sp|P10978|POLX_TOBAC ----> Retrovirus-related Pol polyprotein from transposon TNT 1-94
Intron 1 GTATATGTCA ... TGTTAATTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 89.19 | 2 | 4 | 29 |
| A2 | 78.57 | 3 | 5 | 17 |
| A3 | 77.78 | 4 | 12 | 16 |
| A4 | 100 | 0 | 4 | 3 |
| A5 | 33.33 | 1 | 0 | 1 |
| A6 | -1 | 0 | 0 | 0 |
| A7 | 37.5 | 5 | 0 | 6 |
| A8 | 42.86 | 2 | 0 | 3 |
| A9 | 41.18 | 10 | 9 | 5 |
| A10 | 100 | 0 | 0 | 2 |
>TRINITY_DN42280_c3_g1_i4 from sample A9 / Example spliced isoformAAGATAGCACTCTTTCAATCATCATTCCATATTTCTTCAGAACATTTTCCCAAGACTAGAGAAGAAGAAGAAGACATGTCTCGTGTTCCTTATGCTAGTGCAATTGGAAGTTTGATGTATGTCATGGTATGCACTAGACCAGAAATTGCCCATGCAGTGGGATTTTTGATCAGGCTGGAGATCTGGATTGTACAAGATCT
ACAAGTGGGTATTTGTTGAACCTATTTGGAGGTGCTATCAGTTGGATGAGTAAGAAACAAGTTGTAGTGGCACTGTCAACTACAGAAGCTTAATACATGGAAACCACTCATGAAATTAAAGAGGTTGTATGGTTGCAGATATTGTGTTCAAACATTGGGTTTGAACATCAAGATGTGAGGTTAGATTGTGACAATCAGAG
TGCAATATTCTTGGCAAAGAACCTTGCTTATCACTAAAAAATGAAGCATATTGATATGCAATATCACTTTGCACAAGACATGGTTGAAAGAAAGAAGGTGTTGTTGGAGAAAGTTGACACTTTAGAGAATGTTGTAGATTCATTGACAAAATCTGTGATCATTGAGAAGTTTTCTTGGCGTAGAGAAGTAATGGGCATTC
ATGCTCTGTATTATTGATCTAATAAAATCATGTACTCTCTATATGAAGAGAAAAAAACAAGTGGGATAATGTTGGGTATGTGTTAATATTATCTATGTGACTAGCCCCCTTCTGACAGGGGTTCAAGGGCTAGCCCCCGAATGAAGGGGGTAAAAAAAAATTGGGTTGTTTTTTGTTGTTTTCGG
>TRINITY_DN42280_c3_g1_i1 from sample A9 / Example unspliced isoform:AAGATAGCACTCTTTCAATCATCATTCCATATTTCTTCAGAACATTTTCCCAAGACTAGAGAAGAAGAAGAAGACATGTCTCGTGTTCCTTATGCTAGTGCAATTGGAAGTTTGATGTATTCCATGGTATGCACTAGACCAGACATTGCCAATGCAATGGGATTTTTGATCAGgtatatgtcaaaatttggaaaggagca
ttggaaaactataaagatggtgttaagctatttatgtggaactacaaatagtgcaattttttatcaaggaagagatggataggactgagtgttgaatgtacatggttttgttgatgttaattagGCTGGAGATCTGGATTGTACAAGATCTACAAGTGGGTATTTGTTGAACCTATTTGGAGGTGCTATCAGTTGGATGA
GTAAGAAACAAGTTGTAGTGGCACTGTCAACTACAGAAGCTTAATACATGGAAACCACTCATGAAATTAAAGAGGTTGTATGGTTGCAGATATTGTGTTCAAACATTGGGTTTGAACATCAAGATGTGAGGTTAGATTGTGACAATCAGAGTGCAATATTCTTGGCAAAGAACCTTGCTTATCACTAAAAAATGAAGCAT
ATTGATATGCAATATCACTTTGCACAAGACATGGTTGAAAGAAAGAAGGTGTTGTTGGAGAAAGTTGACACTTTAGAGAATGTTGTAGATTCATTGACAAAATCTGTGATCATTGAGAAGTTTTCTTGGCGTAGAGAAGTAATGGGCATTCATGCTCTGTATTATTGATCTAATAAAATCATGTACTCTCTATATGAAGA
GAAAAAAACAAGTGGGATAATGTTGGGTATGTGTTAATATTATCTATGTGACTAGCCCCCTTCTGACAGGGGTTCAAGGGCTAGCCCCCGAATGAAGGGGGTAAAAAAAAATTGGGTTGTTTTTTGTTGTTTTCGG