NA ----> NA
Intron 1 GTAAAATAAA ... TTCGTTGAAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 55.26 | 17 | 23.6 | 21 |
| A2 | 30 | 14 | 3.6 | 6 |
| A3 | 41.86 | 25 | 6.4 | 18 |
| A4 | 36.07 | 39 | 10.9 | 22 |
| A5 | 43.75 | 18 | 7.3 | 14 |
| A6 | 28.12 | 151.1 | 63.1 | 59.1 |
| A7 | 31.82 | 135 | 55.6 | 63 |
| A8 | 34.8 | 122 | 46.3 | 65.1 |
| A9 | 24.06 | 101 | 30.7 | 32 |
| A10 | 35.38 | 84 | 39.7 | 46 |
>TRINITY_DN72140_c0_g1_i2 from sample A1 / Example spliced isoformGAGTTTTCATATCCATCTGGTATTGTATTGGACAAAGCTTTTTGTATTTTATGGGGAGGTGAGGGGATCGAATCCCATGGCAAGGTGGGTTCAAGCCGCCGCGGGCACGACGAACTGGCTCGCCGGCACGGACTGTTTCCTGCTGGCGGTCACATGGGTGCTGGCAGTGGCTGCTGTAGTCACCGCATCTTGCACAACGT
ACTGGCACTTCCACCATAGAAGGGACGATAAAACTAGTACTACTGCTACCACAAGCAGTTCGGATTCGACAGCCCGTGGTTTCGCCGGTTTCAAGTTTACGCACAATTGCCCAGGTCGGGCGCTTATCAACAGCTCCAAAAAGCTGTTGATTTCTGTGAAATGGTGGCAAAGAGAAAAGGAAGATGAGGTGAAAGCATAT
GACTGTGCCGCTATGGAGGAGGAAGGCAGAGGAGGAGATTTCCTGTGGCAGAGGAGAATTCTGATGGGCGAACGGTGCCAGCCCCCGGATTTCTCAGGTGTCATAATTTACGACGATAAGGGAAACCAGTTGTCTGAATTCCCTGCGCGCTCTCCCAGGCCCAACATATTTCATCCTTCACGCGACCAGTCGGACGCCAT
TCAACAGCGATAACAAAAATTTTAACGGGGCAAGAAGAGTTCGTTTCCCTCCATGTGACCGTGGGGCTTGGCGCAATCTTTAGGTTTGGCTTTAATTTTTCTGATTGTAATTCCGTCGCGTGTGGAGCATTTCGTCCAGAAACAGAGACGCGAATGTTAGTGTTGTTACAGTCATGATATATTGGGGAGGATATAGTTAT
AATTAATGAAGTTGATCAACCGCCAAAAAGAGGGCTCTTAGAGTTGTTCTTGGCTCTACCTGTGAAGTTTACCTCTAAAATATTCCCAAATTTAGTACCTCTAAAATATTCCCAAATTTAGTACCTCTAAAATATTCCCAAATT
>TRINITY_DN72140_c0_g1_i1 from sample A1 / Example unspliced isoform:GAGTTTTCATATCCATCTGGTATTGTATTGGACAAAGCTTTTTGTATTTTATGGGGAGGTGAGGGGATCGAATCCCATGGCAAGGTGGGTTCAAGCCGCCGCGGGCACGACGAACTGGCTCGCCGGCACGGACTGTTTCCTGCTGGCGGTCACATGGGTGCTGGCAGTGGCTGCTGTAGTCACCGCATCTTGCACAACGT
ACTGGCACTTCCACCATAGAAGGGACGATAAAACTAGTACTACTGCTACCACAAGCAGTTCGGATTCGACAGCCCGTGGTTTCGCCGGTTTCAAGTTTACGCACAATTGCCCAGGTCGGGCGCTTATCAACAGCTCCAAAAAGCTGTTGATTTCTGTGAAATGGTGGCAAAGAGAAAAGGAAGATGAGGTGAAAGCATAT
GACTGTGCCGCTATGGAGGAGGAAGGCAGAGGAGGAGATTTCCTGTGGCAGAGGAGAATTCTGATGGGCGAACGGTGCCAGCCCCCGGATTTCTCAGGTGTCATAATTTACGACGATAAGGGAAACCAGTTGTCTGAATTCCCTGCGCGCTCTCCCAGGCCCAACATATTTCATCCTTCACGCGACCAGgtaaaataaac
acaaatttaagatttacaattttttttgctttggaaacatttttgcttcttgattttgttaatcgatctctgtaaataatgttctgtggaccgtggtaaattcgttgaagTCGGACGCCATTCAACAGCGATAACAAAAATTTTAACGGGGCAAGAAGAGTTCGTTTCCCTCCATGTGACCGTGGGGCTTGGCGCAATCT
TTAGGTTTGGCTTTAATTTTTCTGATTGTAATTCCGTCGCGTGTGGAGCATTTCGTCCAGAAACAGAGACGCGAATGTTAGTGTTGTTACAGTCATGATATATTGGGGAGGATATAGTTATAATTAATGAAGTTGATCAACCGCCAAAAAGAGGGCTCTTAGAGTTGTTCTTGGCTCTACCTGTGAAGTTTACCTCTAAA
ATATTCCCAAATTTAGTACCTCTAAAATATTCCCAAATTTAGTACCTCTAAAATATTCCCAAATT