NA ----> NA
Intron 1 GTTGTATTAT ... ATTTCTGCAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 9.21 | 144.3 | 5 | 15 |
| A2 | 9.02 | 187.2 | 4 | 19.7 |
| A3 | 6.88 | 187.2 | 0 | 14.3 |
| A4 | 9.54 | 110.1 | 1 | 12 |
| A5 | 3.55 | 68.3 | 0 | 2.7 |
| A6 | 7.1 | 327.9 | 0 | 28.3 |
| A7 | 6.95 | 678.9 | 0 | 57 |
| A8 | 6.16 | 561 | 0 | 41 |
| A9 | 6.07 | 723.3 | 4 | 51 |
| A10 | 6.04 | 582.3 | 1.7 | 41.3 |
>TRINITY_DN109794_c0_g1_i6 from sample A3 / Example spliced isoformGTGTTGGAACCATGAAGAGATCCTTAACCCCTTGTGGAGTTTTTCTTTTATTCCTGTAGAAGTTGACACAAGCTTCAAAGTCCTTCAAATGTCACTCTTTGCACATCAGATTTATCAGCTTTCATACATTTGAGATCTGTGGCAATTGTCTTTTTCCAATGGCGGACGAAGAGGACGTGGTAGCTGCTGCAGAGCAAGTA
ATGAGAGAATGGACGGAAGCCTTTGACGAAGGATCCCGGCGCATTGAATCAATTGAGACCTGTGGCATCTCCGGAGGCACAGCGGATGCCAACAACCGTCCCAGGCTGAATGCCATGGTGCAGGATTGCCTTGCTAAAATGCGATCCGCGAAGTTACGCCTGGACCTCCTCGCACAGCAACAGCCCACAGATCAGCAGAT
GGAATCCTGCCTGGCCACATTGGCGCAATGGGACAATCAATACAAAGCTCTGCATTTGAGGTTAAGGAATGCGAATTTAAAAGCCAAAGAGAATATTAGTAAAGCCATTCAGGAAGAGAGAGAGCTCCTGTTGGGTGGCGGGGAGGAATCCACTGTTCGGCGACGGAACTTACGAACAAAGGCTGAACTGACAGCAGCTG
CTGAAGGTGTTACTGAAAGCCTTCGGAGGAGTCGTCAAATGATGATTCAGGAAGTTGAGAGGGGCGCTACTACTCTGACAACATTAGATCAGTCCACTGAGACACTACGAAAAGCTGACTCTGAATATAAAGGGCACCGTTCTTTACTGATGAGAGCTAGACAACTTCTAAAGGTGATGCGACGACAAGATGTTCTGGAT
AGGATAATAATGGTAGCTGGATTTCTTTTCTTTTGCATAGTGGTTTTATACATATTCACCAAGCGCGTTGGGCTTTTGAAGTTGCAGCGTAAACTGTCTGACTCAATGAGAACAGATGCTACTGATAGAAATTCAGTTTCAGATTATGCACATCATGCAAGCTGTCAATATCTTGAATATGATGAGATGAGTGTATCTGT
TGGAACACACGAAAGAAAAGTTGCTAGGGATACACATGCTCCCCCAGATCCAACAATTATTGACAAAAGTGAACAGAAAATCAGGTTGAATCCAGTAAATGTTGATGTGCAGCTAGATATAAATGATGAAGAAGAATCAGTTCCGCATTTGGCTTCCAATACAAGGGATACAAGTCCTTCCTCAGATCCAATATTTTTGG
ACAAAAGTAATCAGTTCCGCATTTGGCTTCCAATACAAGGGATA
>TRINITY_DN109794_c0_g1_i7 from sample A3 / Example unspliced isoform:GAGTCGTCAAATGATGATTCAGgttgtattataattaatttaacttattgtttatcataggattttttttgtcatacagggtttgttgaatagtgtgattaataatgtcaaaactaactcacaaaaatttctgcagGAAGTTGAGAGGGGCGCTACTACTCTGACAACATTAGATCAGTCCACTGAGACACTACGAAAAG
CTGACTCTGAATATAAAGGGCACCGTTCTTTACTGATGAGAGCTAGACAACTTCTAAAGGTGATGCGACGACAAGATGTTCTGGATAGGATAATAATGGTAGCTGGATTTCTTTTCTTTTGCATAGTGGTTTTATACATATTCACCAAGCGCATTGGGATTTTGAAGTTGCAGCGTAAATTGTCTGACTCAATGAGAACA
GATGCTACTGATAGAAATTCAGTTTCAGATTATGCACATCATGCAAGCTGTCAATATCTTGAATATGATGAGATGAGTGTATCTGTTGGAACACACGAAAGAAAAGTTGCTAGGGATACACATGCTCCCCCAGATCCAACAATTATTGACAAAAGTGAACAGAAAATCAGGTTGAATCCAGTAAATGTTGATGTGCAGCT
AGATATAAATGATGAAGAAGAATCAGTTCCGCATTTGGCTTCCAATACAAGGGATACAAGTCCTTCCTCAGATCCAATATTTTTGGACAAAAGTAATCAGAGAACCAGGTTGAATCCAGTAAATAGTGATGTGCAGATAGATATACATGGTGAAGAAGAACCAATTCCGCATTTAACTTCCAATACTCCACCCTATTTCT
CAAAGCATTTACAACATGAAATTCATGAAGAGCTTTAATTTGCAGAAATAGAAATTATGTAAGTGCATTTGATGAATGCAATTAAGTTAGTGTGCCTGTAGATTCTTGAAGGCCATCCTTATCATTGCATCATCATAATCCCTCCACCCTATTGGCCTTTGATTTCATGAAAATAAATGTAATTGCAGTGATGTCTAATA
TTGTAATATTAGATTAACAAGATTCAGACTTCAAGTATCGTATATATGTAAATTTATTAAATCCATTAGAAAAATAATTATAATCATAAGAGGTTTGTTTAGGCTCC