTTCGGTATCATATGAAAACTTACTCATGGAGTTTCTCCTATTTTGAATTCTCAATTAAAAAACTTTGACAATATATCATATTGTTATGGAGCAC
TGGGAGTTTGGTTTCATATTGAACATTATATTTGAATGGATCATGGTGTTGAAGCTTTCTTAAAGAGAACGGTT
Intron 2 GTGCACACTT ... GACATTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 31.25 | 11 | 2 | 5 |
| A2 | 30.77 | 9 | 0 | 4 |
| A3 | 33.33 | 20 | 0 | 10 |
| A4 | 25 | 12 | 1 | 4 |
| A5 | 77.78 | 2 | 2 | 7 |
| A6 | 11.43 | 31 | 1 | 4 |
| A7 | 9.09 | 30 | 0 | 3 |
| A8 | 10.2 | 44 | 2 | 5 |
| A9 | 16.67 | 30 | 0 | 6 |
| A10 | 16.13 | 26 | 3 | 5 |
>TRINITY_DN114781_c0_g2_i2 from sample A1 / Example spliced isoformCTCCTGTGTGCCTTGGCATGTGGGGTATGTTGAGGGATTAGGTGACATTCCGTGATCCCGACGCTGCAAGGAGAGCATGTGCAGACCAAAGTCCTATCATAGATGGTAGGCGAGCCAACTGCAACTTGGCTTCACTTGGTCGGCCTCGCCCCTCCCCACCTTATGGGCGCATGCGCCCAGGAAGCCCCTATCTGGGAGCT
CCTCAAGGTGGGCAGACTTATGTTGGAAGCCCAACTTATCACCAATCTGTACCATTTCCCTATCAACAAAGTTTTGCATATCCTCCATATGGATATGCAACATTTGCATCAGAGTATACTTATCCACAGAATATTTACGGTCCATATCTAGGGGCACAGTATCCTCAGATATATGGGTCGGCCAGGACAATTAGTCCAGT
ATATCCTTATGCACACTTTGGCCAACATCTCCAGACTGGACCTGGCTATCCTGCTCTGCAAGGTTATGGAGTTGCAGCACCTCACCTTGTGCAGTTTGCTTCACCAGGAGCTAGTACTATCAACCCTATTTCGCAACCATATGGAGCAGCCCTGCCGGCAGTTCAGGGACCATTCCCATCGGCAGTACTTTCACCTGTTC
CAGCACATCAACCCTTCATAATTCCTCCGCAATCCCAGCAACAGTTCACACAAGGTGGCAGTGCATCAGACCAACCATCAGGTTGAGGACCATCTGTACAAGGAACACCTCTACATTGTCAGGTATTCTCTAGGGCACGGCAAGACTAAGAGCAGCAGTACTGCTACCTGAGTGGCAGACTTCAAATCTTGGCTTGTATG
TTTCTGTTTGTCATTCTAGAGGTGAGGACCATTCAGTCATCCTGTCATATTACAAGCAATGGAATAAACAGTTCATTGAAATTACTACACCACTAGGTAACTTGTTTTTATTTGTTGGACACAGTCCATTGTTTTATATGAATTAAAAACCTGCATATTATAAGAAGAGATTTGGTCTGCATCATTTAGGGCTTTTTAAG
GTTTTTTTGAATTCCCCAGTTTAAGATCAGTATAAAGCAGTGGAGGCAAGATGAAGTTTGAGTGAATAGTTCAATATGCTTATCTGATTAGATATAGAGCATCTACCAACTATATATCTTAGGGTTGGGTTATGGTCATGGAGGTATGGAGGGAGGTTTAAGATTGTGGATATCAGGTTCAAATATAATTCTACTTTCTG
GGGAGGGGCAACACTGATAATTTTTTTATACAAATCTGGGATATCATGTCAAATTACCTTTTCTTCTCCTTTTTCATGTAGTTCCAAG
>TRINITY_DN114781_c0_g2_i3 from sample A1 / Example unspliced isoform:CTCCTGTGTGCCTTGGCATGTGGGGTATGTTGAGGGATTAGGTGACATTCCGTGATCCCGACGCTGCAAGGAGAGCATGTGCAGACCAAAGTCCTATCATAGATGGTAGGCGAGCCAACTGCAACTTGGCTTCACTTGGTCGGCCTCGCCCCTCCCCACCTTATGGGCGCATGCGCCCAGGAAGCCCCTATCTGGGAGCT
CCTCAAGGTGGGCAGACTTATGTTGGAAGCCCAACTTATCACCAATCTGTACCATTTCCCTATCAACAAAGTTTTGCATATCCTCCATATGGGTGGGTTGATATTCTTTTTCACACTCTTGCTCCCTGATTTTTGTTTTGTTGAAGTAAGGATGATGTGAAAATCTCTTACAATTTACTTCAACATGGTTTGAGTATGAC
AGATATGCAACATTTGCATCAGAGTATACTTATCCACAGgtgcacacttccattcctgtaaaagctttctttttcagacacaagttggagttttgaacttgaatagctaatggctgtaaatgtttctcttgtttgcatgcttattgaccttctatcttttgttttctgatgaatgttcctttcatgtggacattgcagAA
TATTTACGGTCCATATCTAGGGGCACAGTATCCTCAGATATATGGGTCGGCCAGGACAATTAGTCCAGTATATCCTTATGCACACTTTGGCCAACATCTCCAGACTGGACCTGGCTATCCTGCTCTGCAAGGTTATGGAGTTGCAGCACCTCACCTTGTGCAGTTTGCTTCACCAGGAGCTAGTACTATCAACCCTATTT
CGCAACCATATGGAGCAGCCCTGCCGGCAGTTCAGGGACCATTCCCATCGGCAGTACTTTCACCTGTTCCAGCACATCAACCCTTCATAATTCCTCCGCAATCCCAGCAACAGTTCACACAAGGTGGCAGTGCATCAGACCAACCATCAGGTTGAGGACCATCTGTACAAGGAACACCTCTACATTGTCAGGTATTCTCT
AGGGCACGGCAAGACTAAGAGCAGCAGTACTGCTACCTGAGTGGCAGACTTCAAATCTTGGCTTGTATGTTTCTGTTTGTCATTCTAGAGGTCATGGACAGATGCCCACAGTTGCTTCTGAAGTGCACAGCCTCGGTCAAGTTTGTTCGTTCTGGACATTCAAGAAACTAAAAACAGGACCCTCTCTCACTCTGGCCCTG
GGAAAGCTGTGTTTGTGTATGTGCCCCTTATTCATGTTGGGATTTAGGAGGAAGTGTTAACAGTCTAGAATGATTCAAGGGTTTCAGTGATAGCAATCTAATGTTCAAGTTCTGGTCAGTTTTGGCAAGGTAGATCTTAAAGTGGGCAGTCTTTTATGGGAGAAAAACAAGTATAGAAAACTAAAATACAACTAGCAGCC
TAAAGTTAGTACAGTTTGTGAATGCATATCTAAATTTAGATTCATTCTTTCATTCCTAGAACTAAATTATCTGTACAGAGTTAATGTTAATGATATAATCACTTTGTTCGGTATCATATGAAAACTTACTCATGGAGTTTCTCCTATTTTGAATTCTCAATTAAAAAACTTTGACAATATATCATATTGTTATGGAGCAC
TGGGAGTTTGGTTTCATATTGAACATTATATTTGAATGGATCATGGTGTTGAAGCTTTCTTAAAGAGAACGGTT