sp|Q10MN5|KN14F_ORYSJ ----> Kinesin-like protein KIN-14F

Intron 1 GTAAGTAGCC ... TGGTCCCCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	59.38	39	64	50
A2	59.83	47	76	64
A3	60.36	22	38	29
A4	81.25	6	30	22
A5	57.65	18	26	23
A6	66.12	72	155	126
A7	66.67	114	281	175
A8	66.16	133	283	237
A9	63.74	97	205	136
A10	68.31	61	165	98

>TRINITY_DN96890_c0_g1_i2 from sample A2 / Example spliced isoform

AGCAGGGAGCTCGGCCTTCTATATTAGTCTTTTGCGTTGGGACAGGGATCGAATCTCAACAGCTCTCCTTTTCTTCTTTTTTCTTTTCGAGGCACATACGAAAAACATGGCGGAGCTTTGATCTCCTCGCTTCCGATCACTTGTGTAGGGAGTAGGCCGAGCTCGCAGGAGGTCCAGGGATCAAACCTCTAATGGCGACG
GCAGAGAGTCTTCTTGCCTTGGCACTGGCATTCGATTCCAGCACCACTTCTTCTTCTTCTTCCATTTACACAGACGTAAGTGGGGTAACCGACGATGCCGCCTACCAGGGGACGACTAGACTCAGCGATGTGGATTTGGCATCCAGAAGAGCCGAAGAAGCAGCATCTCGAAGGTACCAGGCCGCAGGATGGCTGAGGAA
GATGGTTGGAGTCGTTGCGTCGAAGGATTTGCCGAACGAGCCATCGGAGGAGGAGTTTCGCCTTGGCTTGCGAAATGGACTCCTCCTCTGCAATGTTATCAACAAAGTTCATCCAGGCTCTGTTCCAAAGGTGGTGGAGAATCCAGCTGCATTACCTCCTCCTGACGGAGCGGCTCTATCAGCTTATCAGTATTTTGAAA
ATGTGAGGAACTTCCTTGTCGCAGTTCAAGAACTGAACCTCCCAACCTTTGAAGCGTCTGATTTGGAAAAGGGGGGATCGTCAGCGAAAGTTGTGAACTGCATTTTAGCTTTGAAAGCATATAGTGATTGGAAGCAAACTGGTGGAAATGGTTTTTGGAAATATGGGGGTAACTTGAAGCCCCCCAGTGTGGCAAAACCC
CCCATTAAACCGGGGAGAAACACTGATCCATTCACCCAGTCTATATTGAAGAATTATCAGCCGCCTGCAGATTCAAGCACGCTACTGAATAATCTTGGTTTAAACTTTCCTGAACGACTTCTTGCCAGAGAGAATTTGATTCAGGATCAATCCTTAAATTCAACTGCGATGGATCCTTCGTCACAATCACTTAATAGGCT
CATTCTTTCAATCCTGTCTGACAAAAAGCCAGAAGAAGTGCCTACACTTGTGCAATCTATGTTAGCAAAAGTAATGGAAGAGTTTGAGCGACGTCTAGCCACGCAGGGTGAGCAGTTGAAGAAGGTTGTAAAGGACCTTGTTGTTAATGGGGACGAAAAGTCTTTTCCAAAGTCAAAAATTTTGGCAGCGCTAGCAACAG
TTTCAGGAGAGCCCAAGGTCGATATCAGCGAAGATGAGGGAAAAGAGGAAGTTGATGGTGTTAGACAAGGACAGCACGAGGACTGCTTCTCTAATATGTCAAGTGATGCAGATGAGTATGAAAAACCTGCTACCAATCTGCAAACACGTTTCGATCTCCAACAAAGGGGAATTGGAGAACTGAAATGGATGCTAAATAAC
ACGAAGGAAGGTGTTCAGTTGATGCAAATGGAATGGAATAAACAATTGTACAATCTTGGAAAGCATATGCGTGGACTAGCACAGGCTGCAGCAGGCTACCACAAAGTTCTAGAGGAAAATCGACAACTATACAATCAAGTGCAGGATCTGAAAGGAAGCATAAGGGTGTATTGCCGAGTCAGACCATTCTTGCCTGGCCA
AGCCAACAGTCAGAGTACAGTGGATTTTATTGGGGATGATGGTCAGCTTATGATTGCAAATCCTGCAAAGCAAGGAAAGGATACACGTAAATCTTTCACATTTAACAAAGTTTTTGGAGCATCTGCAACTCAAGAGGAAGTGTTTCTGGATACCCGGCCATTGATCAGATCTGTTCTGGATGGTTACAATGTTTGCATTT
TTGCATATGGGCAAACAGGTTCTGGAAAGACATACACAATGACTGGCCCTAAGGTGATTACAGAGGAGAGTTGGGGTGTGAACTATCGAGCCTTGAATGACTTATTCCAGATATCAAAACAAAGAAAGGATGCCTTTGTATATGAGGTTGCTGTTCAAATGATTGAAATATACAATGAACAAGTCCGGGATCTTCTTGTT
TCTGACAGTTCCAATAAAAGATTAGAAATACGCAACAATTCACAGCAGAATGGACTCAATGTGCCGGATGCAAATCTAATACCCGTTGCATCTACATCTGCCGTGATCGAGTTAATGAACATTGGACACAAGAACCGTGCTGTGGGAGCAACCGCTTTGAATGATCGGAGCAGCCGTTCTCACAGTGTTTTGACAGTGCA
TGTTCAGGGCAGAGATCTTGCTTCTGGAACAATTCTTCGAGGGTGTCTTCATCTTGTTGACCTTGCTGGAAGTGAGAGAGTTGACAAATCCGAGGCCACCGGGGATAGATTAAAGGAAGCACAGCATATTAACAGATCACTTTCAGCTTTAGGAGATGTGATTGCTGCTCTTGCACAAAAGAACTCCCATGTTCCTTACC
GAAATAGCAAGCTCACACAACTGCTTCAGGATTCCTTAGGTGGACAGGCAAAAACTCTCATGTTTGTGCACATAAGTCCCGAATTAGATGCACATGGGGAGACAATCAGCACTCTAAAATTTGCAGAGCGGGTTGCAACCGTTGAACTTGGTGCTGCACGTTCCAACAAGGAAAGCAGTGAGGTTAGGGAGCTGAAGGAA
CAGATTGCTAGCTTGAAGAATTCACTGGCAAAGAAGGAAGCAGAAGTTGAGCAGAGAATGAAGATTGGTGCCTCACCAATAACTAGGGATTCGAGGAACAGTGTTGAAAGGCAGAGAATGAGGGCTGGTGTCTCACCAATGCATCCGCAATTGCCGACCATGGGAGATGTCCAGTCACATATCAACCGCAGGCAGCCTAT
GGAAGATGTTGTCAACATAGATGTGCCAAACAATATCACTGGAAAACAAAAGAGAGCAACTTATGGTCAAGACTTTCCAGCAGAGGAGTCAATTGATACAAGTTTGTTTGGCAATGGTTTAGGTGAAATGAAGAAACCGGTGCGCCGACCATCTCCAGATAGAAGATTGTCGTTGGATGGTAATCATACAAAGAACAAAA
TTAAGCATGATATTTTTGAAGAGCAAGATATGAGAAGTTGGCAGGACAAGGTGATGATGAACAAATATCTACCTATCCAGAGTCCAGCTTTGCAAGATGATGTATTGAGATCTTGGGAAGCCCGTGAACTGGAAAAACCAGACAATCCTTCGGAACTATATAACCAAATATACCATGCCAATCCAAGAAAGATTCATCCA
GATTGCGAAGAAGAGAAATTGATACTGCAGCAGCTTCATGAGATGCACGGGGTAATTAAAAGCAGAAGACCTGTTAGGAAAGACAAACGTGAGTATGATGGGCGAAGAACTCCTTATGAAGCTGCAACTACTGATGAATCAGAGGTTGAAATTGATGCAAGAAGCAAAGATGACTATCTAACAAGTGATTCATCAGAAGC
AGATCTTCTCTGGCAATTCAAGGTACCAAATGTGGCTGCTGTGACCCCAGTTGAACATGCCTCACTGATCAAGAAGCCACCGCAGAGGATGTCGAAGACTCCTGAGCGAAGAAGTCCAAGCCAATCTCAAGGCCCTCCTGGAGCAGTTAAGCTTGAGCGTAAGCTGTCAAATGGCACTGCGCAATCACAAGGTCGAACAG
GAAGGTTGCCTTCTGGAGGAATAGAAGGGAAGCGATCTTCAACTGGGGGAAAATTCAAGCGTGAATCCAGAGTAGTTCCAATTACATCTGAAGGATCAGCTGTAGAGTATTATACAAAGAAGACTTTGACCTGTCAGACAGTTATATCTCCGTTTGGAGTTTCATCCAGGTCATCCAAAAGTCGGCAATAATAGTGCTGC
TGGTGCTGTTTTTCTCCCAGTGATTATACTTACAATTCTTTTAGCTTCATAGCTATCTGCCTCTCTTCTGATGATATCTCTTGATTGGATTGCAGAGTGTTGTAGAATATGATAGATAGGTAGAAGAGGGCAATAATTTGGTTGCTCCTCCATCTCTTCTAATGTTTATGGTTTTCAGAATAGAGTTGTGACGGCCATGC
TCACATGAGATTCGCATGCTACGAGGCAGGGCCTTCTATATTTGCTTTGCAATGTACCTATTGTAGATTTATCAAAATATAATTGAAATATTCTTTGAGTTTGAGCTCAACTTTCTATGCTCCGATTCTATATGTGCATTTTGAATCACATACTGTTTGTGTCTAAAGAATCCTTCTTCAGCAACACGGAAAATATATTT
CTCCAACTCGTAGTAGCACAACATTTATTTCTCCAACTCTTCAGCAGTGCCTCTTTGGTTGTAATTAGCATCTACTGAAGGCCGATTACGTTTTGGA

>TRINITY_DN96890_c0_g1_i1 from sample A2 / Example unspliced isoform:

AGCAGGGAGCTCGGCCTTCTATATTAGTCTTTTGCGTTGGGACAGGGATCGAATCTCAACAGCTCTCCTTTTCTTCTTTTTTCTTTTCGAGGCACATACGAAAAACATGGCGGAGCTTTGATCTCCTCGCTTCCGATCACTTGTGTAGGGAGTAGGCCGAGCTCGCAGGAGGTCCAGGGATCAAACCTCTAATGGCGACG
GCAGAGAGTCTTCTTGCCTTGGCACTGGCATTCGATTCCAGCACCACTTCTTCTTCTTCTTCCATTTACACAGACGTAAGTGGGGTAACCGACGATGCCGCCTACCAGGGGACGACTAGACTCAGCGATGTGGATTTGGCATCCAGAAGAGCCGAAGAAGCAGCATCTCGAAGGTACCAGGCCGCAGGATGGCTGAGGAA
GATGGTTGGAGTCGTTGCGTCGAAGGATTTGCCGAACGAGCCATCGGAGGAGGAGTTTCGCCTTGGCTTGCGAAATGGACTCCTCCTCTGCAATGTTATCAACAAAGTTCATCCAGGCTCTGTTCCAAAGGTGGTGGAGAATCCAGCTGCATTACCTCCTCCTGACGGAGCGGCTCTATCAGCTTATCAGTATTTTGAAA
ATGTGAGGAACTTCCTTGTCGCAGTTCAAGAACTGAACCTCCCAACCTTTGAAGCGTCTGATTTGGAAAAGGGGGGATCGTCAGCGAAAGTTGTGAACTGCATTTTAGCTTTGAAAGCATATAGTGATTGGAAGCAAACTGGTGGAAATGGTTTTTGGAAATATGGGGGTAACTTGAAGCCCCCCAGTGTGGCAAAACCC
CCCATTAAACCGGGGAGAAACACTGATCCATTCACCCAGTCTATATTGAAGAATTATCAGCCGCCTGCAGATTCAAGCACGCTACTGAATAATCTTGGTTTAAACTTTCCTGAACGACTTCTTGCCAGAGAGAATTTGATTCAGGATCAATCCTTAAATTCAACTGCGATGGATCCTTCGTCACAATCACTTAATAGGCT
CATTCTTTCAATCCTGTCTGACAAAAAGCCAGAAGAAGTGCCTACACTTGTGCAATCTATGTTAGCAAAAGTAATGGAAGAGTTTGAGCGACGTCTAGCCACGCAGGGTGAGCAGTTGAAGAAGGTTGTAAAGGACCTTGTTGTTAATGGGGACGAAAAGTCTTTTCCAAAGTCAAAAATTTTGGCAGCGCTAGCAACAG
TTTCAGGAGAGCCCAAGGTCGATATCAGCGAAGATGAGGGAAAAGAGGAAGTTGATGGTGTTAGACAAGGACAGCACGAGGACTGCTTCTCTAATATGTCAAGTGATGCAGATGAGTATGAAAAACCTGCTACCAATCTGCAAACACGTTTCGATCTCCAACAAAGGGGAATTGGAGAACTGAAATGGATGCTAAATAAC
ACGAAGGAAGGTGTTCAGTTGATGCAAATGGAATGGAATAAACAATTGTACAATCTTGGAAAGCATATGCGTGGACTAGCACAGGCTGCAGCAGGCTACCACAAAGTTCTAGAGGAAAATCGACAACTATACAATCAAGTGCAGGATCTGAAAGGAAGCATAAGGGTGTATTGCCGAGTCAGACCATTCTTGCCTGGCCA
AGCCAACAGTCAGAGTACAGTGGATTTTATTGGGGATGATGGTCAGCTTATGATTGCAAATCCTGCAAAGCAAGGAAAGGATACACGTAAATCTTTCACATTTAACAAAGTTTTTGGAGCATCTGCAACTCAAGAGGAAGTGTTTCTGGATACCCGGCCATTGATCAGATCTGTTCTGGATGGTTACAATGTTTGCATTT
TTGCATATGGGCAAACAGGTTCTGGAAAGACATACACAATGACTGGCCCTAAGGTGATTACAGAGGAGAGTTGGGGTGTGAACTATCGAGCCTTGAATGACTTATTCCAGATATCAAAACAAAGAAAGGATGCCTTTGTATATGAGGTTGCTGTTCAAATGATTGAAATATACAATGAACAAGTCCGGGATCTTCTTGTT
TCTGACAGTTCCAATAAAAGATTAGAAATACGCAACAATTCACAGCAGAATGGACTCAATGTGCCGGATGCAAATCTAATACCCGTTGCATCTACATCTGCCGTGATCGAGTTAATGAACATTGGACACAAGAACCGTGCTGTGGGAGCAACCGCTTTGAATGATCGGAGCAGCCGTTCTCACAGTGTTTTGACAGTGCA
TGTTCAGGGCAGAGATCTTGCTTCTGGAACAATTCTTCGAGGGTGTCTTCATCTTGTTGACCTTGCTGGAAGTGAGAGAGTTGACAAATCCGAGGCCACCGGGGATAGATTAAAGGAAGCACAGCATATTAACAGATCACTTTCAGCTTTAGGAGATGTGATTGCTGCTCTTGCACAAAAGAACTCCCATGTTCCTTACC
GAAATAGCAAGCTCACACAACTGCTTCAGGATTCCTTAGGTGGACAGGCAAAAACTCTCATGTTTGTGCACATAAGTCCCGAATTAGATGCACATGGGGAGACAATCAGCACTCTAAAATTTGCAGAGCGGGTTGCAACCGTTGAACTTGGTGCTGCACGTTCCAACAAGGAAAGCAGTGAGGTTAGGGAGCTGAAGGAA
CAGATTGCTAGCTTGAAGAATTCACTGGCAAAGAAGGAAGCAGAAGTTGAGCAGAGAATGAAGATTGGTGCCTCACCAATAACTAGGGATTCGAGGAACAGTGTTGAAAGGCAGAGAATGAGGGCTGGTGTCTCACCAATGCATCCGCAATTGCCGACCATGGGAGATGTCCAGTCACATATCAACCGCAGGCAGCCTAT
GGAAGATGTTGTCAACATAGATGTGCCAAACAATATCACTGGAAAACAAAAGAGAGCAACTTATGGTCAAGACTTTCCAGCAGAGGAGTCAATTGATACAAGTTTGTTTGGCAATGGTTTAGGTGAAATGAAGAAACCGGTGCGCCGACCATCTCCAGATAGAAGATTGTCGTTGGATGGTAATCATACAAAGAACAAAA
TTAAGCATGATATTTTTGAAGAGCAAGATATGAGAAGTTGGCAGGACAAGGTGATGATGAACAAATATCTACCTATCCAGAGTCCAGCTTTGCAAGATGATGTATTGAGATCTTGGGAAGCCCGTGAACTGGAAAAACCAGACAATCCTTCGGAACTATATAACCAAATATACCATGCCAATCCAAGAAAGATTCATCCA
GATTGCGAAGAAGAGAAATTGATACTGCAGCAGCTTCATGAGATGCACGGGGTAATTAAAAGCAGAAGACCTGTTAGGAAAGACAAACGTGAGTATGATGGGCGAAGAACTCCTTATGAAGCTGCAACTACTGATGAATCAGAGGTTGAAATTGATGCAAGAAGCAAAGATGACTATCTAACAAGTGATTCATCAGAAGC
AGATCTTCTCTGGCAATTCAAGGTACCAAATGTGGCTGCTGTGACCCCAGTTGAACATGCCTCACTGATCAAGAAGCCACCGCAGAGGATGTCGAAGACTCCTGAGCGAAGAAGTCCAAGCCAATCTCAAGGCCCTCCTGGAGCAGTTAAGCTTGAGCGTAAGCTGTCAAATGGCACTGCGCAATCACAAGGTCGAACAG
GAAGGTTGCCTTCTGGAGGAATAGAAGGGAAGCGATCTTCAACTGGGGGAAAATTCAAGCGTGAATCCAGAGTAGTTCCAAgtaagtagcctcctccagtaaattttaatcaggtagttcttaacgaacgtaagagcatgaacccataacatcaactgcctcttcaacggaactggaaaccagctcggaagttgctcatg
ctgcacaatttgttttgatttccattggtccccagTTACATCTGAAGGATCAGCTGTAGAGTATTATACAAAGAAGACTTTGACCTGTCAGACAGTTATATCTCCGTTTGGAGTTTCATCCAGGTCATCCAAAAGTCGGCAATAATAGTGCTGCTGGTGCTGTTTTTCTCCCAGTGATTATACTTACAATTCTTTTAGCT
TCATAGCTATCTGCCTCTCTTCTGATGATATCTCTTGATTGGATTGCAGAGTGTTGTAGAATATGATAGATAGGTAGAAGAGGGCAATAATTTGGTTGCTCCTCCATCTCTTCTAATGTTTATGGTTTTCAGAATAGAGTTGTGACGGCCATGCTCACATGAGATTCGCATGCTACGAGGCAGGGCCTTCTATATTTGCT
TTGCAATGTACCTATTGTAGATTTATCAAAATATAATTGAAATATTCTTTGAGTTTGAGCTCAACTTTCTATGCTCCGATTCTATATGTGCATTTTGAATCACATACTGTTTGTGTCTAAAGAATCCTTCTTCAGCAACACGGAAAATATATTTCTCCAACTCGTAGTAGCACAACATTTATTTCTCCAACTCTTCAGCA
GTGCCTCTTTGGTTGTAATTAGCATCTACTGAAGGCCGATTACGTTTTGGA

Intron 2 GTGCCAAACA ... AATGGTTTAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	64	54	98	94
A2	52.94	36	52	29
A3	61.18	46	79	66
A4	63.2	23	49	30
A5	57.14	15	24	16
A6	62.03	15	16	33
A7	69.34	42	102	88
A8	61.48	47	87	63
A9	66.67	52	125	83
A10	62.46	55	103	80

>TRINITY_DN105286_c0_g1_i6 from sample A5 / Example spliced isoform

TTTGGGGGAGCGAACAAACTAAATATTATTTGGAAAACCGAAGCTGAAGGTTCGGTGAATGCGGTCCGGGAAGGGTTTAGAAGTCCGTGGGATATGATACACATAGCAAGGCCCTTGCATTCATAGCGCAGGGAGCTCGGCCTTCTATATTAGTCTTTTGCGTTGGGACAGGGATCGAATCTCAACAGCTCTCCTTTTCT
TCTTTTTTCTTTTCGAGGCACATACGAAAAACATGGCGGAGCTTTGATCTCCTCGCTTCCGATCACTTGTGTAGGGAGTAGGCCGAGCTCGCAGGAGGTCCAGGGATCAAACCTCTAATGGCGACGGCAGAGAGTCTTCTTGCCTTGGCACTGGCATTCGATTCCAGCACCACTTCTTCTTCTTCTTCCATTTACACAGA
CGTAAGTGGGGTAACCGACGATGCCGCCTACCAGGGGACGACTAGACTCAGCGATGTGGATTTGGCATCCAGAAGAGCCGAAGAAGCAGCATCTCGAAGGTACCAGGCCGCAGGATGGCTGAGGAAGATGGTTGGAGTCGTTGCGTCGAAGGATTTGCCGAACGAGCCATCGGAGGAGGAGTTTCGCCTTGGCTTGCGAA
ATGGACTCCTCCTCTGCAATGTTATCAACAAAGTTCATCCAGGCTCTGTTCCAAAGGTGGTGGAGAATCCAGCTGCATTACCTCCTCCTGACGGAGCGGCTCTATCAGCTTATCAGTATTTTGAAAATGTGAGGAACTTCCTTGTCGCAGTTCAAGAACTGAACCTCCCAACCTTTGAAGCGTCTGATTTGGAAAAGGGG
GGATCGTCAGCGAAAGTTGTGAACTGCATTTTAGCTTTGAAAGCATATAGTGATTGGAAGCAAACTGGTGGAAATGGTTTTTGGAAATATGGGGGTAACTTGAAGCCCCCCAGTGTGGCAAAACCCCCCATTAAACCGGGGAGAAACACTGATCCATTCACCCAGTCTATATTGAAGAATTATCAGCCGCCTGCAGATTC
AAGCACGCTACTGAATAATCTTGGTTTAAACTTTCCTGAACGACTTCTTGCCAGAGAGAATTTGATTCAGGATCAATCCTTAAATTCAACTGCGATGGATCCTTCGTCACAATCACTTAATAGGCTCATTCTTTCAATCCTGTCTGACAAAAAGCCAGAAGAAGTGCCTACACTTGTGCAATCTATGTTAGCAAAAGTAA
TGGAAGAGTTTGAGCGACGTCTAGCCACGCAGGGTGAGCAGTTGAAGAAGGTTGTAAAGGACCTTGTTGTTAATGGGGACGAAAAGTCTTTTCCAAAGTCAAAAATTTTGGCAGCGCTAGCAACAGTTTCAGGAGAGCCCAAGGTCGATATCAGCGAAGATGAGGGAAAAGAGGAAGTTGATGGTGTTAGACAAGGACAG
CACGAGGACTGCTTCTCTAATATGTCAAGTGATGCAGATGAGTATGAAAAACCTGCTACCAATCTGCAAACACGTTTCGATCTCCAACAAAGGGGAATTGGAGAACTGAAATGGATGCTAAATAACACGAAGGAAGGTGTTCAGTTGATGCAAATGGAATGGAATAAACAATTGTACAATCTTGGAAAGCATATGCGTGG
ACTAGCACAGGCTGCAGCAGGCTACCACAAAGTTCTAGAGGAAAATCGACAACTATACAATCAAGTGCAGGATCTGAAAGGAAGCATAAGGGTGTATTGCCGAGTCAGACCATTCTTGCCTGGCCAAGCCAACAGTCAGAGTACAGTGGATTTTATTGGGGATGATGGTCAGCTTATGATTGCAAATCCTGCAAAGCAAG
GAAAGGATACACGTAAATCTTTCACATTTAACAAAGTTTTTGGAGCATCTGCAACTCAAGAGGAAGTGTTTCTGGATACCCGGCCATTGATCAGATCTGTTCTGGATGGTTACAATGTTTGCATTTTTGCATATGGGCAAACAGGTTCTGGAAAGACATACACAATGACTGGCCCTAAGGTGATTACAGAGGAGAGTTGG
GGTGTGAACTATCGAGCCTTGAATGACTTATTCCAGATATCAAAACAAAGAAAGGATGCCTTTGTATATGAGGTTGCTGTTCAAATGATTGAAATATACAATGAACAAGTCCGGGATCTTCTTGTTTCTGACAGTTCCAATAAAAGATTAGAAATACGCAACAATTCACAGCAGAATGGACTCAATGTGCCGGATGCAAA
TCTAATACCCGTTGCATCTACATCTGCCGTGATCGAGTTAATGAACATTGGACACAAGAACCGTGCTGTGGGAGCAACCGCTTTGAATGATCGGAGCAGCCGTTCTCACAGTGTTTTGACAGTGCATGTTCAGGGCAGAGATCTTGCTTCTGGAACAATTCTTCGAGGGTGTCTTCATCTTGTTGACCTTGCTGGAAGTG
AGAGAGTTGACAAATCCGAGGCCACCGGGGATAGATTAAAGGAAGCACAGCATATTAACAGATCACTTTCAGCTTTAGGAGATGTGATTGCTGCTCTTGCACAAAAGAACTCCCATGTTCCTTACCGAAATAGCAAGCTCACACAACTGCTTCAGGATTCCTTAGGTGGACAGGCAAAAACTCTCATGTTTGTGCACATA
AGTCCCGAATTAGATGCACATGGGGAGACAATCAGCACTCTAAAATTTGCAGAGCGGGTTGCAACCGTTGAACTTGGTGCTGCACGTTCCAACAAGGAAAGCAGTGAGGTTAGGGAGCTGAAGGAACAGATTGCTAGCTTGAAGAATTCACTGGCAAAGAAGGAAGCAGAAGTTGAGCAGAGAATGAAGATTGGTGCCTC
ACCAATAACTAGGGATTCGAGGAACAGTGTTGAAAGGCAGAGAATGAGGGCTGGTGTCTCACCAATGCATCCGCAATTGCCGACCATGGGAGATGTCCAGTCACATATCAACCGCAGGCAGCCTATGGAAGATGTTGTCAACATAGATGTGAAATGAAGAAACCGGTGCGCCGACCATCTCCAGATAGAAGATTGTCGTT
GGATGGTAATCATACAAAGAACAAAATTAAGCATGATATTTTTGAAGAGCAAGATATGAGAAGTTGGCAGGACAAGGTGATGATGAACAAATATCTACCTATCCAGAGTCCAGCTTTGCAAGATGATGTATTGAGATCTTGGGAAGCCCGTGAACTGGAAAAACCAGACAATCCTTCGGAACTATATAACCAAATATACC
ATGCCAATCCAAGAAAGATTCATCCAGATTGCGAAGAAGAGAAATTGATACTGCAGCAGCTTCATGAGATGCACGGGGTAATTAAAAGCAGAAGACCTGTTAGGAAAGACAAACGTGAGTATGATGGGCGAAGAACTCCTTATGAAGCTGCAACTACTGATGAATCAGAGGTTGAAATTGATGCAAGAAGCAAAGATGAC
TATCTAACAAGTGATTCATCAGAAGCAGATCTTCTCTGGCAATTCAAGGTACCAAATGTGGCTGCTGTGACCCCAGTTGAACATGCCTCACTGATCAAGAAGCCACCGCAGAGGATGTCGAAGACTCCTGAGCGAAGAAGTCCAAGCCAATCTCAAGGCCCTCCTGGAGCAGTTAAGCTTGAGCGTAAGCTGTCAAATGG
CACTGCGCAATCACAAGGTCGAACAGGAAGGTTGCCTTCTGGAGGAATAGAAGGGAAGCGATCTTCAACTGGGGGAAAATTCAAGCGTGAATCCAGAGTAGTTCCAAGTAAGTAGCCTCCTCCAGTAAATTTTAATCAGGTAGTTCTTAACGAACGTAAGAGCATGAACCCATAACATCAACTGCCTCTTCAACGGAACT
GGAAACCAGCTCGGAAGTTGCTCATGCTGCACAATTTGTTTTGATTTCCATTGGTCCCCAGTTACATCTGAAGGATCAGCTGTAGAGTATTATACAAAGAAGACTTTGACCTGTCAGACAGTTATATCTCCGTTTGGAGTTTCATCCAGGTCATCCAAAAGTCGGCAATAATAGTGCTGCTGGTGCTGTTTTTCTCCCAG
TGATTATACTTACAATTCTTTTAGCTTCATAGCTATCTGCCTCTCTTCTGATGATATCTCTTGATTGGATTGCAGAGTGTTGTAGAATATGATAGATAGGTAGAAGAGGGCAATAATTTGGTTGCTCCTCCATCTCTTCTAATGTTTATGGTTTTCAGAATAGAGTTGTGACGGCCATGCTCACATGAGATTCGCATGCT
ACGAGGCAGGGCCTTCTATATTTGCTTTGCAATGTACCTATTGTAGATTTATCAAAATATAATTGAAATATTCTTTGAGTTTGAGCTCAACTTTCTATGCTCCGATTCTATATGTGCATTTTGAATCACATACTGTTTGTGTCTAAAGAATCCTTCTTCAGCAACACGGAAAATATATTTCTCCAACTCGTAGTAGCACA
ACATTTATTTCTCC

>TRINITY_DN105286_c0_g1_i3 from sample A5 / Example unspliced isoform:

TTTGGGGGAGCGAACAAACTAAATATTATTTGGAAAACCGAAGCTGAAGGTTCGGTGAATGCGGTCCGGGAAGGGTTTAGAAGTCCGTGGGATATGATACACATAGCAAGGCCCTTGCATTCATAGCGCAGGGAGCTCGGCCTTCTATATTAGTCTTTTGCGTTGGGACAGGGATCGAATCTCAACAGCTCTCCTTTTCT
TCTTTTTTCTTTTCGAGGCACATACGAAAAACATGGCGGAGCTTTGATCTCCTCGCTTCCGATCACTTGTGTAGGGAGTAGGCCGAGCTCGCAGGAGGTCCAGGGATCAAACCTCTAATGGCGACGGCAGAGAGTCTTCTTGCCTTGGCACTGGCATTCGATTCCAGCACCACTTCTTCTTCTTCTTCCATTTACACAGA
CGTAAGTGGGGTAACCGACGATGCCGCCTACCAGGGGACGACTAGACTCAGCGATGTGGATTTGGCATCCAGAAGAGCCGAAGAAGCAGCATCTCGAAGGTACCAGGCCGCAGGATGGCTGAGGAAGATGGTTGGAGTCGTTGCGTCGAAGGATTTGCCGAACGAGCCATCGGAGGAGGAGTTTCGCCTTGGCTTGCGAA
ATGGACTCCTCCTCTGCAATGTTATCAACAAAGTTCATCCAGGCTCTGTTCCAAAGGTGGTGGAGAATCCAGCTGCATTACCTCCTCCTGACGGAGCGGCTCTATCAGCTTATCAGTATTTTGAAAATGTGAGGAACTTCCTTGTCGCAGTTCAAGAACTGAACCTCCCAACCTTTGAAGCGTCTGATTTGGAAAAGGGG
GGATCGTCAGCGAAAGTTGTGAACTGCATTTTAGCTTTGAAAGCATATAGTGATTGGAAGCAAACTGGTGGAAATGGTTTTTGGAAATATGGGGGTAACTTGAAGCCCCCCAGTGTGGCAAAACCCCCCATTAAACCGGGGAGAAACACTGATCCATTCACCCAGTCTATATTGAAGAATTATCAGCCGCCTGCAGATTC
AAGCACGCTACTGAATAATCTTGGTTTAAACTTTCCTGAACGACTTCTTGCCAGAGAGAATTTGATTCAGGATCAATCCTTAAATTCAACTGCGATGGATCCTTCGTCACAATCACTTAATAGGCTCATTCTTTCAATCCTGTCTGACAAAAAGCCAGAAGAAGTGCCTACACTTGTGCAATCTATGTTAGCAAAAGTAA
TGGAAGAGTTTGAGCGACGTCTAGCCACGCAGGGTGAGCAGTTGAAGAAGGTTGTAAAGGACCTTGTTGTTAATGGGGACGAAAAGTCTTTTCCAAAGTCAAAAATTTTGGCAGCGCTAGCAACAGTTTCAGGAGAGCCCAAGGTCGATATCAGCGAAGATGAGGGAAAAGAGGAAGTTGATGGTGTTAGACAAGGACAG
CACGAGGACTGCTTCTCTAATATGTCAAGTGATGCAGATGAGTATGAAAAACCTGCTACCAATCTGCAAACACGTTTCGATCTCCAACAAAGGGGAATTGGAGAACTGAAATGGATGCTAAATAACACGAAGGAAGGTGTTCAGTTGATGCAAATGGAATGGAATAAACAATTGTACAATCTTGGAAAGCATATGCGTGG
ACTAGCACAGGCTGCAGCAGGCTACCACAAAGTTCTAGAGGAAAATCGACAACTATACAATCAAGTGCAGGATCTGAAAGGAAGCATAAGGGTGTATTGCCGAGTCAGACCATTCTTGCCTGGCCAAGCCAACAGTCAGAGTACAGTGGATTTTATTGGGGATGATGGTCAGCTTATGATTGCAAATCCTGCAAAGCAAG
GAAAGGATACACGTAAATCTTTCACATTTAACAAAGTTTTTGGAGCATCTGCAACTCAAGAGGAAGTGTTTCTGGATACCCGGCCATTGATCAGATCTGTTCTGGATGGTTACAATGTTTGCATTTTTGCATATGGGCAAACAGGTTCTGGAAAGACATACACAATGACTGGCCCTAAGGTGATTACAGAGGAGAGTTGG
GGTGTGAACTATCGAGCCTTGAATGACTTATTCCAGATATCAAAACAAAGAAAGGATGCCTTTGTATATGAGGTTGCTGTTCAAATGATTGAAATATACAATGAACAAGTCCGGGATCTTCTTGTTTCTGACAGTTCCAATAAAAGATTAGAAATACGCAACAATTCACAGCAGAATGGACTCAATGTGCCGGATGCAAA
TCTAATACCCGTTGCATCTACATCTGCCGTGATCGAGTTAATGAACATTGGACACAAGAACCGTGCTGTGGGAGCAACCGCTTTGAATGATCGGAGCAGCCGTTCTCACAGTGTTTTGACAGTGCATGTTCAGGGCAGAGATCTTGCTTCTGGAACAATTCTTCGAGGGTGTCTTCATCTTGTTGACCTTGCTGGAAGTG
AGAGAGTTGACAAATCCGAGGCCACCGGGGATAGATTAAAGGAAGCACAGCATATTAACAGATCACTTTCAGCTTTAGGAGATGTGATTGCTGCTCTTGCACAAAAGAACTCCCATGTTCCTTACCGAAATAGCAAGCTCACACAACTGCTTCAGGATTCCTTAGGTGGACAGGCAAAAACTCTCATGTTTGTGCACATA
AGTCCCGAATTAGATGCACATGGGGAGACAATCAGCACTCTAAAATTTGCAGAGCGGGTTGCAACCGTTGAACTTGGTGCTGCACGTTCCAACAAGGAAAGCAGTGAGGTTAGGGAGCTGAAGGAACAGATTGCTAGCTTGAAGAATTCACTGGCAAAGAAGGAAGCAGAAGTTGAGCAGAGAATGAAGATTGGTGCCTC
ACCAATAACTAGGGATTCGAGGAACAGTGTTGAAAGGCAGAGAATGAGGGCTGGTGTCTCACCAATGCATCCGCAATTGCCGACCATGGGAGATGTCCAGTCACATATCAACCGCAGGCAGCCTATGGAAGATGTTGTCAACATAGATgtgccaaacaatatcactggaaaacaaaagagagcaacttatggtcaagact
ttccagcagaggagtcaattgatacaagtttgtttggcaatggtttagGTGAAATGAAGAAACCGGTGCGCCGACCATCTCCAGATAGAAGATTGTCGTTGGATGGTAATCATACAAAGAACAAAATTAAGCATGATATTTTTGAAGAGCAAGATATGAGAAGTTGGCAGGACAAGGTGATGATGAACAAATATCTACCT
ATCCAGAGTCCAGCTTTGCAAGATGATGTATTGAGATCTTGGGAAGCCCGTGAACTGGAAAAACCAGACAATCCTTCGGAACTATATAACCAAATATACCATGCCAATCCAAGAAAGATTCATCCAGATTGCGAAGAAGAGAAATTGATACTGCAGCAGCTTCATGAGATGCACGGGGTAATTAAAAGCAGAAGACCTGT
TAGGAAAGACAAACGTGAGTATGATGGGCGAAGAACTCCTTATGAAGCTGCAACTACTGATGAATCAGAGGTTGAAATTGATGCAAGAAGCAAAGATGACTATCTAACAAGTGATTCATCAGAAGCAGATCTTCTCTGGCAATTCAAGGTACCAAATGTGGCTGCTGTGACCCCAGTTGAACATGCCTCACTGATCAAGA
AGCCACCGCAGAGGATGTCGAAGACTCCTGAGCGAAGAAGTCCAAGCCAATCTCAAGGCCCTCCTGGAGCAGTTAAGCTTGAGCGTAAGCTGTCAAATGGCACTGCGCAATCACAAGGTCGAACAGGAAGGTTGCCTTCTGGAGGAATAGAAGGGAAGCGATCTTCAACTGGGGGAAAATTCAAGCGTGAATCCAGAGTA
GTTCCAAGTAAGTAGCCTCCTCCAGTAAATTTTAATCAGGTAGTTCTTAACGAACGTAAGAGCATGAACCCATAACATCAACTGCCTCTTCAACGGAACTGGAAACCAGCTCGGAAGTTGCTCATGCTGCACAATTTGTTTTGATTTCCATTGGTCCCCAGTTACATCTGAAGGATCAGCTGTAGAGTATTATACAAAGA
AGACTTTGACCTGTCAGACAGTTATATCTCCGTTTGGAGTTTCATCCAGGTCATCCAAAAGTCGGCAATAATAGTGCTGCTGGTGCTGTTTTTCTCCCAGTGATTATACTTACAATTCTTTTAGCTTCATAGCTATCTGCCTCTCTTCTGATGATATCTCTTGATTGGATTGCAGAGTGTTGTAGAATATGATAGATAGG
TAGAAGAGGGCAATAATTTGGTTGCTCCTCCATCTCTTCTAATGTTTATGGTTTTCAGAATAGAGTTGTGACGGCCATGCTCACATGAGATTCGCATGCTACGAGGCAGGGCCTTCTATATTTGCTTTGCAATGTACCTATTGTAGATTTATCAAAATATAATTGAAATATTCTTTGAGTTTGAGCTCAACTTTCTATGC
TCCGATTCTATATGTGCATTTTGAATCACATACTGTTTGTGTCTAAAGAATCCTTCTTCAGCAACACGGAAAATATATTTCTCCAACTCGTAGTAGCACAACATTTATTTCTCC