NA ----> NA
Intron 1 GTAATCTTCT ... TTTGATGTAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 57.14 | 3 | 2 | 4 |
| A2 | -1 | 0 | 0 | 0 |
| A3 | 0 | 7 | 0 | 0 |
| A4 | 53.85 | 6 | 0 | 7 |
| A5 | 50 | 2 | 0 | 2 |
| A6 | 9.68 | 28 | 0 | 3 |
| A7 | 5.13 | 37 | 0 | 2 |
| A8 | 0 | 30 | 0 | 0 |
| A9 | 12.9 | 27 | 0 | 4 |
| A10 | 0 | 22 | 0 | 0 |
>TRINITY_DN39026_c0_g2_i2 from sample A9 / Example spliced isoformCCTCATTTTACAATTGTCAAAAAACCACAAGGTTACTTCATTTTACAGATTTCAAAAAACTAATCTTCGCTAGGGGTTAAGGGTGTTGGGTAACAAGTAACAGAAGCCTGCGAAATCCACAAGCCCTTCACCTAGCCCTGGAACCACAAGTTCATGGTCACTTGGCCCAGAAAACGAAGCCAACTAGCCCTTGGTCACAT
GGAAACCTGACCTAGAACACCGCGGCGTCAAGTAAGGAACCAGTAAAGAATGAACGTGGATGCGATGTCGTACAGTATTCATAGCATAGGCAGGACCAGCTAGCTACATACAGGAATGAAAGGCATTCAAAGATTCAAAGGGGACTGGATTTGTATTGATGATTTAATTGCAGGAATATGTAGTGGAGGTGATGATGAGA
GGCCCATGCATTCCACATTCATTCATATTTATATTCTTCATCATCATCATCAACTTCCACTCTTCCTGCTGCCATTCATTCAATGATTGCGAATCTTTTCACATCATCACACCGGAGATACTCTTTCCCACATGAAAGTCTGTGTTGTTTCTTGTTCAAAAAAACCCTCAAATGCCAATTTCCACTTACCAATAATAATG
GCGATACCAGTATGACGCAATGGTGAGGCTGTACACCTACTCTCATTCGCCTTATATATACGCGCCTGCGGTTTCCAGTTTTCATCTCAGCTGCCCAATTTCTCATTTCCTGGAATTCTAAAAAATATTGTGGAGGGGGAGGGTTTATCAGGGGTTTAGTTCTGCTCTTTAGGATGCCGTTGAATAGCATTTGGAGCGTC
TCGAGTTCGAGTCGCTGCAGACCTGAGCAAAGGCTTTGGTTTGGCCGTGAGCAGGTTGTATTGGGGCAATTTCTCCGGCGGCGTTCGCTCTGCATTAAACAGCGTATTAAAAGGCGTCCGATTTTGTTCTTTTCGGCTCCGAGGGCGGCCAAAGCGTGGCTTGCGTTCAGAAGAAGGGTTTTTGTAACTAGGTTCTCTTA
TCCAATGAAATTATCTGTTGCAAGCAGTTGCTGTGGTATAAGGTGGTTGTTGGCTATTTTGTGGTTGATGTAAAGTAGTTTTGTAAGCGTGGCATCGGCGGAGTGTGTTCTGTCTTCAGTGCTTTTATTGCATTGCCTGCAAACCCTTTCTGTTGAAAATTGGGCTGGCTAGGAATTGAACCCAGGATTTGCTTTACGAA
TGAGCTACACGCCCTTCGATGATGGGCATCTTTACCGGTTTGATGTCAAGGTGTGAATTGGTACCTCCAACAACCACTGGGCTAATGCCAAATGGTGTAGTAGCACATAGGCACCTTTGGCAGTGACTTTTTTGGGGGAGTAGTTCAAGTTT
>TRINITY_DN39026_c0_g2_i3 from sample A9 / Example unspliced isoform:GTGGCTTGCGTTCAGAAGAAGgtaatcttctgttaaggttctgagtgttttctatcattttgggaaatcgaggaatttcacctggcttttccctcttttctctgttagcgccatgttgttcttgacgtgatttgaacacttgacctcgtcttaaaacggaatctcctcatcatgaggtgcctttacgctttgtgggttct
cttcgttgcctgtgtattttgtgggttctcgtccttgtgattgttgtcttatttatgccttcttagttgcaagcttactgcaaaacaaagtgggcttccatgggaaaagattctgacagaaagctgggattaattcttgtcttcttacagaaaagaaaataatgtgcaaacattttttttcttgatttcttcattttgta
gtctagtgcgaccacgtttggtgtattggaccagaatacaacaagtttaacagtgccattctttgatgtagGGTTTTTGTAACTAGGTTCTCTTATCCAATGAAATTATCTGTTGCAAGCAGTTGCTGTGGTATAAGGTGGTTGTTGGCTATTTTGTGGTTGATGTAAAGTAGTTTTGTAAGCGTGGCATCGGCGGAGTG
TGTTCTGTCTTCAGTGCTTTTATTGCATTGCCTGCAAACCCTTTCTGTTGAAAATTGGGCTGGCTAGGAATTGAACCCAGGATTTGCTTTACGAATGAGCTACACGCCCTTCGATGATGGGCATCTTTACCGGTTTGATGTCAAGGTGTGAATTGGTACCTCCAACAACCACTGGGCTAATGCCAAATGGTGTAGTAGCA
CATAGGCACCTTTGGCAGTGACTTTTTTGGGGGAGTAGTTCAAGTTT