NA ----> NA
Intron 1 GTTCTTTTCT ... CAACTGTTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 44.23 | 8 | 3.5 | 6.5 |
| A2 | 36.5 | 5 | 1.5 | 3 |
| A3 | 16.66 | 4 | 2 | 1 |
| A4 | 23.07 | 7 | 3.5 | 3 |
| A5 | 18.18 | 7 | 2.5 | 2 |
| A6 | 25.29 | 41 | 18 | 16 |
| A7 | 29.35 | 24 | 10.5 | 11 |
| A8 | 26.46 | 33 | 15.5 | 14 |
| A9 | 29.01 | 38 | 17.5 | 17 |
| A10 | 22.97 | 20 | 11 | 7.5 |
>TRINITY_DN36114_c0_g1_i2 from sample A7 / Example spliced isoformGGGGGAAAAAGGGCAACCCAAAGATGGAAAATCATTATAACCAAAGTTAAAGAAAAGCTCCAACTCCAAGAAGCTCATGGCGAAGGTAGGAGGCACCTAGCTGTTACCAAGTAAAATAAATTAATGCGAAAGGAGGTACTGACAGCACCCTGTACTGTACTTGACCCTTGGCTCATCGAAGAGTTCTTTCAACATAATGG
CATTTACTCTCACTTGGGAATGGATTAACATTTCGCTCCAGAGGGTCTCAGCCTAGGGTTTTACAAGCAAAATATAGTCTTAGCTATACATGGTTCCAACGCTATGCTCCAGTTCGATTTATAGGTTTATCTTCGTGGTTAGTCTATCAAGGCGGTGCGTCAACACCCTACCAGAAGTCTGCGTTCTCCAAGAGCAGGAT
TCCTGGGCATCTTCGAGGATTTTTCATTTCACAGCGGGCAGCCTTCGATTCTCGGTAAGCAATGAATTGACCATGATCTATCCCCTTTGCTGTTTGGTCGAACTCATACATGGAAAGACCTTTAATGAAGGTCTGCGAGGAAGGTTGGGACGACCACTAGTATTTAACTTACTTAAGATGGTCCTGGCGTTTATGTCATG
GAGAAAATCGCCATATAGGCTCGTGTTAAGTCCTGGGTAAAATGCTAAGCACCCAACATTTTTTTAAAGGCTTTACAAACCCTGTAATATATACATATTTTTTTAAACGAATAAGTTAAGGGATAACTGTTTGACGGTAATCCTTTCGCTCAATTGCAGTTCTTTGCCAAAGCATTTTCACACTAGGGTTTTATAACCCA
TACTTAAATTTAACTCGTTTTTCAGTTCTCTTAATGAATTTCAGCATGGAAGTAGTAAATAAGAATGCAGATAGTGTCGTTGTTTCCAG
>TRINITY_DN36114_c0_g1_i1 from sample A7 / Example unspliced isoform:GGGGGAAAAAGGGCAACCCAAAGATGGAAAATCATTATAACCAAAGTTAAAGAAAAGCTCCAACTCCAAGAAGCTCATGGCGAAGGTAGGAGGCACCTAGCTGTTACCAAGTAAAATAAATTAATGCGAAAGGAGGTACTGACAGCACCCTGTACTGTACTTGACCCTTGGCTCATCGAAGAGTTCTTTCAACATAATGG
CATTTACTCTCACTTGGGAATGGATTAACATTTCGCTCCAGAGGGTCTCAGCCTAGGGTTTTACAAGCAAAATATAGTCTTAGCTATACATGGTTCCAACGCTATGCTCCAGTTCGATTTATAGGTTTATCTTCGTGGTTAGTCTATCAAGGCGGTGCGTCAACACCCTACCAGAAGTCTGCGTTCTCCAAGAGCAGGAT
TCCTGgttcttttcttacaactgttagGGCATCTTCGAGGATTTTTCATTTCACAGCGGGCAGCCTTCGATTCTCGGTAAGCAATGAATTGACCATGATCTATCCCCTTTGCTGTTTGGTCGAACTCATACATGGAAAGACCTTTAATGAAGGTCTGCGAGGAAGGTTGGGACGACCACTAGTATTTAACTTACTTAAGA
TGGTCCTGGCGTTTATGTCATGGAGAAAATCGCCATATAGGCTCGTGTTAAGTCCTGGGTAAAATGCTAAGCACCCAACATTTTTTTAAAGGCTTTACAAACCCTGTAATATATACATATTTTTTTAAACGAATAAGTTAAGGGATAACTGTTTGACGGTAATCCTTTCGCTCAATTGCAGTTCTTTGCCAAAGCATTTT
CACACTAGGGTTTTATAACCCATACTTAAATTTAACTCGTTTTTCAGTTCTCTTAATGAATTTCAGCATGGAAGTAGTAAATAAGAATGCAGATAGTGTCGTTGTTTCCAG