NA ----> NA
Intron 1 GTCAGGACAT ... TGAATCACAG
| Sample | Retention score (%) | Exon junction reads | 5'ss reads | 3'ss reads |
| A1 | 29.86 | 20 | 9 | 8 |
| A2 | 27.19 | 17.5 | 3 | 10 |
| A3 | 46.37 | 22 | 11 | 27 |
| A4 | 7.69 | 12 | 0 | 2 |
| A5 | 38.75 | 9.5 | 7 | 5 |
| A6 | 5.88 | 8 | 0 | 1 |
| A7 | 26.84 | 31.5 | 5 | 18 |
| A8 | 26.61 | 14 | 1 | 9 |
| A9 | 23.98 | 36.5 | 11 | 12 |
| A10 | 27.24 | 55.5 | 27 | 14.5 |
>TRINITY_DN48733_c1_g4_i2 from sample A7 / Example spliced isoformCTCAAGGACATAATCCGCCACTAATCCATAGGCTGACTGAAAAATTTGTCACCCCATGAAATTTCTCTTGCCCTTAGACTACACTCTTTATATAAACACGGAATCTGCACATTTGAACCTCTTCTCTTTCAGAGGACTGCACATTTGAACCTCATTTGTTACTGTGAATTTAGGAGATTTGGTCCCTAACTAGGTTCACC
GACATCAAGCTATGAAGAATGGATACCAAGTACTCTGGCGCATAGATTAATGTACGGATTTAACTTGATGGAACACCGTCGGCGGCGACATTGATGCATACCTATGATCCTCGTATGACGTGACCTGACCGCCATGAATAACTTCGACACCAAGTTATGTACTGCAATGGCCCTGGATGTCAGCGATTCTATATATACAG
TACATCTACATTCGGACTTCTTGACAGCAAGCGCGTCAATCCCTTCGAATGCTTTAGGACACATTCATCAGGCTCAGTGGACTGTGGGAGCCTCGCATCATCCATCATGATCATTACTTTGAAGTGAGATCAATCTCCTCGAAGGTGTTTTTCCATTCCATTCTCATATCCTCGGTACCATTGCACAGGAGTTGAGACTC
GGAAGAATATGGAGTTAAGAGCAGCAGGAAAAGCAACAGTATGGTGGGATATGGAGAGCTGCCCCTTGCCTCCTTCATTCCACCCTTACATCGTCACTTCCATGGGCCCCGCTTTACTCCACAAATTCAACATCATGGATGTTAATACAGGACGCGATGGTTGCAGATCGCTTAATGACTTTCACTTCTCTGCTTATGAA
TTCTTCTCTCCGGTTGACACGGAGCTTTATCAAACAATCTTTAACTCTGGAATCCGACTGCACCAACTCCCTCCAGGCAATAGAAATGAAATGGAGAAAATGATGATCGCGGATGTTCTTCTGTGGGCGATGGACACGCCACCACCGGCAGATATTATCTTCATCGTTGGTAGCGTGGATTTCTGTCACTTGTTTCAGAA
GCTCCGGCAGAGATCATATAATGTCTTCTTGGTCTGCCAGTCTGTGAGTGAAATGACTCAAGACAGGTTGGGTGGGGTTA
>TRINITY_DN48733_c1_g4_i3 from sample A7 / Example unspliced isoform:CTCAAGGACATAATCCGCCACTAATCCATAGGCTGACTGAAAAATTTGTCACCCCATGAAATTTCTCTTGCCCTTAGACTACACTCTTTATATAAACACGGAATCTGCACATTTGAACCTCTTCTCTTTCAGAGGACTGCACATTTGAACCTCATTTGTTACTGTGAATTTAGGAGATTTGGTCCCTAACTAGGTTCACC
GACATCAAGCTATGAAGAATGGATACCAAGTACTCTGGCGCATAGATTAATGTACGGATTTAACTTGATGGAACACCGTCGGCGGCGACATTGATGCATACCTATGATCCTCGTATGACGTGACCTGACCGCCATGAATAACTTCGACACCAAGTTATGTACTGCAATGGCCCTGGATGTCAGCGATTCTATATATACAG
TACATCTACATTCGGACTTCTTGACAGCAAGCGCGTCAATCCCTTCGAATGCTTTAGGACACATTCATCAGGCTCAGTGGACTGTGGGAGCCTCGCATCATCCATCATGATCATTACTTTGAAGTGAGATCAATCTCCTCGAAGGTGTTTTTCCATTCCATTCTCATATCCTCGGTACCATTGCACAGGAGTTGAGACTC
GGAAGAATATGGAGTTAAGAGCAGCAGGAAAAGCAACAGTATGGTGGGATATGGAGAGCTGCCCCTTGCCTCCTTCATTCCACCCTTACATCGTCACTTCCATGGGCCCCGCTTTACTCCACAAATTCAACATCATGGATGTTAATACAGGACGCGATGGTTGCAGATCGCTTAATGACTTTCACTTCTCTGCTTATGAA
TTCTTCTCTCCGGTTGACACGGAGCTTTATCAAACAATCTTTAACTCTGGAATCCGACTGCACCAACTCCCTCCAGgtcaggacattcattgccctagcttttcttactctctttaactaaccctacagtccataattgaaattttcaaatttgtgttaaattcatctggaaacagttccctgcccctgctatctttttc
agttgcaagtagttcttcagcaaatggcattcgtctcgcttgatttagatcgtctttgcccttattttcgtgggatttctttgggtgttgatttgaaccttttcttgattttttcggtgtggtattcgtcatgagattgccctgtgttatgaatcacagGCAATAGAAATGAAATGGAGAAAATGATGATCGCGGATGTT
CTTCTGTGGGCGATGGACACGCCACCACCGGCAGATATTATCTTCATCGTTGGTAGCGTGGATTTCTGTCACTTGTTTCAGAAGCTCCGGCAGAGATCATATAATGTCTTCTTGGTCTGCCAGTCTGTGAGTGAAATGACTCAAGACAGGTTGGGTGGGGTTA