sp|Q5VRB2|BASS2_ORYSJ ----> Probable sodium/metabolite cotransporter BASS2, chloroplastic
Intron 1 GTTAAGTAGA ... ATAAATGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 9 | 66.7 | 2 | 6 |
| A2 | 16.05 | 48.3 | 1 | 9 |
| A3 | 6.42 | 60 | 2 | 4 |
| A4 | 20.54 | 33 | 1 | 7 |
| A5 | 2.92 | 35.3 | 1 | 1 |
| A6 | 0 | 177 | 0 | 0 |
| A7 | 1.17 | 262.7 | 0 | 3 |
| A8 | 0 | 173 | 1 | 0 |
| A9 | 0 | 206 | 0 | 0 |
| A10 | 0 | 224.7 | 0 | 0 |
>TRINITY_DN108859_c0_g1_i6 from sample A2 / Example spliced isoformGATGTTATAACCAGTTTTTTGTTTCCTGTTCTGCTATTGAATGTACATGCTAAAAATATTCATTGTTGATAAGAAGACTTAATGTTATAAATGGACTTTTCTGTTTGCATGGCAAGTGCACTTTTATCATGGGTGAGAGTTTTGCAGGACGAAGAGAATCTGGAGGATGATGGGATCAAAATTGAGCCATTCAATTTGAA
ACAAGAAAGAGAGGAGGGTTATTTCGATTCAGAAGGGAACTATGTAGAGTATGGAAATGGCAATGAAATTAAGGTCTCTTCTATGATATTCAATATGATGTTTTCTTATGTTCATCATTGACTTTGAGGGAATCTCAAATCATGTATTTATGATAGTCATGCCTCATCTGTAGAAGGATATTTTTTTTCTATGCTGTATT
TCATGACTAGTTACTTTTCTATTGATGAAATGTGCAATATGTTACATGTTTGAACTAGGATGCCTGGCTTGATAGTGTGGAGGTGGACACTCGTTTTGCAGAGGAGCACTTGAAACAATCTATTGATGCAAGTGAAGATGATGATGATCTTTCACCTGAAGAAATTAGTATAATCAAGAGGCGTATAGCCAATGTACTTC
AACCTGGAGAAACGGTTTTGCAAGCTCTGCGGAGGATGAAGGGAGCATCGAATGGTAACAACAAGCGTGAGAAAATGCCAGCAGAAACAAAAGCCATCTTTGATCAGCTCACAGATGATGCCATGAAACTGATGGATGGTGGTGATTTCAATGTATATCAGGAGAAAAAGGCTACATTTGAACGAGAAGCTGAGGGATAT
GAAGCAGTGGCTCGTGCAAAGGGTGGGACATTGGTCAGCAATACAGATTTGGACACTGAAAGTAGGAATCCTAACACTGGGGAAGCAGAAGACATTTTTGCTGATGATGAAACAGAAGTTAGAGTAAATGATGTTTTGTCCTCTGGAGGGGCCTCAGTTTCTACAGACATGAATTTGCAGAGCTTGCAAGCTTCTTCAAG
TGGGGGATTTAGTGACACAGTAGATATCTTTGGGGAAGATGATGAAGCCGTTGGTCAGGATACTGTTTCTCATCAACCTATTCTCCAAGGAGAGGCACCACAATCAGCAAATAGTTCTGGTAGTAATACATTTGGAGGTGAAGCAACAGATTCCGATTATGTTTACGATGAATCATCAGGGTATTACTACAGCAGCAAAC
TAGGGTACTATTATGACACAACTACTGGACTTTTCTGCAATGCAATGTCAGGCAGATGGTACAGATTTAATGAACAGTCCAACACGTATGAAGAAATGCAGGATGGTTCAGCTGAGCTTGCAAATCCTTCAGCCCAATAACTGGGCTTTCAAACTTGAAACAGTTAAAATATTCTGCTCAACCCTCTCAGTCAATTTCTG
AGTTTGGGCCTGATGGCTTTCTGCCATGAATTTTGTGTACCATGGGAATATATATTATAAACTGCTGCTCTTCAGTTTTCTTCAAAGAGTGCAAATATTTTTCAACAGTTACGATATGGGAATAAAGGGGATATTGTTGCAAACATTTTTTGGTGGTGTAAACCTTTATTAGTTTCGGTTTTCTCCATTGCTGATACTGG
CAGCAGTAGTGCAGCTTTTCACCATTTTTTCTTGTAAAGATATGTATGTCAGTTGGGAACCCACAATGCTAGAGTGTAATCTTTTTAATGCTCTGTATAAGTATCAAGACATGGTATATACATTTTAGAAAGCAAT
>TRINITY_DN108859_c0_g1_i1 from sample A2 / Example unspliced isoform:ACTGATGGATGGTGGTGATTTCAgttaagtagataattttctctaatcgttggaatttctcagtttggttttatacagtagtttattgctctgtttggttttatacagtaggggtttgtgtactagtattttttggttttatgcatgtgtttcttgtgctcaatcttatatttctttggtaattagacattgactgttct
tacatcatattccagttgcatgtttgctttagagggcatgtgatcacttcctgtacatgtctgcattttctgcaatattttgcttcttcctgtaggatatcttagatgtgataaaggaggacacttaaaagttagttgttgccggactactattctccacattcctttgctcatatgcttaagctttggtgtctcataaa
tgcagATGTATATCAGGAGAAAAAGGCTACATTTGAACGAGAAGCTGGTAAGCAATGATGAAACTCTTGTAAAATGGAAAACTTGTTCTTATATTTGGTTCTTTTCTATATTCACTCCCTACTGTTGCACGGGTACAAACTAGGAGGATGGCGGAAGGGATACAAGAAGCTTTTTCAATCAATTTGCTTAGGGCTGGGCT
AGTTTTTATCTTACTAGTAGTACTACACAGTAAGTTTGTATTACATATTGGTTATTCCCCAAAAAGAAAAGAAAAAAACTTGTCCTATTGGTTCAGTTACATGGTCTGACTCTCAGACCTGGGCAGCTGGAGGATTTACAAGGGATCAGATTCCCCTAGTTTTTATCTTACTAGTAGT
Intron 2 GTCTCTTCTA ... TTTGAACTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 30.77 | 63 | 38 | 18 |
| A2 | 30 | 35 | 10 | 20 |
| A3 | 23.91 | 70 | 19 | 25 |
| A4 | 26.32 | 49 | 25 | 10 |
| A5 | 31.43 | 12 | 8 | 3 |
| A6 | 24.42 | 82 | 25 | 28 |
| A7 | 25.75 | 186 | 61 | 68 |
| A8 | 22.15 | 116 | 21 | 45 |
| A9 | 21.94 | 185 | 30 | 74 |
| A10 | 24.17 | 182 | 52 | 64 |
>TRINITY_DN108859_c0_g1_i5 from sample A2 / Example spliced isoformACAGAGACAACGATGAGACAAGGAAGTTATAAAATGTACAGAGACAACGATGAGACAAGGAAGTTATAAAATGTACACAGAGATGTAAACAATGATGAAGGATTGACAGATGAAACGCATCTCGTGAAAATTCTTTGAAGTAAAAATTTACTCCGGCCACGGCAACAACAGGAACGAAACATACGCACACAGCATGGAGC
CTTCAGTAAACCGTCGCCAGAATCTTGAAGCTTGGGAGGGAATCGACCCGGACACAGACGAAACCCCAAGGCAGAAGAAGCCGAGGTTTCCCAAGGGCAAGAAGCAGAAAACAGGAAATGAGAACGACGGTGCAGAGAATGGAAGGCCGGAAGGTCCTGTTAAGGCTACGGATCCTCGCTTGGCCGCTACGAGACGTGCC
GCCCGACGCAGGGACAGGCCCGAGGAGTTCCTGAATGCACGGGACACCTCTGTGCTCGACGACATAGGCGAAGCTGAGGAGGAATACGAGGAGGACGAAGAGAATCTGGAGGATGATGGGATCAAAATTGAGCCATTCAATTTGAAACAAGAAAGAGAGGAGGGTTATTTCGATTCAGAAGGGAACTATGTAGAGTATGG
AAATGGCAATGAAATTAAGGATGCCTGGCTTGATAGTGTGGAGGTGGACACTCGTTTTGCAGAGGAGCACTTGAAACAATCTATTGATGCAAGTGAAGATGATGATGATCTTTCACCTGAAGAAATTAGTATAATCAAGAGGCGTATAGCCAATGTACTTCAACCTGGAGAAACGGTTTTGCAAGCTCTGCGGAGGATGA
AGGGAGCATCGAATGGTAACAACAAGCGTGAGAAAATGCCAGCAGAAACAAAAGCCATCTTTGATCAGCTCACAGATGATGCCATGAAACTGATGGATGGTGGTGATTTCAATGTATATCAGGAGAAAAAGGCTACATTTGAACGAGAAGCTGAGGGATATGAAGCAGTGGCTCGTGCAAAGGGTGGGACATTGGTCAGC
AATACAGATTTGGACACTGAAAGTAGGAATCCTAACACTGGGGAAGCAGAAGACATTTTTGCTGATGATGAAACAGAAGTTAGAGTAAATGATGTTTTGTCCTCTGGAGGGGCCTCAGTTTCTACAGACATGAATTTGCAGAGCTTGCAAGCTTCTTCAAGTGGGGGATTTAGTGACACAGTAGATATCTTTGGGGAAGA
TGATGAAGCCGTTGGTCAGGATACTGTTTCTCATCAACCTATTCTCCAAGGAGAGGCACCACAATCAGCAAATAGTTCTGGTAGTAATACATTTGGAGGTGAAGCAACAGATTCCGATTATGTTTACGATGAATCATCAGGGTATTACTACAGCAGCAAACTAGGGTACTATTATGACACAACTACTGGACTTTTCTGCA
ATGCAATGTCAGGCAGATGGTACAGATTTAATGAACAGTCCAACACGTATGAAGAAATGCAGGATGGTTCAGCTGAGCTTGCAAATCCTTCAGCCCAATAACTGGGCTTTCAAACTTGAAACAGTTAAAATATTCTGCTCAACCCTCTCAGTCAATTTCTGAGTTTGGGCCTGATGGCTTTCTGCCATGAATTTTGTGTA
CCATGGGAATATATATTATAAACTGCTGCTCTTCAGTTTTCTTCAAAGAGTGCAAATATTTTTCAACAGTTACGATATGGGAATAAAGGGGATATTGTTGCAAACATTTTTTGGTGGTGTAAACCTTTATTAGTTTCGGTTTTCTCCATTGCTGATACTGGCAGCAGTAGTGCAGCTTTTCACCATTTTTTCTTGTAAAG
ATATGTATGTCAGTTGGGAACCCACAATGCTAGAGTGTAATCTTTTTAATGCTCTGTATAAGTATCAAGACATGGTATATACATTTTAGAAAGCAAT
>TRINITY_DN108859_c0_g1_i6 from sample A2 / Example unspliced isoform:GATGTTATAACCAGTTTTTTGTTTCCTGTTCTGCTATTGAATGTACATGCTAAAAATATTCATTGTTGATAAGAAGACTTAATGTTATAAATGGACTTTTCTGTTTGCATGGCAAGTGCACTTTTATCATGGGTGAGAGTTTTGCAGGACGAAGAGAATCTGGAGGATGATGGGATCAAAATTGAGCCATTCAATTTGAA
ACAAGAAAGAGAGGAGGGTTATTTCGATTCAGAAGGGAACTATGTAGAGTATGGAAATGGCAATGAAATTAAGgtctcttctatgatattcaatatgatgttttcttatgttcatcattgactttgagggaatctcaaatcatgtatttatgatagtcatgcctcatctgtagaaggatattttttttctatgctgtatt
tcatgactagttacttttctattgatgaaatgtgcaatatgttacatgtttgaactagGATGCCTGGCTTGATAGTGTGGAGGTGGACACTCGTTTTGCAGAGGAGCACTTGAAACAATCTATTGATGCAAGTGAAGATGATGATGATCTTTCACCTGAAGAAATTAGTATAATCAAGAGGCGTATAGCCAATGTACTTC
AACCTGGAGAAACGGTTTTGCAAGCTCTGCGGAGGATGAAGGGAGCATCGAATGGTAACAACAAGCGTGAGAAAATGCCAGCAGAAACAAAAGCCATCTTTGATCAGCTCACAGATGATGCCATGAAACTGATGGATGGTGGTGATTTCAATGTATATCAGGAGAAAAAGGCTACATTTGAACGAGAAGCTGAGGGATAT
GAAGCAGTGGCTCGTGCAAAGGGTGGGACATTGGTCAGCAATACAGATTTGGACACTGAAAGTAGGAATCCTAACACTGGGGAAGCAGAAGACATTTTTGCTGATGATGAAACAGAAGTTAGAGTAAATGATGTTTTGTCCTCTGGAGGGGCCTCAGTTTCTACAGACATGAATTTGCAGAGCTTGCAAGCTTCTTCAAG
TGGGGGATTTAGTGACACAGTAGATATCTTTGGGGAAGATGATGAAGCCGTTGGTCAGGATACTGTTTCTCATCAACCTATTCTCCAAGGAGAGGCACCACAATCAGCAAATAGTTCTGGTAGTAATACATTTGGAGGTGAAGCAACAGATTCCGATTATGTTTACGATGAATCATCAGGGTATTACTACAGCAGCAAAC
TAGGGTACTATTATGACACAACTACTGGACTTTTCTGCAATGCAATGTCAGGCAGATGGTACAGATTTAATGAACAGTCCAACACGTATGAAGAAATGCAGGATGGTTCAGCTGAGCTTGCAAATCCTTCAGCCCAATAACTGGGCTTTCAAACTTGAAACAGTTAAAATATTCTGCTCAACCCTCTCAGTCAATTTCTG
AGTTTGGGCCTGATGGCTTTCTGCCATGAATTTTGTGTACCATGGGAATATATATTATAAACTGCTGCTCTTCAGTTTTCTTCAAAGAGTGCAAATATTTTTCAACAGTTACGATATGGGAATAAAGGGGATATTGTTGCAAACATTTTTTGGTGGTGTAAACCTTTATTAGTTTCGGTTTTCTCCATTGCTGATACTGG
CAGCAGTAGTGCAGCTTTTCACCATTTTTTCTTGTAAAGATATGTATGTCAGTTGGGAACCCACAATGCTAGAGTGTAATCTTTTTAATGCTCTGTATAAGTATCAAGACATGGTATATACATTTTAGAAAGCAAT