sp|Q39089|PAC_ARATH ----> Protein PALE CRESS, chloroplastic
Intron 1 GTAAACTCAG ... TCTTTTTCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 55.56 | 2 | 3 | 2 |
| A2 | 80 | 1 | 1 | 7 |
| A3 | 68 | 4 | 13 | 4 |
| A4 | 53.85 | 3 | 3 | 4 |
| A5 | 55.56 | 2 | 5 | 0 |
| A6 | 72.36 | 17 | 62 | 27 |
| A7 | 60 | 27 | 56 | 25 |
| A8 | 64.29 | 35 | 106 | 20 |
| A9 | 72.73 | 18 | 75 | 21 |
| A10 | 66.67 | 13 | 37 | 15 |
>TRINITY_DN37262_c0_g1_i2 from sample A9 / Example spliced isoformCTAAGTTTTAGAGGACGGCAGCCTCCCAATAGAAAAGAATTACAATCCCTCCTTAAAAATTTGAACCTGGGCTTCCATCGGATAACCATAAAACCCCACCGCTGAATCACACCCTCAACCGGCTGAATCACACCCTCAACCCAATCCTGAAAGGCTCTAATGAGATAAGCGAAAGGATATGATCTTAAACGGTTGCGTCG
TACTCTTATTTTTAAATCTTCTTGAGCTCAGTACTCGCATTCCAATTCGAAACTTGGCAGACATAAACAACCAATCCACATGCAAGCTGGTTCAGGTCGTTCATCGGGGAGCCTTTTCCTCTTATCCGAAAAATAAGAAATATCGGCAAGACTTTCGATAGAGCAACAGGCTACGGTTGAAGTGAGCAAGCGATGGATTC
TGCTACACTTGTTCCCAGATTATGGATTCCATTCACTGGCGGAGGTACAGTGGCAAAGACATCAAGAAGAAGTTTCCCCGTCAGTCGGAAACCAACTTTAAAATTTTCAGGTTTCTACGAAAGCGATAGAAGAAGGGTATTATCCACCAGAATTCCCAGAGCTAAGGACACGGAGTTTACATTCCCTCCAGAGTACTATG
ATGATGAGTGGCAGGCAAAGCAGCGTAAGAAAACAAAGGAGTTAAGAAGACGGCGGAAAGAAGAAGACGCTGAGGAGGATAGAAAAAGGGAAGAGTACCGAGAAATTGGTTCTCGATTTAGGGGCTACCCTGAAAAAGAAGTCAAGAATGCAAAGCTCCTGGTTTCAAGCTTTATAAAATCAGGCGAAGATGTTGAAGAG
ATGATAGTGGAAGCTGCTGAGAAGGGAGAGCTCACGGAATTAGTTTTATTAGTCATATGGAATCGTCTAGAAGTTGCTCGACATGATCATGAGAAAGATGCCATTCAAGCTCTTGATCTCTTATACAGGCGAGTTGAGACAGAAATATTGAAGAGGAATTCAAGTTCAGCGATGCAGTTACTGAATGAGCTCTTGAACCT
GCATGATGGATTTAATGACGACGAGTGGTTACAACGATGCAGAACATGCATGTTGAATATCTTCCCACGTGAAGATCCTTTCACCATATTTGCGCCTCCGGGAATCAATCCTTTTGAGGGTCCAATTGATTTGCCACCAGAGGACGATGACATACTTTTCCGAATTGATTTTATTAGAGAGACTGATGCGTTATTACAGG
AGCTAAAAGGGGAAGAAAAGAGTGAGACTATGATGGGTCTGGATCCTCAATCTATTGCAATTAGCTTAAAACTGCAAGAGAAGGAAAGGACTCTACAGCAAGTTAAAGCCTTGAGGGATTTAGCAATATCACTGAAATGACCACCATGCCTACACATGTGAAAACAACTAAATATTTCAGTTTATTTCAAGTACATGCAA
ATGAACATATGCATGTTGGTTATTAATAATGAGACTTTCATCTAATAATATTTATTGGTTACATTTCAAGGTTATAAGCTTTTTGGTTTTATCAAAGTGTGGGACTGACTGTTAAGGGAATTGGTTGTAAGTTATTTGAGAATCTCAAGATTTCCATTGGACCACAAGGAGGTCAGAAGAGCTTTAAGAAACTCTCTTCG
AGAAAAAAATAAGAATAAAAGAATCATTTATTTAAAATTGTGCAGTATTCACTTTCAAGGAGATTTATATGGTGCAGAATTGTTTGAGAATCATATATTAAAATTGTGTAGTATTGACTTTCAAGAAG
>TRINITY_DN37262_c0_g1_i1 from sample A9 / Example unspliced isoform:CTAAGTTTTAGAGGACGGCAGCCTCCCAATAGAAAAGAATTACAATCCCTCCTTAAAAATTTGAACCTGGGCTTCCATCGGATAACCATAAAACCCCACCGCTGAATCACACCCTCAACCGGCTGAATCACACCCTCAACCCAATCCTGAAAGGCTCTAATGAGATAAGCGAAAGGATATGATCTTAAACGGTTGCGTCG
TACTCTTATTTTTAAATCTTCTTGAGCTCAGTACTCGCATTCCAATTCGAAACTTGGCAGACATAAACAACCAATCCACATGCAAGCTGGTTCAGGTCGTTCATCGGGGAGCCTTTTCCTCTTATCCGAAAAATAAGAAATATCGGCAAGACTTTCGATAGAGCAACAGGCTACGGTTGAAGTGAGCAAGCGATGGATTC
TGCTACACTTGTTCCCAGATTATGGATTCCATTCACTGGCGGAGGTACAGTGGCAAAGACATCAAGAAGAAGTTTCCCCGTCAGTCGGAAACCAACTTTAAAATTTTCAGGTTTCTACGAAAGCGATAGAAGAAGGGTATTATCCACCAGAATTCCCAGAGCTAAGGACACGGAGTTTACATTCCCTCCAGAGTACTATG
ATGATGAGTGGCAGGCAAAGCAGCGTAAGAAAACAAAGGAGTTAAGAAGACGGCGGAAAGAAGAAGACGCTGAGGAGGATAGAAAAAGGGAAGAGTACCGAGAAATTGGTTCTCGATTTAGGGGCTACCCTGAAAAAGAAGTCAAGAATGCAAAGCTCCTGGTTTCAAGCTTTATAAAATCAGGCGAAGATGTTGAAGAG
ATGATAGTGGAAGCTGCTGAGAAGGGAGAGCTCACGGAATTAGTTTTATTAGTCATATGGAATCGTCTAGAAGTTGCTCGACATGATCATGAGAAAGATGCCATTCAAGCTCTTGATCTCTTATACAGGCGAGTTGAGACAGAAATATTGAAGAGGAATTCAAGTTCAGCGATGCAGTTACTGAATGAGCTCTTGAACCT
GCATGATGGATTTAATGACGACGAGTGGTTACAACGATGCAGAACATGCATGTTGAATATCTTCCCACGTGAAGATCCTTTCACCATATTTGCGCCTCCGGGAATCAATCCTTTTGAGGGTCCAATTGATTTGCCACCAGAGGACGATGACATACTTTTCCGAATTGATTTTATTAGAGAGACTGATGCGTTATTACAGG
AGCTAAAAGGGGAAGAAAAGAGTGAGACTATGATGGGTCTGGATCCTCAATCTATTGCAATTAGCTTAAAACTGCAAGAGAAGGAAAGGACTCTACAGCAAGTTAAAGCCTTGAGGGATTTAGCAATATCACTGAAATGgtaaactcaggagtagtcatataaagtttgcttaatttttctgagcaatggaatacttaca
tggttttttaagtgggcattatcttttcatgtaaatttctgtttaaccaagaagttgtaaatatcagttagtgtgttatccaatgactaaaatatttaatgacgaattccttctttttcagACCACCATGCCTACACATGTGAAAACAACTAAATATTTCAGTTTATTTCAAGTACATGCAAATGAACATATGCATGTTG
GTTATTAATAATGAGACTTTCATCTAATAATATTTATTGGTTACATTTCAAGGTTATAAGCTTTTTGGTTTTATCAAAGTGTGGGACTGACTGTTAAGGGAATTGGTTGTAAGTTATTTGAGAATCTCAAGATTTCCATTGGACCACAAGGAGGTCAGAAGAGCTTTAAGAAACTCTCTTCGAGAAAAAAATAAGAATAA
AAGAATCATTTATTTAAAATTGTGCAGTATTCACTTTCAAGGAGATTTATATGGTGCAGAATTGTTTGAGAATCATATATTAAAATTGTGTAGTATTGACTTTCAAGAAG