sp|Q42404|RU17_ARATH ----> U1 small nuclear ribonucleoprotein 70 kDa
Intron 1 GTAATTTCTT ... TGATATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 41.48 | 103 | 73 | 21 |
| A2 | 48.74 | 61 | 58 | 13 |
| A3 | 51.85 | 65 | 70 | 24 |
| A4 | 46.38 | 37 | 32 | 12 |
| A5 | 47.22 | 19 | 17 | 2 |
| A6 | 46.82 | 251 | 221 | 39 |
| A7 | 43.37 | 410 | 314 | 66 |
| A8 | 47.98 | 619 | 571 | 112 |
| A9 | 49.66 | 375 | 370 | 53 |
| A10 | 42.43 | 350 | 258 | 54 |
>TRINITY_DN47880_c0_g1_i1 from sample A7 / Example spliced isoformGAAAGATCTCAGCCTCGTGATAAAGAAAGAGATAGAGATCACATTGAAAGATCTCAGCCTCGTGATAAAGAAAGAGATAGAGATCACATTGAAAGATCTCAGCCTCGTGATAAAGAAAGAGATAGAGATCCCATAGAAAGATCTCATTCACATGATTATGAACGGGAGAGGTGAACGACTTCATAAAGGTTTTTTACAGT
AGGTAAAAAGGGTGAGGACATATTATTCTTTTACAGCATTTTATTTTTGCCACAAACTATGAGAATATGACAAGACTTCATGTGTAGGCAGTAATGGAACCCGTAGTGGCTCTGATAGAGGTGTGTTCAGAAGTTATAAAACACTGGATTTACAGACTGGCATATAGATTTTTGGGGAGTAGTTCAAAGCTGATGCCAAA
TGGTTATGCAAATGTTAGGATTATTATGGAGATGTCGATTGCCCTTTAAAATCGTTCAATCATTCGATTCTTCCACCATTTTCTTCTAATGTGATCCTGGCAAGTGCAGTGTAAGAGCTGGCGTTTTTAATGAATTCAACAAAATGAAATTTTAACTGGCTTATTTTATTTGGTAAGATGAAAAGTATAGTTTTCATTCA
GTGGCAGCGCGTTCTTTTTGAAAAACACAATATCCATTATATTAGGGGTGAGTGCCCAGTGCCTAGTGCCCTTGGTATGCATCTCTTATGGCGCATATCTTATGGCTTATAATGTCGGGGCTTAGAATGCTTTGGTGCATTGTTATTACTTGATAAAAAATGTGAAGATTTTAGTTTTGCACATTTGCATGTTTGCAAGG
AGGACTGGGGATAAATTTACAATAGCTTTCTTCCTTTTAATCTTTATTATATTCTATATTTGTCTGTGGTAAATGGACTGGCACAAACTGAGCATAGAGATCCTTCATGCATGCAATTATACAATCTTAGAAAGGTGGGGATTTTTGTCTTTTGCACGATTCTAGACTCTTTGAGGTATTTATTACACACAGACACACAC
GTTATGCTCAATCTGAGGTTGAAAGGCATAGGTATTCATCTCCGAGTTGAAGACTAATGTTTTCTATTACACGACATTGAAGGTAGTTTTCAATATTCTGTTCCCACCATTCTCCACTCTTTTTTCACCACTTTTCTGTCTGCTATTATGATTGAGAATGTTCAGCTTCATCTTGTCAATAAAATGTACCAATAATCATT
ATCCTTGATCATTTAAAGGATGTGAAGATGCAGTCCAGGTTCATCTCCTTTTGTTTCACAATATTTATATACACTTTTAAGATCCAGCTCCAAAATTTATTGCCGAATATGATGCTTAGCAATGTCTCATTCCTCCAAAATAATCA
>TRINITY_DN47880_c0_g1_i2 from sample A7 / Example unspliced isoform:GAAAGATCTCAGCCTCGTGATAAAGAAAGAGATAGAGATCACATTGAAAGATCTCAGCCTCGTGATAAAGAAAGAGATAGAGATCACATTGAAAGATCTCAGCCTCGTGATAAAGAAAGAGATAGAGATCCCATAGAAAGATCTCATTCACATGATTATGAACGGGAGAGGTGAACGACTTCATAAAGGTTTTTTACAGT
AGGTAAAAAGGGTGAGGACATATTATTCTTTTACAGCATTTTATTTTTGCCACAAACTATGAGAATATGACAAGACTTCATGTGTAGGCAGTAATGGAACCCGTAGTGGCTCTGATAGAGGTGTGTTCAGAAGTTATAAAACACTGGATTTACAGACTGGCATATAGATTTTTGGGGAGTAGTTCAAAGCTGATGCCAAA
TGGTTATGCAAATGTTAGGATTATTATGGAGATGTCGATTGCCCTTTAAAATCGTTCAATCATTCGATTCTTCCACCATTTTCTTCTAATGTGATCCTGgtaatttcttcaacaattcacatgaaaacttatatgtgccttatcttttgggtggcattaccatgattacactcatctttcatttgtttcatctgcaagta
ctgtgaatttagtgtttctagaatttatactgatccatatggaaattttacatgcatcaatggaattttctatatatttgttaagtttatgttgaaaagtgtggggatatggttacttgtttccactaatcaaaatcctgtagattgcatatggtatatgtgaggtcatgttccttgttatgtctgtcagcaggatcatt
ttattcccctaacgtttggatttaatagagaagtttggttcaataaataaatgtattagttttcctatatagattttgcattcgttacatagaagtgcttgtttaccaatgcagatatgataaatatactgctattaaagcttgataattccatggaactctagcctttcttaattcaattgttttgatatgcagGCAAG
TGCAGTGTAAGAGCTGGCGTTTTTAATGAATTCAACAAAATGAAATTTTAACTGGCTTATTTTATTTGGTAAGATGAAAAGTATAGTTTTCATTCAGTGGCAGCGCGTTCTTTTTGAAAAACACAATATCCATTATATTAGGGGTGAGTGCCCAGTGCCTAGTGCCCTTGGTATGCATCTCTTATGGCGCATATCTTATG
GCTTATAATGTCGGGGCTTAGAATGCTTTGGTGCATTGTTATTACTTGATAAAAAATGTGAAGATTTTAGTTTTGCACATTTGCATGTTTGCAAGGAGGACTGGGGATAAATTTACAATAGCTTTCTTCCTTTTAATCTTTATTATATTCTATATTTGTCTGTGGTAAATGGACTGGCACAAACTGAGCATAGAGATCCT
TCATGCATGCAATTATACAATCTTAGAAAGGTGGGGATTTTTGTCTTTTGCACGATTCTAGACTCTTTGAGGTATTTATTACACACAGACACACACGTTATGCTCAATCTGAGGTTGAAAGGCATAGGTATTCATCTCCGAGTTGAAGACTAATGTTTTCTATTACACGACATTGAAGGTAGTTTTCAATATTCTGTTCC
CACCATTCTCCACTCTTTTTTCACCACTTTTCTGTCTGCTATTATGATTGAGAATGTTCAGCTTCATCTTGTCAATAAAATGTACCAATAATCATTATCCTTGATCATTTAAAGGATGTGAAGATGCAGTCCAGGTTCATCTCCTTTTGTTTCACAATATTTATATACACTTTTAAGATCCAGCTCCAAAATTTATTGCC
GAATATGATGCTTAGCAATGTCTCATTCCTCCAAAATAATCA