sp|F4I2N7|RLK7_ARATH ----> Receptor-like protein kinase 7
Intron 1 GTAAGTTCTC ... CTTCATGGAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 100 | 0 | 8 | 4.5 |
| A2 | 85.16 | 1 | 5 | 6.5 |
| A3 | 89.74 | 1 | 11 | 6.5 |
| A4 | 87.87 | 1 | 14 | 0.5 |
| A5 | 100 | 0 | 4 | 8.5 |
| A6 | 100 | 0 | 6 | 2.5 |
| A7 | 90.48 | 1 | 13 | 6 |
| A8 | 72.38 | 2 | 4 | 6.5 |
| A9 | 100 | 0 | 6 | 7.5 |
| A10 | 87.09 | 1 | 10 | 3.5 |
>TRINITY_DN41153_c1_g1_i7 from sample A9 / Example spliced isoformCATGTCGATGAACAATTTCTTTGAGGATCGAGTCTTCTGGTCGCAGCTCTCTAGCTATGGTGTGGATGTTGTTTCGATTTCTTCTTTTGCTGAATCAGAGTTCAAAGGATTTGCATTCATTAGTGTTGCCAGGAAGGTAAAAATATGTCCGTGAAGGTTACACAAATCCTTCTTGATGCACAATCTGCTAATGGTGCTGT
TCGGAAGCATGCAAAAGAGAATATGAGGCAGTTCCAAGATCATAATTTGTTGTCCTTTCTCATATCCCTATTTGGGGATCTAGAAAATAATGAAAAGCATGTTGAAAGTCGTCAACTTGCAGGCTTGATTTTGAAGAACACATTAGATGCCAAGTAGCCACACCGAAAGGCTGAGTTAGTACAGAGATGGATCTCCCTAG
ATGGGACTGTGAAGATCCAAATCAAGGGGCTCTTACTACATACTCTTTCTTCACCTATTCTAGATGCTCGATCTACTTCACCACAGGTTATAGCAAAATTGTTGGTATTGAATTACCTCAAGGCCAATGGCCAGATCTCATCAGGACATTATCACTCAACATGGGTGGCCTACAAATAGAACTACCCGCACATCTCAAAC
AGGCAACTCTAGAAACTCTTGGATATCTTTGTGAGGAGGTTGCTGCAGATACTCTTGCTCATGATTGGGTGAATTCCATCCTTACAACTGTTGCAGGGAATGAATTCATCTGAGCTTAACAATGAGGTCAGGCTTGCTACTACTCAAGCATTGTATAATGCTTTGAATTTTGCTCAGATGAATTTTGATAATGATGTAGA
GAGAGATTATATTATGAGAGTAGTGTGTGAAGCAAACTTGTCTCCAAAAGTATGGATTCAACAAGCTGCTTTTGCATGCCTAGTGTCAATATCTTCTACATATTATGAGAAGCTTGTTCCTTACATGCAAGACATATTTCATATTACAAAAAAGGCTGTCAAAACAGATGAAGAGCCTGTTGCTTTTCAAGCGATCAAGT
TTTGGAGTTCCATATGTGATGAAGAAATTGATATATTAGAGGAATATGCAGGAGATTTAAGTGGTGATTCAGATGTTCCTTGCATTTATTTTATTAAGCAACACTTCCTCCTCTTGTGCCAATGTTGTTAGAGACATTGTTGAAATAGGAAGAGGATCAAGATCAGGATGAGGGGGCATGGAATCTGTCTATGGATGGAG
GAACTTGCTTGGGTCTTGTTGCTAGAACTGTGGGAGATGATGTTGTCCCCCCTTGTCGTGCCATTTGTAGAAGAAAACATATCAAATCCAGACAGGAGATGTTGAGAGGAAGTTACTTATGCCTTTGGATCAACTTTGGAGGGTCCATCACCTGATAAACTTACTCCTCTTGTCAATGTTGCTCTCAACTTTATTCTCAA
TGCTATGAATGATGAGAATAGTCATGTCAAGGACACAACTGTGTGGATCCTTGGGAGAATATTTGAATTTTTACATGGTTCAACATTGGAGACACCCATAATCACACAGTCAAATTTTCCACATATTTTATCAGTGCTACTTGAGAGCTTGAAGGATGCACCGAATGTTGTTGAAAAAGTATGTGGTGCTTTATATTTCC
TGGCCCAAGGGTATGAACATTGAATATGCAGGGGTAACCTCCTCTCCATACTCTCCATTTTTTATGAACATTTTGAGGCTCTTCATGATGCCTTACATAGGGAGGATGCAAGTGAATCTAGGATATGGACTGCAGCATATGAGACATTGAATGAGGTTGTCCGATGTTCAACTAAAGACACAACTCCTATTGTTATGCAT
CTTTTTCCTTTCATCATGATTAAGCTTAATGAAACTTTGGAAATGTAGAAACTATCATCAGAAGGCAAATAAAAATAGAGTGATTTGCAAGCACTTCTATATGGTTGCTTGCAAGTAATAAATGTCATTCCATTCATTCTGCTTGGGTTGATAGCATCTACTACCCCCAGG
>TRINITY_DN41153_c1_g1_i2 from sample A9 / Example unspliced isoform:CCATTCTTTAGGAATTGAATACTGGAATATTGGGACAAATAACAGGGTCAACTGTAGGCGAAATCCTTCGCGGCTGGTGCAAACCTTTCACGCCACAGTCAAAATATGGGTGCCTAAGTTACATTTGAGATGGGATTTGGAATAATTGCAGTCAGTTGGAGACACTGAACCTTACATCCAATTCATTAGCTAGAACTTTG
CCCCATTTTTCCTCACTCAGCTCTTTGCAAAGTTTGTACATGTCGATGAACAATTTCTTTGgtaagttctctgtttctgttacaaatatgactcaattatttgccttgaacttaaatgataaccctctagattagggcttaataccaaccaagacatttcgcttaaaacaccttaatcattgccattgtcgaactgtagc
ctgacagaacccatttttccttacatcgccaatctagcagagaatggattcctagggttttctgataattctttaacatgaactataccaaaagaaatcacaacgattatgaagctgtatgaagtgtaactctattataatgatcttacaagagatatcccttcaggatttcaaaacctcacgttagctcacggattgag
atttgttgcatatttcttcatggagAGGATCGAGTCTTCTGGTCGCAGCTCTCTAGCTATGGTGTGGATGTTGTTTCGATTTCTTCTTTTGCTGAATCAGAGTTCAAAGGTTTGGCAGATTTGCATTCATTAGTGTTGCCAGGAAGGTAAAAATATGTCCGTGAAGGTTACACAAATCCTTCTTGATGCACAATCTGCTA
ATGGTGCTGTTCGGAAGCATGCAAAAGAGAATATGAGGCAGTTCCAAGATCATAATTTGTTGTCCTTTCTCATATCCCTATTTGGGGATCTAGAAAATAATGAAAAGCATGTTGAAAGTCGTCAACTTGCAGGCTTGATTTTGAAGAACACATTAGATGCCAAGTAGCCACACCGAAAGGCTGAGTTAGTACAGAGATGG
ATCTCCCTAGATGGGACTGTGAAGATCCAAATCAAGGGGCTCTTACTACATACTCTTTCTTCACCTATTCTAGATGCTCGATCTACTTCACCACAGGTTATAGCAAAATTGTTGGTATTGAATTACCTCAAGGCCAATGGCCAGATCTCATCAGGACATTATCACTCAACATGGGTGGCCTACAAATAGAACTACCCGCA
CATCTCAAACAGGCAACTCTAGAAACTCTTGGATATCTTTGTGAGGAGGTTGCTGCAGATACTCTTGCTCATGATTGGGTGAATTCCATCCTTACAACTGTTGCAGGGAATGAATTCATCTGAGCTTAACAATGAGGTCAGGCTTGCTACTACTCAAGCATTGTATAATGCTTTGAATTTTGCTCAGATGAATTTTGATA
ATGATGTAGAGAGAGATTATATTATGAGAGTAGTGTGTGAAGCAAACTTGTCTCCAAAAGTATGGATTCAACAAGCTGCTTTTGCATGCCTAGTGTCAATATCTTCTACATATTATGAGAAGCTTGTTCCTTACATGCAAGACATATTTCATATTACAAAAAAGGCTGTCAAAACAGATGAAGAGCCTGTTGCTTTTCAA
GCGATCAAGTTTTGGAGTTCCATATGTGATGAAGAAATTGATATATTAGAGGAATATGCAGGAGATTTAAGTGGTGATTCAGATGTTCCTTGCATTTATTTTATTAAGCAACACTTCCTCCTCTTGTGCCAATGTTGTTAGAGACATTGTTGAAATAGGAAGAGGATCAAGATCAGGATGAGGGGGCATGGAATCTGTCT
ATGGATGGAGGAACTTGCTTGGGTCTTGTTGCTAGAACTGTGGGAGATGATGTTGTCCCCCCTTGTCGTGCCATTTGTAGAAGAAAACATATCAAATCCAGACAGGAGATGTTGAGAGGAAGTTACTTATGCCTTTGGATCAACTTTGGAGGGTCCATCACCTGATAAACTTACTCCTCTTGTCAATGTTGCTCTCAACT
TTATTCTCAATGCTATGAATGATGAGAATAGTCATGTCAAGGACACAACTGTGTGGATCCTTGGGAGAATATTTGAATTTTTACATGGTTCAACATTGGAGACACCCATAATCACACAGTCAAATTTTCCACATATTTTATCAGTGCTACTTGAGAGCTTGAAGGATGCACCGAATGTTGTTGAAAAAGTATGTGGTGCT
TTATATTTCCTGGCCCAAGGGTATGAACATTGAATATGCAGGGGTAACCTCCTCTCCATACTCTCCATTTTTTATGAACATTTTGAGGCTCTTCATGATGCCTTACATAGGGAGGATGCAAGTGAATCTAGGATATGGACTGCAGCATATGAGACATTGAATGAGGTTGTCCGATGTTCAACTAAAGACACAACTCCTAT
TGTTATGCATCTTTTTCCTTTCATCATGATTAAGCTTAATGAAACTTTGGAAATGTAGAAACTATCATCAGAAGGCAAATAAAAATAGAGTGATTTGCAAGCACTTCTATATGGTTGCTTGCAAGTAATAAATGTCATTCCATTCATTCTGCTTGGGTTGATAGCATCTACTACCCCCAGG
Intron 2 GTAAGTTCTC ... ATCCCTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 43.59 | 11 | 8 | 9 |
| A2 | 57.89 | 4 | 5 | 6 |
| A3 | 68 | 4 | 11 | 6 |
| A4 | 58.62 | 6 | 14 | 3 |
| A5 | 50 | 5 | 4 | 6 |
| A6 | 25 | 12 | 6 | 2 |
| A7 | 52.63 | 9 | 13 | 7 |
| A8 | 41.94 | 9 | 4 | 9 |
| A9 | 33.33 | 14 | 6 | 8 |
| A10 | 27.66 | 17 | 10 | 3 |
>TRINITY_DN41153_c1_g1_i8 from sample A9 / Example spliced isoformCCATTCTTTAGGAATTGAATACTGGAATATTGGGACAAATAACAGGGTCAACTGTAGGCGAAATCCTTCGCGGCTGGTGCAAACCTTTCACGCCACAGTCAAAATATGGGTGCCTAAGTTACATTTGAGATGGGATTTGGAATAATTGCAGTCAGTTGGAGACACTGAACCTTACATCCAATTCATTAGCTAGAACTTTG
CCCCATTTTTCCTCACTCAGCTCTTTGCAAAGTTTGTACATGTCGATGAACAATTTCTTTGGATTTCAAAACCTCACGTTAGCTCACGGATTGAGATTTGTTGCATATTTCTTCATGGAGAGGATCGAGTCTTCTGGTCGCAGCTCTCTAGCTATGGTGTGGATGTTGTTTCGATTTCTTCTTTTGCTGAATCAGAGTTC
AAAGGTTTGGCAGATTTGCATTCATTAGTGTTGCCAGGAAGGTAAAAATATGTCCGTGAAGGTTACACAAATCCTTCTTGATGCACAATCTGCTAATGGTGCTGTTCGGAAGCATGCAAAAGAGAATATGAGGCAGTTCCAAGATCATAATTTGTTGTCCTTTCTCATATCCCTATTTGGGGATCTAGAAAATAATGAAA
AGCATGTTGAAAGTCGTCAACTTGCAGGCTTGATTTTGAAGAACACATTAGATGCCAAGTAGCCACACCGAAAGGCTGAGTTAGTACAGAGATGGATCTCCCTAGATGGGACTGTGAAGATCCAAATCAAGGGGCTCTTACTACATACTCTTTCTTCACCTATTCTAGATGCTCGATCTACTTCACCACAGGTTATAGCA
AAATTGTTGGTATTGAATTACCTCAAGGCCAATGGCCAGATCTCATCAGGACATTATCACTCAACATGGGTGGCCTACAAATAGAACTACCCGCACATCTCAAACAGGCAACTCTAGAAACTCTTGGATATCTTTGTGAGGAGGTTGCTGCAGATACTCTTGCTCATGATTGGGTGAATTCCATCCTTACAACTGTTGCA
GGGAATGAATTCATCTGAGCTTAACAATGAGGTCAGGCTTGCTACTACTCAAGCATTGTATAATGCTTTGAATTTTGCTCAGATGAATTTTGATAATGATGTAGAGAGAGATTATATTATGAGAGTAGTGTGTGAAGCAAACTTGTCTCCAAAAGTATGGATTCAACAAGCTGCTTTTGCATGCCTAGTGTCAATATCTT
CTACATATTATGAGAAGCTTGTTCCTTACATGCAAGACATATTTCATATTACAAAAAAGGCTGTCAAAACAGATGAAGAGCCTGTTGCTTTTCAAGCGATCAAGTTTTGGAGTTCCATATGTGATGAAGAAATTGATATATTAGAGGAATATGCAGGAGATTTAAGTGGTGATTCAGATGTTCCTTGCATTTATTTTATT
AAGCAACACTTCCTCCTCTTGTGCCAATGTTGTTAGAGACATTGTTGAAATAGGAAGAGGATCAAGATCAGGATGAGGGGGCATGGAATCTGTCTATGGATGGAGGAACTTGCTTGGGTCTTGTTGCTAGAACTGTGGGAGATGATGTTGTCCCCCCTTGTCGTGCCATTTGTAGAAGAAAACATATCAAATCCAGACAG
GAGATGTTGAGAGGAAGTTACTTATGCCTTTGGATCAACTTTGGAGGGTCCATCACCTGATAAACTTACTCCTCTTGTCAATGTTGCTCTCAACTTTATTCTCAATGCTATGAATGATGAGAATAGTCATGTCAAGGACACAACTGTGTGGATCCTTGGGAGAATATTTGAATTTTTACATGGTTCAACATTGGAGACAC
CCATAATCACACAGTCAAATTTTCCACATATTTTATCAGTGCTACTTGAGAGCTTGAAGGATGCACCGAATGTTGTTGAAAAAGTATGTGGTGCTTTATATTTCCTGGCCCAAGGGTATGAACATTGAATATGCAGGGGTAACCTCCTCTCCATACTCTCCATTTTTTATGAACATTTTGAGGCTCTTCATGATGCCTTA
CATAGGGAGGATGCAAGTGAATCTAGGATATGGACTGCAGCATATGAGACATTGAATGAGGTTGTCCGATGTTCAACTAAAGACACAACTCCTATTGTTATGCATCTTTTTCCTTTCATCATGATTAAGCTTAATGAAACTTTGGAAATGTAGAAACTATCATCAGAAGGCAAATAAAAATAGAGTGATTTGCAAGCACT
TCTATATGGTTGCTTGCAAGTAATAAATGTCATTCCATTCATTCTGCTTGGGTTGATAGCATCTACTACCCCCAGG
>TRINITY_DN41153_c1_g1_i2 from sample A9 / Example unspliced isoform:CCATTCTTTAGGAATTGAATACTGGAATATTGGGACAAATAACAGGGTCAACTGTAGGCGAAATCCTTCGCGGCTGGTGCAAACCTTTCACGCCACAGTCAAAATATGGGTGCCTAAGTTACATTTGAGATGGGATTTGGAATAATTGCAGTCAGTTGGAGACACTGAACCTTACATCCAATTCATTAGCTAGAACTTTG
CCCCATTTTTCCTCACTCAGCTCTTTGCAAAGTTTGTACATGTCGATGAACAATTTCTTTGgtaagttctctgtttctgttacaaatatgactcaattatttgccttgaacttaaatgataaccctctagattagggcttaataccaaccaagacatttcgcttaaaacaccttaatcattgccattgtcgaactgtagc
ctgacagaacccatttttccttacatcgccaatctagcagagaatggattcctagggttttctgataattctttaacatgaactataccaaaagaaatcacaacgattatgaagctgtatgaagtgtaactctattataatgatcttacaagagatatcccttcagGATTTCAAAACCTCACGTTAGCTCACGGATTGAG
ATTTGTTGCATATTTCTTCATGGAGAGGATCGAGTCTTCTGGTCGCAGCTCTCTAGCTATGGTGTGGATGTTGTTTCGATTTCTTCTTTTGCTGAATCAGAGTTCAAAGGTTTGGCAGATTTGCATTCATTAGTGTTGCCAGGAAGGTAAAAATATGTCCGTGAAGGTTACACAAATCCTTCTTGATGCACAATCTGCTA
ATGGTGCTGTTCGGAAGCATGCAAAAGAGAATATGAGGCAGTTCCAAGATCATAATTTGTTGTCCTTTCTCATATCCCTATTTGGGGATCTAGAAAATAATGAAAAGCATGTTGAAAGTCGTCAACTTGCAGGCTTGATTTTGAAGAACACATTAGATGCCAAGTAGCCACACCGAAAGGCTGAGTTAGTACAGAGATGG
ATCTCCCTAGATGGGACTGTGAAGATCCAAATCAAGGGGCTCTTACTACATACTCTTTCTTCACCTATTCTAGATGCTCGATCTACTTCACCACAGGTTATAGCAAAATTGTTGGTATTGAATTACCTCAAGGCCAATGGCCAGATCTCATCAGGACATTATCACTCAACATGGGTGGCCTACAAATAGAACTACCCGCA
CATCTCAAACAGGCAACTCTAGAAACTCTTGGATATCTTTGTGAGGAGGTTGCTGCAGATACTCTTGCTCATGATTGGGTGAATTCCATCCTTACAACTGTTGCAGGGAATGAATTCATCTGAGCTTAACAATGAGGTCAGGCTTGCTACTACTCAAGCATTGTATAATGCTTTGAATTTTGCTCAGATGAATTTTGATA
ATGATGTAGAGAGAGATTATATTATGAGAGTAGTGTGTGAAGCAAACTTGTCTCCAAAAGTATGGATTCAACAAGCTGCTTTTGCATGCCTAGTGTCAATATCTTCTACATATTATGAGAAGCTTGTTCCTTACATGCAAGACATATTTCATATTACAAAAAAGGCTGTCAAAACAGATGAAGAGCCTGTTGCTTTTCAA
GCGATCAAGTTTTGGAGTTCCATATGTGATGAAGAAATTGATATATTAGAGGAATATGCAGGAGATTTAAGTGGTGATTCAGATGTTCCTTGCATTTATTTTATTAAGCAACACTTCCTCCTCTTGTGCCAATGTTGTTAGAGACATTGTTGAAATAGGAAGAGGATCAAGATCAGGATGAGGGGGCATGGAATCTGTCT
ATGGATGGAGGAACTTGCTTGGGTCTTGTTGCTAGAACTGTGGGAGATGATGTTGTCCCCCCTTGTCGTGCCATTTGTAGAAGAAAACATATCAAATCCAGACAGGAGATGTTGAGAGGAAGTTACTTATGCCTTTGGATCAACTTTGGAGGGTCCATCACCTGATAAACTTACTCCTCTTGTCAATGTTGCTCTCAACT
TTATTCTCAATGCTATGAATGATGAGAATAGTCATGTCAAGGACACAACTGTGTGGATCCTTGGGAGAATATTTGAATTTTTACATGGTTCAACATTGGAGACACCCATAATCACACAGTCAAATTTTCCACATATTTTATCAGTGCTACTTGAGAGCTTGAAGGATGCACCGAATGTTGTTGAAAAAGTATGTGGTGCT
TTATATTTCCTGGCCCAAGGGTATGAACATTGAATATGCAGGGGTAACCTCCTCTCCATACTCTCCATTTTTTATGAACATTTTGAGGCTCTTCATGATGCCTTACATAGGGAGGATGCAAGTGAATCTAGGATATGGACTGCAGCATATGAGACATTGAATGAGGTTGTCCGATGTTCAACTAAAGACACAACTCCTAT
TGTTATGCATCTTTTTCCTTTCATCATGATTAAGCTTAATGAAACTTTGGAAATGTAGAAACTATCATCAGAAGGCAAATAAAAATAGAGTGATTTGCAAGCACTTCTATATGGTTGCTTGCAAGTAATAAATGTCATTCCATTCATTCTGCTTGGGTTGATAGCATCTACTACCCCCAGG