NA ----> NA
Intron 1 GTCAAATCAA ... GCATTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 60 | 3 | 2 | 7 |
| A2 | 60 | 3 | 3 | 6 |
| A3 | 60 | 2 | 4 | 2 |
| A4 | 47.37 | 5 | 6 | 3 |
| A5 | -1 | 0 | 0 | 0 |
| A6 | 73.91 | 3 | 7 | 10 |
| A7 | 42.86 | 2 | 1 | 2 |
| A8 | 60 | 2 | 1 | 5 |
| A9 | 45.45 | 3 | 2 | 3 |
| A10 | 77.78 | 2 | 8 | 6 |
>TRINITY_DN47761_c0_g1_i1 from sample A7 / Example spliced isoformGTATTTACCGAGCTTCAGATGTCTCCTGTTTGAGAGTTGATTTTCTTCAACTCTCAGGAACACAAAAGGGCATCGAGACGATTCTTCTCCTATCGACCGCCTCCTGCTTTTCATAGACTTCGGACATGGAGCAAAGTGAGGCGTTTCTGTAGCCCAGTTGTGACAGAGGCGGAAGCCCCCTTTCGCCGCGCAAGCATCCA
AAACACAGTGAGTAATTTCTGTTAGATGGCCTCGGTCGTCCTGGAGCTGGAGCTGCTGCACCCTGTTTCGAATGAAAGTCCTCACAATTACCTAGATTTAAGCGCGCTCCTTTCACCGACATGTGCGGAGGTTATCTGTCAGATGGCCTCAGGAGCGCTGTAGCTGCAGCCTGCAGCTGCTACACCCTGTCTCGAACGAA
AGTCCTCGTAATTACGCCGGCGTTCTTTCTGCGAGGATAATCCTTGCTCCTGTAGCAAGATTCCTCGTCTATAGGACGAATGGAATCTTGCCAAGTGTATGGTCGCGGGTTTGTTTTTATCCGTCGATTTTGATAAACCAACGCCGGATCGCTGCTTGTCTGCGCGGGCTTGTGTGCGCGGTTGCCTGTGTGGTTTCGTG
TACCTACGGATCGCTATTGCATATACAGGATACCAAACCCTAATGCTCAACAGTATTCACATCAGAAAGCGGATATCTCTG
>TRINITY_DN47761_c0_g1_i3 from sample A7 / Example unspliced isoform:GTATTTACCGAGCTTCAGATGTCTCCTGTTTGAGAGTTGATTTTCTTCAACTCTCAGGAACACAAAAGGGCATCGAGACGATTCTTCTCCTATCGACCGCCTCCTGCTTTTCATAGACTTCGGACATGGAGCAAAGTGAGGCGTTTCTGTAGCCCAGTTGTGACAGAGGCGGAAGCCCCCTTTCGCCGCGCAAGCATCCA
AAACACAGTGAGgtcaaatcaaattcaaattttaagttatttgtaacaatttaataagatattttgacagtggttactggtcaggcattttcagTAATTTCTGTTAGATGGCCTCGGTCGTCCTGGAGCTGGAGCTGCTGCACCCTGTTTCGAATGAAAGTCCTCACAATTACCTAGATTTAAGCGCGCTCCTTTCACCG
ACATGTGCGGAGGTTATCTGTCAGATGGCCTCAGGAGCGCTGTAGCTGCAGCCTGCAGCTGCTACACCCTGTCTCGAACGAAAGTCCTCGTAATTACGCCGGCGTTCTTTCTGCGAGGATAATCCTTGCTCCTGTAGCAAGATTCCTCGTCTATAGGACGAATGGAATCTTGCCAAGTGTATGGTCGCGGGTTTGTTTTT
ATCCGTCGATTTTGATAAACCAACGCCGGATCGCTGCTTGTCTGCGCGGGCTTGTGTGCGCGGTTGCCTGTGTGGTTTCGTGTACCTACGGATCGCTATTGCATATACAGGATACCAAACCCTAATGCTCAACAGTATTCACATCAGAAAGCGGATATCTCTG