sp|Q8LA53|MBD2_ARATH ----> Methyl-CpG-binding domain-containing protein 2

Intron 1 GTACTATTAA ... GATTATACAG

Sample	Retention score (%)	Exon junction reads	5'ss reads	3'ss reads
A1	42.86	8	9	3
A2	45.95	10	15	2
A3	83.78	3	16	15
A4	58.82	7	8	12
A5	56.52	5	11	2
A6	59.71	28	44	39
A7	59.32	12	21	14
A8	57.65	18	19	30
A9	61.74	22	43	28
A10	64.21	17	33	28

>TRINITY_DN41984_c0_g1_i3 from sample A9 / Example spliced isoform

GTCCATATTTAGAATATTTAAAATATATATTTACGTCAAAAGCGTTCTTTCTGCAAAGATGGTCCATGCTTTGGTAGCATGATTCCTCGTCTGTTGAGCCATTAAATCATCGCCATGTGTTTCTCCTGGCTCCGTCGGTTTAGATTTATCCAGGTTTTAGGGTTTCAATTTATATGTATCATGTTTCTGGTCACTCCAGT
GCGGCATTCAAACTTTCCTGACACCGTAGACGAAGGCAGTGCGCAATATCGTAGCTCTCTTTACATACACACCCATCGTCCTCCTACATTGTTCAGACCAGTTTCCAACCCTTCATTATCTTTTTCATGTTTCATTTCGATCTGCTTACTCCTGAAAAGTTTCAGTATGGCGCTCGTTCTCCATCCTTCCAAGAAAAGTG
CTGAGATTACATTCGGCATCTATAAGCCGACCAACGGCTACGATATCGATGACGCACTGAGGCACATTAGGGCGGCCATCACCTCCGTCGAGCAGGCCGGTAGCGTCAAAGCAGCCATTCTTTCCATCCTCAATGGCTCATGGGTAGCAGTTTTCTGTGATTGGAGAGGCGCTGCACCAAAATCCTACACGATTTGAGCG
AGGAGGCAACGGCCGTTCTCAGAAAAGTGGACTGCGAGAGCTTCCATTTGATCTTATCGGAGCCTAGGGAGGTGGTTTCGTCCGCCCGGCTATCAATCGGGGGAATCGTAAGCGTGCGGAGAATATACACGAACATCAAGATGCAGGAGGTGCTCGCTTTCAGCTGCATGGCCGTGTCGAGGGCATACTCTGCATAGATA
AAGGGGCTTCTTTCCTCCAACTTTTATAAGTCCGATGATGGGATGTTGATTATCGGATTGGACACATGGGACAACGCCGACTCTGCCTCTACTCTCTTGGATTCCTGCGGAGGTAGCCCCGTCCATGTACTGAAGTCTATGATCCTCATGGAAATAATATTGAAGAACAAGAGAATTGCTCTGTTTCAAATCCCATTGTT
GTACAAGAAATTCCATTTAATGCTTTATCTATGCCGAGAGACACTTCAAGATGGGTTTTACCTGTTGTAGGGGCATTCACCGTTCGGTGTGCTTAGGGGCATTCACCGTTCAGTGTGCTCGGTGCTTCAAATGGAGGTTAATTCCAACTAAGAGCAATATGAAGCTATTCGACAATGCATTCTGGAGGATCCTTGGGTCT
GTGAAAATGCTTATCGTTCGCGTCCAGATGCATCATGCGATG

>TRINITY_DN41984_c0_g1_i2 from sample A9 / Example unspliced isoform:

GTCCATATTTAGAATATTTAAAATATATATTTACGTCAAAAGCGTTCTTTCTGCAAAGATGGTCCATGCTTTGGTAGCATGATTCCTCGTCTGTTGATCCATTAGATCATGGCCATGTGTTTCTCCTGGCTCCGTCGGTTTAGATTTATCCAGGTTTTAGGGTTTCAATTTATATGTATCATGTTTCTGGTCACTCCAGT
GCGGCATTCAAACTTTCAAAACACCGTAGACGAAGGCAGTGGGCAATATCGTAGCACCGTAGACGAAGGCAGTGGGCAATATCGTAGCTCTCTTTACATACACACCCATCGTCCTCCTACATTGTTCAGACCAGTTTCCAACCCTTCATTATCTTTTTCATGTTTCATTTCGATCTGCTTACTCCTGAAAAGTTTCAGTA
TGGCGCTCGTTCTCCATCCTTCCAAGAAAAGTGCTGAGATTACATTCGGCATCTATAAGCCGACCAACGGCTACGATATCGATGACGCACTGAGGCACATTAGGGCGGCCATCACCTCCGTCGAGCAGGCCGGTAGCGTCAAAGCAGCCATTCTTTCCATCCTCAATGGCTCATGGgtactattaattaacccttcccct
ccagagtattctcagttctatttacacaagcagcgtttgtgattatacagGTAGCAGTTTTCTGTGATTGGAGAGGCGCTGCACCAAAATCCTACACGATTTGAGCGAGGAGGCAACGGCCGTTCTCAGAAAAGTGGACTGCGAGAGCTTCCATTTGATCTTATCGGAGCCTAGGGAGGTGGTTTCGTCCGCCCGGCTAT
CAATCGGGGGAATCGTAAGCGTGCGGAGAATATACACGAACATCAAGATGCAGGAGGTGCTCGCTTTCAGCTGCATGGCCGTGTCGAGGGCATACTCTGCATAGATAAAGGGGCTTCTTTCCTCCAACTTTTATAAGTCCGATGATGGGATGTTGATTATCGGATTGGACACATGGGACAACGCCGACTCTGCCTCTACT
CTCTTGGATTCCTGCGGAGGTAGCCCCGTCCATGTACTGAAGTCTATGATCCTCATGGAAATAATATTGAAGAACAAGAGAATTGCTCTGTTTCAAATCCCATTGTTGTACAAGAAATTCCATTTAATGCTTTATCTATGCCGAGAGACACTTCAAGATGGGTTTTACCTGTTGTAGGGGCATTCACCGTTCGGTGTGCT
TAGGGGCATTCACCGTTCAGTGTGCTCGGTGCTTCAAATGGAGGTTAATTCCAACTAAGAGCAATATGAAGCTATTCGACAATGCATTCTGGAGGATCCTTGGGTCTGTGAAAATGCTTATCGTTCGCGTCCAGATGCATCATGCGATG