sp|Q8VZ14|RMR2_ARATH ----> Receptor homology region, transmembrane domain- and RING domain-containing protein 2

Intron 1 GTAACAAAGA ... CGATTGAAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	46.21	39	32	35
A2	49.33	38	27	47
A3	51.76	41	53	35
A4	41.72	44	39	24
A5	48.84	33	42	21
A6	40.51	58	41	38
A7	48.36	63	60	58
A8	43.4	30	18	28
A9	43.68	49	40	36
A10	41.09	81	65	48

>TRINITY_DN114037_c0_g1_i8 from sample A1 / Example spliced isoform

GCCGCCGGCGCCGGGCATGCAAATTGCCCTCAACTATAGCTTAAAGAGATTTTACTACCACATTCCATTGGGCCAGCTGCCTGTCGATGTTGGACCCACTTATCGGGAAACTTCGCGTGTGCGGTGGGCCCAAGACGCAACGACGAAGAACCGGGCGAGCCGGTTTGGGAGCGTTCGGCGGAGATGCTGCGGCGAATCCG
AGATTGGGCGGGGAGCGTCGATCTCGATCTGATTATGATTATGATTATGATTCTGAGGAGGAAAGATATGAATAATAAGTAGAAAAGCGTATACTTGGTGGGGTAAATCATAGGGGTCTGGAAATGTTTTCATATTAGTGGTAGGCAATGGAGGAGGCCGGGGACGCTATGGAAGCGGATGTGTTGATCAAGGATAGACA
GAAACAGAAAGAGACACAGATAACATTTTTATTCAAATCCACAGATTCTTCTTTTCTGCCGATCCGCCTCGGTGTCGGTCTTCTTCCATTCCTGGGAAGGCTATAATAGAATAGGAGGCATCCTTGTAGGAGGGAGTATTCTGTGACTATCTAAATGCTTTTGTGGTAATGAAACATCGAGAGGTGATTTTCAGTGTGGT
GTGCAATGAAGCAGGGTCATTTATAGTGGAAGTTGGGGTTAAATGGAGCAGAGAATCAGAACTCCAAATGTTTTTCCGACAGTGAAACGTGTAAATTGGTGACCTTTAGTCTGTCATTCAGTGAAGAAGGGATATACAGTGTAAGTTGGGTCGTGTGTCTAAAATGGAGCAGAGGACATTAAAGAGGCACACGGGAGGAT
TAACAACAATAGGATTGTTGTATCTTTTTTCTCTACTTTCAGGGGGGTCGTCTGCAAATGTGGTCCTGATTGGCAGCAACATATCTCAATCATTTGATGGTATTGAAGCAAACTTTGCTCCGGCAATTAGAGGATCAGGAGCTTGCAGTGTTTTACAACTTGCTGAACCTTTTGATGCCTGTACACCACTCACTAACAAA
GCAATCTCACGTGAAGGTGTATATGCCCCATTTGCTCTAATAATCCGGGGTACATGCACCTTTGAGAAGAAGGTTAGAAATGCACAAGCTGCAGGATTTAGTGCAGCCATTGTCTACAACAATGAAGATAGTACTGATCTTGTTTCAATGGCTGGAAATTCAGATGGTGTCACAATTCATGCAGTGTTTGTCTCTAAAGC
AGCAGGAGAAATGCTTTTGAAACATGTTGGAGACCCAAATATGGAATTTTGGCTTGTACCTTCATATGAGAACACAGCATGGTCAGTAATGGCGATTGCTTTCATCTCCCTTCTCGCTATATGTGCTGTGCTTGCAACTTGTTTCTTTGTGCGAAGGCATCGATTAAGACATTCTGGACATCGTTCACGTGTTCGTGAAT
TTCATGGTATGAGTGGTCGATTAGTGAAAGCAATGCCTAGTATGATATTCAGTTCAGTGGTGGATGACAACTGCACATCTGAGACCTGTGCAATATGTCTTGAAGACTATAAAGCTGGGGAGAAATTGCGTATCCTCCCATGCCACCACAAATTCCATGTGCTCTGCATAGACTCCTGGCTCACAATGTGGCGGACATTT
TGTCCAGTATGCAAGCGTGATGCAAGGATAAACACAGGTGAACTTCCAGCTTCAGAAAACACCCCTCTCCTATCTTCATCCTTGTCATTATCTGCTCCACTTTTGTCAGTTAGTGCATCATCTGAGTCATCTCTAATCGGGTCTCCAGCTATGCTTATACCTTCAAGCTCTCTACGATCTCCTGCTACATCATCTTATAT
GGTTTCATATTCTGGTGCTTCTCGTAATGGTTCATCATACTTGCCACAATCAATTGGTTCCCATTGTATATCCCCTGTATCCAGCAGAAATTCTGTTAACATTGGAAATACATCCTATGTTTCTCACCACCTGTCTTTTCAGTCCTTAAATGTTCAGCCATCATTATTCTCACGTCCTAACTCCTTAGACATGTATGGTA
CCTCTCCACAAATGACTCCCCAGTCGTTTAGTTCCAGATATGCTTCATTCATCCCAGGCTCTTGCACTGCATCACCACACATTGCTAATTCACGCAGTCGACCTCCACGTGTACCACGCATGCCTTCCTATAGTGGCGTGCCATCTTATTGCGGGTCATTGACAAGCATCTCCCCATTTACATCTACAAGATCCTTACCA
GTTTATCAAGACGAGACAAGATAGTGTGGTAGCGTTATCAGAAATGGCTCTGAATATTATAATGTGAGGACCTCCGTATAAGAGTTTCCAGACAAATCCTGATTTCTGAGTTATGTTAAGACATCAATCTGTAAATACAGGTTTGCATAGTAGGAATCTGTTTGATGTGGCACTTCAAAATCTTGAACCTGTATGTTCAT
TAAAGCATGAGCGTGTGCATTCCCTTTCTGAGGGTTGGGTCAAATGCCTTGTAGGCTTGTATTATTAGTTGTATATCAGAAATTTAGAACTATGTGGACTTTCTTGGGGTCTATCCAAAGAGTAATGTGTGATTTACTTTGTCA

>TRINITY_DN114037_c0_g1_i2 from sample A1 / Example unspliced isoform:

GCCGCCGGCGCCGGGCATGCAAATTGCCCTCAACTATAGCTTAAAGAGATTTTACTACCACATTCCATTGGGCCAGCTGCCTGTCGATGTTGGACCCACTTATCGGGAAACTTCGCGTGTGCGGTGGGCCCAAGACGCAACGACGAAGAACCGGGCGAGCCGGTTTGGGAGCGTTCGGCGGAGATGCTGCGGCGAATCCG
AGATTGGGCGGGGAGCGTCGATCTCGATCTGATTATGATTATGATTATGATTCTGAGGAGGAAAGATATGAATAATAAGTAGAAAAGCGTATACTTGGTGGGGTAAATCATAGGGGTCTGGAAATGTTTTCATATTAGTGGTAGGCAATGGAGGAGGCCGGGGACGCTATGGAAGCGGATGTGTTGATCAAGGATAGACA
GAAACAGAAAGAGACACAGATAACATTTTTATTCAAATCCACAGATTCTTCTTTTCTGCCGATCCGCCTCGGTGTCGGTCTTCTTCCATTCCTGGGAAGgtaacaaagaaattaaaaagtccctagttttcatgtttatgtgagcgtttctagggttctcgggtttgttcgagctctgatccgaggggatcaagctacta
agacttcaaaattatatctttccttttcttaagaagcctcgtaaacggggacagtgccacatgatcttgaaaatatttggtgttttacgttggatttcgatcgattgaaagGCTATAATAGAATAGGAGGCATCCTTGTAGGAGGGAGTATTCTGTGACTATCTAAATGCTTTTGTGGTAATGAAACATCGAGAGGTGAT
TTTCAGTGTGGTGTGCAATGAAGCAGGGTCATTTATAGTGGAAGTTGGGGTTAAATGGAGCAGAGAATCAGAACTCCAAATGTTTTTCCGACAGTGAAACGTGTAAATTGGTGACCTTTAGTCTGTCATTCAGTGAAGAAGGGATATACAGTGTAAGTTGGGTCGTGTGTCTAAAATGGAGCAGAGGACATTAAAGAGGC
ACACGGGAGGATTAACAACAATAGGATTGTTGTATCTTTTTTCTCTACTTTCAGGGGGGTCGTCTGCAAATGTGGTCCTGATTGGCAGCAACATATCTCAATCATTTGATGGTATTGAAGCAAACTTTG

Intron 2 GCTATAATAG ... AATGAAGCAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	74.77	14	35	48
A2	72.22	20	47	57
A3	65.57	21	35	45
A4	57.63	25	24	44
A5	73.68	10	21	35
A6	72.93	18	38	59
A7	67.57	36	58	92
A8	78.26	10	28	44
A9	69.4	28	36	91
A10	77.92	17	48	72

>TRINITY_DN105078_c2_g5_i1 from sample A4 / Example spliced isoform

TGCCTGTCGATGTTGGACCCACTTATCGGGAAACTTCGCGTGTGCGGTGGGCCCAAGACGCAACGACGAAGAACCGGGCGAGCCGGTTTGGGAGCGTTCGGCGGAGATGCTGCGGCGAATCCGAGATTGGGCGGGGAGCGTCGATCTCGATCTGATTATGATTATGATTATGATTCTGAGGAGGAAAGATATGAATAATA
AGTAGAAAAGCGTATACTTGGTGGGGTAAATCATAGGGGTCTGGAAATGTTTTCATATTAGTGGTAGGCAATGGAGGAGGCCGGGGACGCTATGGAAGCGGATGTGTTGATCAAGGATAGACAGAAACAGAAAGAGACACAGATAACATTTTTATTCAAATCCACAGATTCTTCTTTTCTGCCGATCCGCCTCGGTGTCG
GTCTTCTTCCATTCCTGGGAAGGTAACAAAGAAATTAAAAAGTCCCTAGTTTTCATGTTTATGTGAGCGTTTCTAGGGTTCTCGGGTTTGTTCGAGCTCTGATCCGAGGGGATCAAGCTACTAAGACTTCAAAATTATATCTTTCCTTTTCTTAAGAAGCCTCGTAAACGGGGACAGTGCCACATGATCTTGAAAATATT
TGGTGTTTTACGTTGGATTTCGATCGATTGAAAGGGTCATTTATAGTGGAAGTTGGGGTTAAATGGAGCAGAGAATCAGAACTCCAAATGTTTTTCCGACAGTGAAACGTGTAAATTGGTGACCTTTAGTCTGTCATTCAGTGAAGAAGGGATATACAGTGTAAGTTGGGTCGTGTGTCTAAAATGGAGCAGAGGACATT
AAAGAGGCACACGGGAGGATTAACAACAATAGGATTGTTGTATCTTTTTTCTCTACTTTCAGGGGGGTCGTCTGCAAATGTGGTCCTGATTGGCAGCAACATATCTCAATCATTTGATGGTATTGAAGCAAACTTTGCTCCGGCAATTAGAGGATCAGGAGCTTGCAGTGTTTTACAACTTGCTGAACCTTTTGATGCCT
GTACACCACTCACTAACAAAGCAATCTCACGTGAAGGTGTATATGCCCCATTTGCTCTAATAATCCGGGGTACATGCACCTTTGAGAAGAAGGTTAGAAATGCACAAGCTGCAGGATTTAGTGCAGCCATTGTCTACAACAATGAAGATAGTACTGATCTTGTTTCAATGGCTGGAAATTCAGATGGTGTCACAATTCAT
GCAGTGTTTGTCTCTAAAGCAGCAGGAGAAATGCTTTTGAAACATGTTGGAGACCCAAATATGGAATTTTGGCTTGTACCTTCATATGAGAACACAGCATGGTCAGTAATGGCGATTGCTTTCATCTCCCTTCTCGCTATATGTGCTGTGCTTGCAACTTGTTTCTTTGTGCGAAGGCATCGATTAAGACATTCTGGACA
TCGTTCACGTGTTCGTGAATTTCATGGTATGAGTGGTCGATTAGTGAAAGCAATGCCTAGTATGATATTCAGTTCAGTGGTGGATGACAACTGCACATCTGAGACCTGTGCAATATGTCTTGAAGACTATAAAGCTGGGGAGAAATTGCGTATCCTCCCATGCCACCACAAATTCCATGTGCTCTGCATAGACTCCTGGC
TCACAATGTGGCGGACATTTTGTCCAGTATGCAAGCGTGATGCAAGGATAAACACAGGTGAACTTCCAGCTTCAGAAAACACCCCTCTCCTATCTTCATCCTTGTCATTATCTGCTCCACTTTTGTCAGTTAGTGCATCATCTGAGTCATCTCTAATCGGGTCTCCAGCTATGCTTATACCTTCAAGCTCTCTACGATCT
CCTGCTACATCATCTTATATGGTTTCATATTCTGGTGCTTCTCGTAATGGTTCATCATACTTGCCACAATCAATTGGTTCCCATTGTATATCCCCTGTATCCAGCAGAAATTCTGTTAACATTGGAAATACATCCTATGTTTCTCACCACCTGTCTTTTCAGTCCTTAAATGTTCAGCCATCATTATTCTCACGTCCTAA
CTCCTTAGACATGTATGGTACCTCTCCACAAATGACTCCCCAGTCGTTTAGTTCCAGATATGCTTCATTCATCCCAGGCTCTTGCACTGCATCACCACACATTGCTAATTCACGCAGTCGACCTCCACGTGTACCACGCATGCCTTCCTATAGTGGCGTGCCATCTTATTGCGGGTCATTGACAAGCATCTCCCCATTTA
CATCTACAAGATCCTTACCAGTTTATCAAGACGAGACAAGATAGTGTGGTAGCGTTATCAGAAATGGCTCTGAATATTATAATGTGAGGACCTCCGTATAAGAGTTTCCAGACAAATCCTGATTTCTGAGTTATGTTAAGACATCAATCTGTAAATACAGGTTTGCATAGTAGGAATCTGTTTGATGTGGCACTTCAAAA
TCTTGAACCTGTATGTTCATTAAAGCATGAGCGTGTGCATTCCCTTTCTGAGGGTTGGGTCAAATGCCTTGTAGGCTTGTATTATTAGTTGTATATCAGAAATTTAGAACTATGTGGACTTTCTTGGGGTCTATCCAAATCCTGATTTCTGAGTTATG

>TRINITY_DN105078_c2_g5_i2 from sample A4 / Example unspliced isoform:

TGCCTGTCGATGTTGGACCCACTTATCGGGAAACTTCGCGTGTGCGGTGGGCCCAAGACGCAACGACGAAGAACCGGGCGAGCCGGTTTGGGAGCGTTCGGCGGAGATGCTGCGGCGAATCCGAGATTGGGCGGGGAGCGTCGATCTCGATCTGATTATGATTATGATTATGATTCTGAGGAGGAAAGATATGAATAATA
AGTAGAAAAGCGTATACTTGGTGGGGTAAATCATAGGGGTCTGGAAATGTTTTCATATTAGTGGTAGGCAATGGAGGAGGCCGGGGACGCTATGGAAGCGGATGTGTTGATCAAGGATAGACAGAAACAGAAAGAGACACAGATAACATTTTTATTCAAATCCACAGATTCTTCTTTTCTGCCGATCCGCCTCGGTGTCG
GTCTTCTTCCATTCCTGGGAAGGTAACAAAGAAATTAAAAAGTCCCTAGTTTTCATGTTTATGTGAGCGTTTCTAGGGTTCTCGGGTTTGTTCGAGCTCTGATCCGAGGGGATCAAGCTACTAAGACTTCAAAATTATATCTTTCCTTTTCTTAAGAAGCCTCGTAAACGGGGACAGTGCCACATGATCTTGAAAATATT
TGGTGTTTTACGTTGGATTTCGATCGATTGAAAGgctataatagaataggaggcatccttgtaggagggagtattctgtgactatctaaatgcttttgtggtaatgaaacatcgagaggtgattttcagtgtggtgtgcaatgaagcagGGTCATTTATAGTGGAAGTTGGGGTTAAATGGAGCAGAGAATCAGAACTCC
AAATGTTTTTCCGACAGTGAAACGTGTAAATTGGTGACCTTTAGTCTGTCATTCAGTGAAGAAGGGATATACAGTGTAAGTTGGGTCGTGTGTCTAAAATGGAGCAGAGGACATTAAAGAGGCACACGGGAGGATTAACAACAATAGGATTGTTGTATCTTTTTTCTCTACTTTCAGGGGGGTCGTCTGCAAATGTGGTC
CTGATTGGCAGCAACATATCTCAATCATTTGATGGTATTGAAGCAAACTTTGCTCCGGCAATTAGAGGATCAGGAGCTTGCAGTGTTTTACAACTTGCTGAACCTTTTGATGCCTGTACACCACTCACTAACAAAGCAATCTCACGTGAAGGTGTATATGCCCCATTTGCTCTAATAATCCGGGGTACATGCACCTTTGA
GAAGAAGGTTAGAAATGCACAAGCTGCAGGATTTAGTGCAGCCATTGTCTACAACAATGAAGATAGTACTGATCTTGTTTCAATGGCTGGAAATTCAGATGGTGTCACAATTCATGCAGTGTTTGTCTCTAAAGCAGCAGGAGAAATGCTTTTGAAACATGTTGGAGACCCAAATATGGAATTTTGGCTTGTACCTTCAT
ATGAGAACACAGCATGGTCAGTAATGGCGATTGCTTTCATCTCCCTTCTCGCTATATGTGCTGTGCTTGCAACTTGTTTCTTTGTGCGAAGGCATCGATTAAGACATTCTGGACATCGTTCACGTGTTCGTGAATTTCATGGTATGAGTGGTCGATTAGTGAAAGCAATGCCTAGTATGATATTCAGTTCAGTGGTGGAT
GACAACTGCACATCTGAGACCTGTGCAATATGTCTTGAAGACTATAAAGCTGGGGAGAAATTGCGTATCCTCCCATGCCACCACAAATTCCATGTGCTCTGCATAGACTCCTGGCTCACAATGTGGCGGACATTTTGTCCAGTATGCAAGCGTGATGCAAGGATAAACACAGGTGAACTTCCAGCTTCAGAAAACACCCC
TCTCCTATCTTCATCCTTGTCATTATCTGCTCCACTTTTGTCAGTTAGTGCATCATCTGAGTCATCTCTAATCGGGTCTCCAGCTATGCTTATACCTTCAAGCTCTCTACGATCTCCTGCTACATCATCTTATATGGTTTCATATTCTGGTGCTTCTCGTAATGGTTCATCATACTTGCCACAATCAATTGGTTCCCATT
GTATATCCCCTGTATCCAGCAGAAATTCTGTTAACATTGGAAATACATCCTATGTTTCTCACCACCTGTCTTTTCAGTCCTTAAATGTTCAGCCATCATTATTCTCACGTCCTAACTCCTTAGACATGTATGGTACCTCTCCACAAATGACTCCCCAGTCGTTTAGTTCCAGATATGCTTCATTCATCCCAGGCTCTTGC
ACTGCATCACCACACATTGCTAATTCACGCAGTCGACCTCCACGTGTACCACGCATGCCTTCCTATAGTGGCGTGCCATCTTATTGCGGGTCATTGACAAGCATCTCCCCATTTACATCTACAAGATCCTTACCAGTTTATCAAGACGAGACAAGATAGTGTGGTAGCGTTATCAGAAATGGCTCTGAATATTATAATGT
GAGGACCTCCGTATAAGAGTTTCCAGACAAATCCTGATTTCTGAGTTATGTTAAGACATCAATCTGTAAATACAGGTTTGCATAGTAGGAATCTGTTTGATGTGGCACTTCAAAATCTTGAACCTGTATGTTCATTAAAGCATGAGCGTGTGCATTCCCTTTCTGAGGGTTGGGTCAAATGCCTTGTAGGCTTGTATTAT
TAGTTGTATATCAGAAATTTAGAACTATGTGGACTTTCTTGGGGTCTATCCAAATCCTGATTTCTGAGTTATG

Intron 3 GTATGAGTGG ... TGTCTTGAAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	70.59	10	23	25
A2	71.43	5	10	15
A3	64.91	10	25	12
A4	76.47	4	15	11
A5	80	2	12	4
A6	86.67	7	41	50
A7	69.33	23	46	58
A8	65.59	32	61	61
A9	75.51	18	58	53
A10	72.92	13	26	44

>TRINITY_DN123072_c0_g1_i6 from sample A2 / Example spliced isoform

CGGGCGGCCGCCGGCGCCGGGCATGCAAATTGCCCTCAACTATAGCTTAAAGAGATTTTACTACCACATTCCATTGGGCCAGCTGCCTGTCGATGTTGGACCCACTTATCGGGAAACTTCGCGTGTGCGGTGGGCCCAAGACGCAACGACGAAGAACCGGGCGAGCCGGTTTGGGAGCGTTCGGCGGAGATGCTGCGGCG
AATCCGAGATTGGGCGGGGAGCGTCGATCTCGATCTGATTATGATTATGATTATGATTCTGAGGAGGAAAGATATGAATAATAAGTAGAAAAGCGTATACTTGGTGGGGTAAATCATAGGGGTCTGGAAATGTTTTCATATTAGTGGTAGGCAATGGAGGAGGCCGGGGACGCTATGGAAGCGGATGTGTTGATCAAGGA
TAGACAGAAACAGAAAGAGACACAGATAACATTTTTATTCAAATCCACAGATTCTTCTTTTCTGCCGATCCGCCTCGGTGTCGGTCTTCTTCCATTCCTGGGAAGGTAACAAAGAAATTAAAAAGTCCCTAGTTTTCATGTTTATGTGAGCGTTTCTAGGGTTCTCGGGTTTGTTCGAGCTCTGATCCGAGGGGATCAAG
CTACTAAGACTTCAAAATTATATCTTTCCTTTTCTTAAGAAGCCTCGTAAACGGGGACAGTGCCACATGATCTTGAAAATATTTGGTGTTTTACGTTGGATTTCGATCGATTGAAAGGCTATAATAGAATAGGAGGCATCCTTGTAGGAGGGAGTATTCTGTGACTATCTAAATGCTTTTGTGGTAATGAAACATCGAGA
GGTGATTTTCAGTGTGGTGTGCAATGAAGCAGGGTCATTTATAGTGGAAGTTGGGGTTAAATGGAGCAGAGAATCAGAACTCCAAATGTTTTTCCGACAGTGAAACGTGTAAATTGGTGACCTTTAGTCTGTCATTCAGTGAAGAAGGGATATACAGTGTAAGTTGGGTCGTGTGTCTAAAATGGAGCAGAGGACATTAA
AGAGGCACACGGGAGGATTAACAACAATAGGATTGTTGTATCTTTTTTCTCTACTTTCAGGGGGGTCGTCTGCAAATGTGGTCCTGATTGGCAGCAACATATCTCAATCATTTGATGGTATTGAAGCAAACTTTGCTCCGGCAATTAGAGGATCAGGAGCTTGCAGTGTTTTACAACTTGCTGAACCTTTTGATGCCTGT
ACACCACTCACTAACAAAGCAATCTCACGTGAAGGTGTATATGCCCCATTTGCTCTAATAATCCGGGGTACATGCACCTTTGAGAAGAAGGTTAGAAATGCACAAGCTGCAGGATTTAGTGCAGCCATTGTCTACAACAATGAAGATAGTACTGATCTTGTTTCAATGGCTGGAAATTCAGATGGTGTCACAATTCATGC
AGTGTTTGTCTCTAAAGCAGCAGGAGAAATGCTTTTGAAACATGTTGGAGACCCAAATATGGAATTTTGGCTTGTACCTTCATATGAGAACACAGCATGGTCAGTAATGGCGATTGCTTTCATCTCCCTTCTCGCTATATGTGCTGTGCTTGCAACTTGTTTCTTTGTGCGAAGGCATCGATTAAGACATTCTGGACATC
GTTCACGTGTTCGTGAATTTCATGACTATAAAGCTGGGGAGAAATTGCGTATCCTCCCATGCCACCACAAATTCCATGTGCTCTGCATAGACTCCTGGCTCACAATGTGGCGGACATTTTGTCCAGTATGCAAGCGTGATGCAAGGATAAACACAGGTGAACTTCCAGCTTCAGAAAACACCCCTCTCCTATCTTCATCC
TTGTCATTATCTGCTCCACTTTTGTCAGTTAGTGCATCATCTGAGTCATCTCTAATCGGGTCTCCAGCTATGCTTATACCTTCAAGCTCTCTACGATCTCCTGCTACATCATCTTATATGGTTTCATATTCTGGTGCTTCTCGTAATGGTTCATCATACTTGCCACAATCAATTGGTTCCCATTGTATATCCCCTGTATC
CAGCAGAAATTCTGTTAACATTGGAAATACATCCTATGTTTCTCACCACCTGTCTTTTCAGTCCTTAAATGTTCAGCCATCATTATTCTCACGTCCTAACTCCTTAGACATGTATGGTACCTCTCCACAAATGACTCCCCAGTCGTTTAGTTCCAGATATGCTTCATTCATCCCAGGCTCTTGCACTGCATCACCACACA
TTGCTAATTCACGCAGTCGACCTCCACGTGTACCACGCATGCCTTCCTATAGTGGCGTGCCATCTTATTGCGGGTCATTGACAAGCATCTCCCCATTTACATCTACAAGATCCTTACCAGTTTATCAAGACGAGACAAGATAGTGTGGTAGCGTTATCAGAAATGGCTCTGAATATTATAATGTGAGGACCTCCGTATAA
GAGTTTCCAGACAAATCCTGATTTCTGAGTTATGTTAAGACATCAATCTGTAAATACAGGTTTGCATAGTAGGAATCTGTTTGATGTGGCACTTCAAAATCTTGAACCTGTATGTTCATTAAAGCATGAGCGTGTGCATTCCCTTTCTGAGGGTTGGGTCAAATGCCTTGTAGGCTTGTATTATTAGTTGTATATCAGAA
ATTTAGAACTATGTGGACTTTCTTGGGGTCTATCCAAATCCTGATTTCTGAGTTATG

>TRINITY_DN123072_c0_g1_i1 from sample A2 / Example unspliced isoform:

CGGGCGGCCGCCGGCGCCGGGCATGCAAATTGCCCTCAACTATAGCTTAAAGAGATTTTACTACCACATTCCATTGGGCCAGCTGCCTGTCGATGTTGGACCCACTTATCGGGAAACTTCGCGTGTGCGGTGGGCCCAAGACGCAACGACGAAGAACCGGGCGAGCCGGTTTGGGAGCGTTCGGCGGAGATGCTGCGGCG
AATCCGAGATTGGGCGGGGAGCGTCGATCTCGATCTGATTATGATTATGATTATGATTCTGAGGAGGAAAGATATGAATAATAAGTAGAAAAGCGTATACTTGGTGGGGTAAATCATAGGGGTCTGGAAATGTTTTCATATTAGTGGTAGGCAATGGAGGAGGCCGGGGACGCTATGGAAGCGGATGTGTTGATCAAGGA
TAGACAGAAACAGAAAGAGACACAGATAACATTTTTATTCAAATCCACAGATTCTTCTTTTCTGCCGATCCGCCTCGGTGTCGGTCTTCTTCCATTCCTGGGAAGGCTATAATAGAATAGGAGGCATCCTTGTAGGAGGGAGTATTCTGTGACTATCTAAATGCTTTTGTGGTAATGAAACATCGAGAGGTGATTTTCAG
TGTGGTGTGCAATGAAGCAGGGTCATTTATAGTGGAAGTTGGGGTTAAATGGAGCAGAGAATCAGAACTCCAAATGTTTTTCCGACAGTGAAACGTGTAAATTGGTGACCTTTAGTCTGTCATTCAGTGAAGAAGGGATATACAGTGTAAGTTGGGTCGTGTGTCTAAAATGGAGCAGAGGACATTAAAGAGGCACACGG
GAGGATTAACAACAATAGGATTGTTGTATCTTTTTTCTCTACTTTCAGGGGGGTCGTCTGCAAATGTGGTCCTGATTGGCAGCAACATATCTCAATCATTTGATGGTATTGAAGCAAACTTTGCTCCGGCAATTAGAGGATCAGGAGCTTGCAGTGTTTTACAACTTGCTGAACCTTTTGATGCCTGTACACCACTCACT
AACAAAGCAATCTCACGTGAAGGTGTATATGCCCCATTTGCTCTAATAATCCGGGGTACATGCACCTTTGAGAAGAAGGTTAGAAATGCACAAGCTGCAGGATTTAGTGCAGCCATTGTCTACAACAATGAAGATAGTACTGATCTTGTTTCAATGGCTGGAAATTCAGATGGTGTCACAATTCATGCAGTGTTTGTCTC
TAAAGCAGCAGGAGAAATGCTTTTGAAACATGTTGGAGACCCAAATATGGAATTTTGGCTTGTACCTTCATATGAGAACACAGCATGGTCAGTAATGGCGATTGCTTTCATCTCCCTTCTCGCTATATGTGCTGTGCTTGCAACTTGTTTCTTTGTGCGAAGGCATCGATTAAGACATTCTGGACATCGTTCACGTGTTC
GTGAATTTCATGgtatgagtggtcgattagtgaaagcaatgcctagtatgatattcagttcagtggtggatgacaactgcacatctgagacctgtgcaatatgtcttgaagACTATAAAGCTGGGGAGAAATTGCGTATCCTCCCATGCCACCACAAATTCCATGTGCTCTGCATAGACTCCTGGCTCACAATGTGGCGG
ACATTTTGTCCAGTATGCAAGCGTGATGCAAGGATAAACACAGGTGAACTTCCAGCTTCAGAAAACACCCCTCTCCTATCTTCATCCTTGTCATTATCTGCTCCACTTTTGTCAGTTAGTGCATCATCTGAGTCATCTCTAATCGGGTCTCCAGCTATGCTTATACCTTCAAGCTCTCTACGATCTCCTGCTACATCATC
TTATATGGTTTCATATTCTGGTGCTTCTCGTAATGGTTCATCATACTTGCCACAATCAATTGGTTCCCATTGTATATCCCCTGTATCCAGCAGAAATTCTGTTAACATTGGAAATACATCCTATGTTTCTCACCACCTGTCTTTTCAGTCCTTAAATGTTCAGCCATCATTATTCTCACGTCCTAACTCCTTAGACATGT
ATGGTACCTCTCCACAAATGACTCCCCAGTCGTTTAGTTCCAGATATGCTTCATTCATCCCAGGCTCTTGCACTGCATCACCACACATTGCTAATTCACGCAGTCGACCTCCACGTGTACCACGCATGCCTTCCTATAGTGGCGTGCCATCTTATTGCGGGTCATTGACAAGCATCTCCCCATTTACATCTACAAGATCC
TTACCAGTTTATCAAGACGAGACAAGATAGTGTGGTAGCGTTATCAGAAATGGCTCTGAATATTATAATGTGAGGACCTCCGTATAAGAGTTTCCAGACAAATCCTGATTTCTGAGTTATGTTAAGACATCAATCTGTAAATACAGGTTTGCATAGTAGGAATCTGTTTGATGTGGCACTTCAAAATCTTGAACCTGTAT
GTTCATTAAAGCATGAGCGTGTGCATTCCCTTTCTGAGGGTTGGGTCAAATGCCTTGTAGGCTTGTATTATTAGTTGTATATCAGAAATTTAGAACTATGTGGACTTTCTTGGGGTCTATCCAAATCCTGATTTCTGAGTTATG