sp|Q8W468|ARI8_ARATH ----> Probable E3 ubiquitin-protein ligase ARI8
Intron 1 GCAAGTAATC ... TGTTTGGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 17.24 | 36 | 9 | 6 |
| A2 | 41.54 | 17.6 | 12 | 13 |
| A3 | 28.99 | 28.2 | 16 | 7 |
| A4 | 23.12 | 31.6 | 9 | 10 |
| A5 | 24.41 | 12.4 | 4 | 4 |
| A6 | 20.7 | 9.6 | 2 | 3 |
| A7 | 24.44 | 28 | 10 | 8 |
| A8 | 13.51 | 25.6 | 7 | 1 |
| A9 | 13.07 | 26.6 | 7 | 1 |
| A10 | 11.63 | 19 | 5 | 0 |
>TRINITY_DN118464_c1_g3_i6 from sample A2 / Example spliced isoformGCGATATATTGGGAGTTGGTATGGTTAGCAGAGAAGGTAAAAAGGAGAAATTAATGCAAAGCAGAAGAGAAGAGCAGCAACAGTTGAGGAAGAAGCAGGAAGCGGAGGTGGAGGCACCATCACCATCGTCATACCACTCAGCTTGACTTGACTGGAACCCGAATGCGCAAGCTGGGGTTTACTTCAGCAACCCATGTTCG
AAACCCCTAAACCCCCCTGACACCAAAACAAATTTCTCCATCTGCTACTCTTTCCCACAAAATGGACTCGGAGGACGATATGCACGATGCCTACGACGGAGATTACCTTGACGACAGCGATGGAGGAGAAGGAGGACGAATTTTAGATTTTGACAACGACGATGACGTGGACGACGACGGCGATTATGGCTTCGTCGATA
CGGCAGCAGACGATCACGACTCTACCTGCCGTTCCCAGGTGAACTACACAATTTTAAGTGAGGAAGACATTCTTCAATGTGAAGAAGAGGCAGCTACAAGTATTTCTACAGTTCTTTCCATACCAAGGGAGAATGCTGGCATACTTTTGCGGCATTTCAAATGGAGTGTCAGTAAAGTCAATGATGAATGGTTTGCAGAC
GAGGAGAATGTGCGGAAGACTGTGGGGCTGTTGGAAAAACCAATTGTAGAAATAAGATCAAATGTAAAGGAGTTAACTTGTGGTATATGCTTTGAAACTTGTGCTCGTGAAAGAATGAAAGCAGCTGTTTGTGGCCATTGCTTCTGTGACACATGCTGGGCAGGTTACATCCATACATCAATAAACGATGGACCTGGATG
CCTTACATTACGATGTCCTGATCCGTCGTGTGTTGCTGCTGTTGGCGAAGATATGGTTTTTTCTTTGGTTTCTAATGAAGATAAAAAGAAGTACAGGCGCTACCTTCTTAGATCATATGTTGAAGACAACAGAAAGGCTAAGTGGTGCCCAGCACCCGACTGTGAATATGCTGTAGAATTTGTCCTTGGAAGTGGCTGTT
ATGACATTTCTTGCAAATGCTCGTATGTCTTTTGCTGGAATTGTTTGGAGGAAGCTCATCGTCCTGTAGACTGTGATACAGTGGAAAGGTGGATCTTGAAGAACAGTGCAGAGTCAGAAAACATGAACTGGATACTTGCGAATTCAAAGCCATGCCCAAAGTGCAAGCGTCCAATCGAGAAAAATCAAGGTTGCATGCAT
ATTACCTGTACACCACCATGTAAATTCGAATTTTGCTGGCTTTGTCTGGGTGCCTGGTCAGATCATGGTGAAAGAACAGGTGGTTTTTATGCCTGCAACCGATATGAGACAGCAAAACAGGAAGGAGTTTATGATGAGTCGGAGCGGA
>TRINITY_DN118464_c1_g3_i9 from sample A2 / Example unspliced isoform:GCGATATATTGGGAGTTGGTATGGTTAGCAGAGAAGGTAAAAAGGAGAAATTAATGCAAAGCAGAAGAGAAGAGCAGCAACAGTTGAGGAAGAAGCAGGAAGCGGAGGTGGAGGCACCATCACCATCGTCATACCACTCAGCTTGACTTGACTGGAACCCGAATGCGCAAGCTGGGGTTTACTTCAGCAACCCATGTTCG
AAACCCCTAAACCCCCCTGACACCAAAACAAATTTCTCCATCTGCTACTCTTTCCCACAAAATGGACTCGGAGGACGATATGCACGATGCCTACGACGGAGATTACCTTGACGACAGCGATGGAGGAGAAGGAGGACGAATTTTAGATTTTGACAACGACGATGACGTGGACGACGACGGCGATTATGGCTTCGTCGATA
CGGCAGCAGACGATCACGACTCTACCTGCCGTTCCCAGGTGAACTACACAATTTTAAGTGAGGAAGACATTCTTCAATGTGAAGAAGAGGCAGCTACAAGTATTTCTACAGTTCTTTCCATACCAAGGGAGAATGCTGGCATACTTTTGCGGCATTTCAAATGGAGTGTCAGTAAAGTCAATGATGAATGGTTTGCAGAC
GAGGAGAATGTGCGGAAGACTGTGGGGCTGTTGGAAAAACCAATTGTAGAAATAAGATCAAATGTAAAGGAGgcaagtaatcttggtgacttgtgtgacagctattttaatcatgaaaatgcaattgactatggatcaaaggaatcctttggtttacttcatatcattagacacacagtgtttcatgtttggcagTTAAC
TTGTGGTATATGCTTTGAAACTTGTGCTCGTGAAAGAATGAAAGCAGCTGTTTGTGGCCATTGCTTCTGTGACACATGCTGGGCAGGTTACATCCATACATCAATAAACGATGGACCTGGATGCCTTACATTACGATGTCCTGATCCGTCGTGTGTTGCTGCTGTTGGCGAAGATATGGTTTTTTCTTTGGTTTCTAATG
AAGATAAAAAGAAGTACAGGCGCTACCTTCTTAGATCATATGTTGAAGACAACAGAAAGGCTAAGTGGTGCCCAGCACCCGACTGTGAATATGCTGTAGAATTTGTCCTTGGAAGTGGCTGTTATGACATTTCTTGCAAATGCTCGTATGTCTTTTGCTGGAATTGTTTGGAGGAAGCTCATCGTCCTGTAGACTGTGAT
ACAGTGGAAAGGTGGATCTTGAAGAACAGTGCAGAGTCAGAAAACATGAACTGGATACTTGCGAATTCAAAGCCATGCCCAAAGTGCAAGCGTCCAATCGAGAAAAATCAAGGTTGCATGCATATTACCTGTACACCACCATGTAAATTCGAATTTTGCTGGCTTTGTCTGGGTGCCTGGTCAGATCATGGTGAAAGAAC
AGGTGGTTTTTATGCCTGCAACCGATATGAGACAGCAAAACAGGAAGGAGTTTATGATGAGTCGGAGCGGA
Intron 2 GTATGTCTAC ... ATCTGTACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 32.35 | 23 | 11 | 2 |
| A2 | 40 | 24 | 16 | 1 |
| A3 | 38.46 | 24 | 15 | 4 |
| A4 | 31.25 | 22 | 10 | 0 |
| A5 | 41.38 | 17 | 12 | 0 |
| A6 | 37.5 | 5 | 3 | 0 |
| A7 | 41.67 | 28 | 20 | 0 |
| A8 | 30.56 | 25 | 11 | 0 |
| A9 | 26 | 37 | 13 | 2 |
| A10 | 20 | 32 | 8 | 0 |
>TRINITY_DN118464_c1_g3_i6 from sample A2 / Example spliced isoformGCGATATATTGGGAGTTGGTATGGTTAGCAGAGAAGGTAAAAAGGAGAAATTAATGCAAAGCAGAAGAGAAGAGCAGCAACAGTTGAGGAAGAAGCAGGAAGCGGAGGTGGAGGCACCATCACCATCGTCATACCACTCAGCTTGACTTGACTGGAACCCGAATGCGCAAGCTGGGGTTTACTTCAGCAACCCATGTTCG
AAACCCCTAAACCCCCCTGACACCAAAACAAATTTCTCCATCTGCTACTCTTTCCCACAAAATGGACTCGGAGGACGATATGCACGATGCCTACGACGGAGATTACCTTGACGACAGCGATGGAGGAGAAGGAGGACGAATTTTAGATTTTGACAACGACGATGACGTGGACGACGACGGCGATTATGGCTTCGTCGATA
CGGCAGCAGACGATCACGACTCTACCTGCCGTTCCCAGGTGAACTACACAATTTTAAGTGAGGAAGACATTCTTCAATGTGAAGAAGAGGCAGCTACAAGTATTTCTACAGTTCTTTCCATACCAAGGGAGAATGCTGGCATACTTTTGCGGCATTTCAAATGGAGTGTCAGTAAAGTCAATGATGAATGGTTTGCAGAC
GAGGAGAATGTGCGGAAGACTGTGGGGCTGTTGGAAAAACCAATTGTAGAAATAAGATCAAATGTAAAGGAGTTAACTTGTGGTATATGCTTTGAAACTTGTGCTCGTGAAAGAATGAAAGCAGCTGTTTGTGGCCATTGCTTCTGTGACACATGCTGGGCAGGTTACATCCATACATCAATAAACGATGGACCTGGATG
CCTTACATTACGATGTCCTGATCCGTCGTGTGTTGCTGCTGTTGGCGAAGATATGGTTTTTTCTTTGGTTTCTAATGAAGATAAAAAGAAGTACAGGCGCTACCTTCTTAGATCATATGTTGAAGACAACAGAAAGGCTAAGTGGTGCCCAGCACCCGACTGTGAATATGCTGTAGAATTTGTCCTTGGAAGTGGCTGTT
ATGACATTTCTTGCAAATGCTCGTATGTCTTTTGCTGGAATTGTTTGGAGGAAGCTCATCGTCCTGTAGACTGTGATACAGTGGAAAGGTGGATCTTGAAGAACAGTGCAGAGTCAGAAAACATGAACTGGATACTTGCGAATTCAAAGCCATGCCCAAAGTGCAAGCGTCCAATCGAGAAAAATCAAGGTTGCATGCAT
ATTACCTGTACACCACCATGTAAATTCGAATTTTGCTGGCTTTGTCTGGGTGCCTGGTCAGATCATGGTGAAAGAACAGGTGGTTTTTATGCCTGCAACCGATATGAGACAGCAAAACAGGAAGGAGTTTATGATGAGTCGGAGCGGA
>TRINITY_DN118464_c1_g3_i4 from sample A2 / Example unspliced isoform:GCGATATATTGGGAGTTGGTATGGTTAGCAGAGAAGGTAAAAAGGAGAAATTAATGCAAAGCAGAAGAGAAGAGCAGCAACAGTTGAGGAAGAAGCAGGAAGCGGAGGTGGAGGCACCATCACCATCGTCATACCACTCAGCTTGACTTGACTGGAACCCGAATGCGCAAGCTGGGGTTTACTTCAGCAACCCATGTTCG
AAACCCCTAAACCCCCCTGACACCAAAACAAATTTCTCCATCTGCTACTCTTTCCCACAAAATGGACTCGGAGGACGATATGCACGATGCCTACGACGGAGATTACCTTGACGACAGCGATGGAGGAGAAGGAGGACGAATTTTAGATTTTGACAACGACGATGACGTGGACGACGACGGCGATTATGGCTTCGTCGATA
CGGCAGCAGACGATCACGACTCTACCTGCCGTTCCCAGGTGAACTACACAATTTTAAGTGAGGAAGACATTCTTCAATGTGAAGAAGAGGCAGCTACAAGTATTTCTACAGTTCTTTCCATACCAAGGGAGAATGCTGGCATACTTTTGCGGCATTTCAAATGGAGTGTCAGTAAAGTCAATGATGAATGGTTTGCAGAC
GAGGAGAATGTGCGGAAGACTGTGGGGCTGTTGGAAAAACCAATTGTAGAAATAAGATCAAATGTAAAGGAGTTAACTTGTGGTATATGCTTTGAAACTTGTGCTCGTGAAAGAATGAAAGCAGCTGTTTGTGGCCATTGCTTCTGTGACACATGCTGGGCAGGTTACATCCATACATCAATAAACGATGGACCTGGATG
CCTTACATTACGATGTCCTGATCCGTCGTGTGTTGCTGCTGTTGGCGAAGATATGGTTTTTTCTTTGGTTTCTAATGAAGATAAAAAGAAGTACAGGCGCTACCTTCTTAGATCATATGTTGAAGACAACAGAAAGGCTAAGTGGTGCCCAGCACCCGACTGTGAATATGCTGTAGAATTTGTCCTTGGAAGTGGCTGTT
ATGACATTTCTTGCAAATGCTCGTATGTCTTTTGCTGGAATTGTTTGGAGGAAGCTCATCGTCCTGTAGACTGTGATACAGTGGAAAGGTGGATCTTGAAGAACAGTGCAGAGTCAGAAAACATGAACTGGATACTTGCGAATTCAAAGCCATGCCCAAAGTGCAAGCGTCCAATCGAGAAAAATCAAGGTTGCATGCAT
ATTACCTGTACACCACCATGTAAATTCGAATTTTGCTGgtatgtctactgtaaccatttaacatttcaaacttattttatcatagcatactgcttgttttgaaggattgaaagttttatgtatcttcatttggattttattatgaattcttgtctttcttccaagttacattggatgaagttcatatttggttgactact
atacagggatgatatgagtgaaaacatgatttgagcttcaaatcacaaatgcaaataactgttcatgccttttgaactaaaggtgtttatgagttatgagaaaatcactttcatatggaatacttgtgaatctgtacagGCTTTGTCTGGGTGCCTGG